RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 ANP32CO43423 234 aa21.49■■□□□ 1.03
SPIRE1-201ENST00000309836 TROQ12816 1431 aaPredicted RBP21.48■■□□□ 1.03
SPIRE1-201ENST00000309836 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
SPIRE1-201ENST00000309836 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.03
SPIRE1-201ENST00000309836 ADCY10Q96PN6 1610 aa21.45■■□□□ 1.02
SPIRE1-201ENST00000309836 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
SPIRE1-201ENST00000309836 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 NUP160Q12769 1436 aa21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 KIF14Q15058 1648 aa21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 ANKRD30BQ9BXX2 1392 aa21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 CAMSAP2Q08AD1 1489 aa21.43■■□□□ 1.02
SPIRE1-201ENST00000309836 L3MBTL2Q969R5 705 aa21.4■■□□□ 1.02
SPIRE1-201ENST00000309836 RPRD2Q5VT52 1461 aaKnown RBP21.4■■□□□ 1.02
SPIRE1-201ENST00000309836 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.02
SPIRE1-201ENST00000309836 ADGBQ8N7X0 1667 aa21.39■■□□□ 1.02
SPIRE1-201ENST00000309836 TEX14Q8IWB6 1497 aa21.38■■□□□ 1.01
SPIRE1-201ENST00000309836 WASHC2AQ641Q2 1341 aa21.38■■□□□ 1.01
SPIRE1-201ENST00000309836 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
SPIRE1-201ENST00000309836 CARMIL2Q6F5E8 1435 aa21.36■■□□□ 1.01
SPIRE1-201ENST00000309836 PZPP20742 1482 aa21.35■■□□□ 1.01
SPIRE1-201ENST00000309836 FBLN2P98095 1184 aa21.34■■□□□ 1.01
SPIRE1-201ENST00000309836 CFDP1Q9UEE9 299 aaPredicted RBP21.34■■□□□ 1.01
SPIRE1-201ENST00000309836 ADGRL2O95490 1459 aa21.34■■□□□ 1.01
SPIRE1-201ENST00000309836 ABCA8O94911 1581 aa21.34■■□□□ 1.01
SPIRE1-201ENST00000309836 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.01
SPIRE1-201ENST00000309836 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
SPIRE1-201ENST00000309836 NCOA1Q15788 1441 aa21.33■■□□□ 1
SPIRE1-201ENST00000309836 NBPF8Q3BBV2 869 aa21.3■■□□□ 1
SPIRE1-201ENST00000309836 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
SPIRE1-201ENST00000309836 CNTLNQ9NXG0 1405 aa21.28■■□□□ 1
SPIRE1-201ENST00000309836 CDC42BPAQ5VT25 1732 aa21.28■■□□□ 1
SPIRE1-201ENST00000309836 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
SPIRE1-201ENST00000309836 ATP10BO94823 1461 aa21.25■□□□□ 0.99
SPIRE1-201ENST00000309836 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
SPIRE1-201ENST00000309836 FKBP8Q14318 412 aa21.25■□□□□ 0.99
SPIRE1-201ENST00000309836 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
SPIRE1-201ENST00000309836 CCDC7Q96M83 1385 aa21.25■□□□□ 0.99
SPIRE1-201ENST00000309836 SPATA31E1Q6ZUB1 1445 aa21.23■□□□□ 0.99
SPIRE1-201ENST00000309836 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
SPIRE1-201ENST00000309836 KIAA1107Q9UPP5 1409 aa21.22■□□□□ 0.99
SPIRE1-201ENST00000309836 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
SPIRE1-201ENST00000309836 BCANQ96GW7 911 aa21.21■□□□□ 0.99
SPIRE1-201ENST00000309836 POLR1AO95602 1720 aaPredicted RBP21.21■□□□□ 0.99
SPIRE1-201ENST00000309836 SHANK2Q9UPX8 1470 aa21.2■□□□□ 0.98
SPIRE1-201ENST00000309836 TSHZ2Q9NRE2 1034 aa21.19■□□□□ 0.98
SPIRE1-201ENST00000309836 PLEKHD1A6NEE1 506 aa21.18■□□□□ 0.98
SPIRE1-201ENST00000309836 ANKRD50Q9ULJ7 1429 aa21.17■□□□□ 0.98
SPIRE1-201ENST00000309836 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
SPIRE1-201ENST00000309836 PKD2Q13563 968 aa21.14■□□□□ 0.97
SPIRE1-201ENST00000309836 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.97
SPIRE1-201ENST00000309836 NEFLP07196 543 aa21.13■□□□□ 0.97
SPIRE1-201ENST00000309836 HNRNPUQ00839 825 aaKnown RBP eCLIP21.12■□□□□ 0.97
SPIRE1-201ENST00000309836 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
SPIRE1-201ENST00000309836 KDM5DQ9BY66 1539 aa21.12■□□□□ 0.97
SPIRE1-201ENST00000309836 ARHGEF5Q12774 1597 aa21.12■□□□□ 0.97
SPIRE1-201ENST00000309836 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
SPIRE1-201ENST00000309836 PTPRGP23470 1445 aa21.09■□□□□ 0.97
SPIRE1-201ENST00000309836 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
SPIRE1-201ENST00000309836 SAMD9LQ8IVG5 1584 aa21.07■□□□□ 0.96
SPIRE1-201ENST00000309836 NUP155O75694 1391 aa21.07■□□□□ 0.96
SPIRE1-201ENST00000309836 PREX2Q70Z35 1606 aa21.06■□□□□ 0.96
SPIRE1-201ENST00000309836 CHD1O14646 1710 aa21.06■□□□□ 0.96
SPIRE1-201ENST00000309836 KDM5CP41229 1560 aa21.06■□□□□ 0.96
SPIRE1-201ENST00000309836 CDC42BPBQ9Y5S2 1711 aa21.05■□□□□ 0.96
SPIRE1-201ENST00000309836 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
SPIRE1-201ENST00000309836 USP47Q96K76 1375 aa21.04■□□□□ 0.96
SPIRE1-201ENST00000309836 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
SPIRE1-201ENST00000309836 HNRNPMP52272 730 aaKnown RBP eCLIP21.03■□□□□ 0.96
SPIRE1-201ENST00000309836 ARHGEF12Q9NZN5 1544 aa21.02■□□□□ 0.96
SPIRE1-201ENST00000309836 CCDC141Q6ZP82 1450 aa21.01■□□□□ 0.95
SPIRE1-201ENST00000309836 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
SPIRE1-201ENST00000309836 TSPY4P0CV99 314 aa21.01■□□□□ 0.95
SPIRE1-201ENST00000309836 TSPY10P0CW01 314 aa21.01■□□□□ 0.95
SPIRE1-201ENST00000309836 SHROOM2Q13796 1616 aa21.01■□□□□ 0.95
SPIRE1-201ENST00000309836 ZNF326Q5BKZ1 582 aaKnown RBP21■□□□□ 0.95
SPIRE1-201ENST00000309836 DHX29Q7Z478 1369 aaKnown RBP21■□□□□ 0.95
SPIRE1-201ENST00000309836 MRS2Q9HD23 443 aa20.98■□□□□ 0.95
SPIRE1-201ENST00000309836 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
SPIRE1-201ENST00000309836 MAST1Q9Y2H9 1570 aa20.94■□□□□ 0.94
SPIRE1-201ENST00000309836 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
SPIRE1-201ENST00000309836 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
SPIRE1-201ENST00000309836 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
SPIRE1-201ENST00000309836 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
SPIRE1-201ENST00000309836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.94
SPIRE1-201ENST00000309836 ARID4BQ4LE39 1312 aaPredicted RBP20.91■□□□□ 0.94
SPIRE1-201ENST00000309836 UNC13BO14795 1591 aa20.91■□□□□ 0.94
SPIRE1-201ENST00000309836 ZBED9Q6R2W3 1325 aa20.9■□□□□ 0.94
SPIRE1-201ENST00000309836 ARHGAP5Q13017 1502 aa20.9■□□□□ 0.94
SPIRE1-201ENST00000309836 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
SPIRE1-201ENST00000309836 MYT1Q01538 1121 aa20.89■□□□□ 0.93
SPIRE1-201ENST00000309836 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
SPIRE1-201ENST00000309836 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
SPIRE1-201ENST00000309836 CARD11Q9BXL7 1154 aa20.87■□□□□ 0.93
SPIRE1-201ENST00000309836 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
SPIRE1-201ENST00000309836 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
SPIRE1-201ENST00000309836 PLXNC1O60486