RNA–Protein interactions for RNA: ENST00000310833.11

CD34-201, Transcript of CD34 molecule, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CD34, Length 8,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD34-201ENST00000310833 ATP6V1DQ9Y5K8 247 aa14.02□□□□□ -0.17
CD34-201ENST00000310833 TMF1P82094 1093 aa14.02□□□□□ -0.17
CD34-201ENST00000310833 NOM1Q5C9Z4 860 aaKnown RBP14.02□□□□□ -0.17
CD34-201ENST00000310833 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
CD34-201ENST00000310833 TPM1P09493 284 aa14.01□□□□□ -0.17
CD34-201ENST00000310833 SKOR2Q2VWA4 1001 aaPredicted RBP14.01□□□□□ -0.17
CD34-201ENST00000310833 ZCCHC6Q5VYS8 1495 aaKnown RBP14.01□□□□□ -0.17
CD34-201ENST00000310833 PLEKHD1A6NEE1 506 aa14.01□□□□□ -0.17
CD34-201ENST00000310833 TPM2P07951 284 aa14□□□□□ -0.17
CD34-201ENST00000310833 ANO8Q9HCE9 1232 aaPredicted RBP14□□□□□ -0.17
CD34-201ENST00000310833 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
CD34-201ENST00000310833 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
CD34-201ENST00000310833 MTERF4Q7Z6M4 381 aaKnown RBP13.98□□□□□ -0.17
CD34-201ENST00000310833 TMX4Q9H1E5 349 aaPredicted RBP13.98□□□□□ -0.17
CD34-201ENST00000310833 CDR1P51861 262 aa13.97□□□□□ -0.17
CD34-201ENST00000310833 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
CD34-201ENST00000310833 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
CD34-201ENST00000310833 TPRNQ4KMQ1 711 aa13.97□□□□□ -0.17
CD34-201ENST00000310833 HMMRO75330 724 aa13.97□□□□□ -0.17
CD34-201ENST00000310833 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
CD34-201ENST00000310833 EIF3AQ14152 1382 aaKnown RBP13.97□□□□□ -0.17
CD34-201ENST00000310833 POGKQ9P215 609 aa13.97□□□□□ -0.17
CD34-201ENST00000310833 ST18O60284 1047 aa13.96□□□□□ -0.17
CD34-201ENST00000310833 ZBTB7CA1YPR0 619 aa13.96□□□□□ -0.17
CD34-201ENST00000310833 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.17
CD34-201ENST00000310833 KIF16BQ96L93 1317 aa13.96□□□□□ -0.18
CD34-201ENST00000310833 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.18
CD34-201ENST00000310833 RRP12Q5JTH9 1297 aaKnown RBP13.95□□□□□ -0.18
CD34-201ENST00000310833 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
CD34-201ENST00000310833 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
CD34-201ENST00000310833 KIF27Q86VH2 1401 aa13.93□□□□□ -0.18
CD34-201ENST00000310833 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
CD34-201ENST00000310833 PRM3Q9NNZ6 103 aa13.92□□□□□ -0.18
CD34-201ENST00000310833 RALBP1Q15311 655 aa13.92□□□□□ -0.18
CD34-201ENST00000310833 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
CD34-201ENST00000310833 SPAG9O60271 1321 aaKnown RBP13.91□□□□□ -0.18
CD34-201ENST00000310833 GOLGA6L19H0YKK7 550 aa13.9□□□□□ -0.18
CD34-201ENST00000310833 MAP7D2Q96T17 732 aa13.89□□□□□ -0.19
CD34-201ENST00000310833 ROCK2O75116 1388 aaKnown RBP13.89□□□□□ -0.19
CD34-201ENST00000310833 CFDP1Q9UEE9 299 aaPredicted RBP13.89□□□□□ -0.19
CD34-201ENST00000310833 IPO7O95373 1038 aaKnown RBP13.89□□□□□ -0.19
CD34-201ENST00000310833 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
CD34-201ENST00000310833 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
CD34-201ENST00000310833 AK7Q96M32 723 aa13.88□□□□□ -0.19
CD34-201ENST00000310833 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
CD34-201ENST00000310833 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
CD34-201ENST00000310833 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
CD34-201ENST00000310833 RRP7BPQ9NSQ0 103 aa13.87□□□□□ -0.19
CD34-201ENST00000310833 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
CD34-201ENST00000310833 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
CD34-201ENST00000310833 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
CD34-201ENST00000310833 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
CD34-201ENST00000310833 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
CD34-201ENST00000310833 RDXP35241 583 aaKnown RBP13.85□□□□□ -0.19
CD34-201ENST00000310833 RASSF8Q8NHQ8 419 aa13.85□□□□□ -0.19
CD34-201ENST00000310833 TPD52L1Q16890 204 aaPredicted RBP13.85□□□□□ -0.19
CD34-201ENST00000310833 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
CD34-201ENST00000310833 MYO6Q9UM54 1294 aa13.85□□□□□ -0.19
CD34-201ENST00000310833 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
CD34-201ENST00000310833 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
CD34-201ENST00000310833 DHX8Q14562 1220 aaKnown RBP13.84□□□□□ -0.19
CD34-201ENST00000310833 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
CD34-201ENST00000310833 HDGFL2Q7Z4V5 671 aaPredicted RBP13.84□□□□□ -0.19
CD34-201ENST00000310833 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
CD34-201ENST00000310833 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
CD34-201ENST00000310833 MORC1Q86VD1 984 aa13.83□□□□□ -0.2
CD34-201ENST00000310833 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
CD34-201ENST00000310833 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.2
CD34-201ENST00000310833 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
CD34-201ENST00000310833 ARHGAP35Q9NRY4 1499 aa13.82□□□□□ -0.2
CD34-201ENST00000310833 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
CD34-201ENST00000310833 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
CD34-201ENST00000310833 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
CD34-201ENST00000310833 CCDC191Q8NCU4 936 aa13.81□□□□□ -0.2
CD34-201ENST00000310833 ZNF771Q7L3S4 317 aaPredicted RBP13.81□□□□□ -0.2
CD34-201ENST00000310833 GORABQ5T7V8 394 aa13.81□□□□□ -0.2
CD34-201ENST00000310833 WWC1Q8IX03 1113 aa13.81□□□□□ -0.2
CD34-201ENST00000310833 RUFY1Q96T51 708 aa13.81□□□□□ -0.2
CD34-201ENST00000310833 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
CD34-201ENST00000310833 NACADO15069 1562 aa13.8□□□□□ -0.2
CD34-201ENST00000310833 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
CD34-201ENST00000310833 ERCC4Q92889 916 aaPredicted RBP13.79□□□□□ -0.2
CD34-201ENST00000310833 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
CD34-201ENST00000310833 BECN2A8MW95 431 aa13.79□□□□□ -0.2
CD34-201ENST00000310833 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
CD34-201ENST00000310833 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
CD34-201ENST00000310833 CCDC66A2RUB6 948 aa13.78□□□□□ -0.2
CD34-201ENST00000310833 H3BQV1 296 aa13.77□□□□□ -0.2
CD34-201ENST00000310833 IFFO2Q5TF58 517 aa13.77□□□□□ -0.2
CD34-201ENST00000310833 ZRSR2Q15696 482 aaKnown RBP13.77□□□□□ -0.2
CD34-201ENST00000310833 NGEFQ8N5V2 710 aa13.77□□□□□ -0.2
CD34-201ENST00000310833 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.21
CD34-201ENST00000310833 HSP90B2PQ58FF3 399 aa13.77□□□□□ -0.21
CD34-201ENST00000310833 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
CD34-201ENST00000310833 ROCK1Q13464 1354 aa13.76□□□□□ -0.21
CD34-201ENST00000310833 CAGE1Q8TC20 777 aa13.76□□□□□ -0.21
CD34-201ENST00000310833 ITPRIPQ8IWB1 547 aa13.76□□□□□ -0.21
CD34-201ENST00000310833 AKAP17AQ02040 695 aaKnown RBP13.76□□□□□ -0.21
CD34-201ENST00000310833 CCDC173Q0VFZ6 552 aa13.75□□□□□ -0.21
CD34-201ENST00000310833 CCP110O43303 1012 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms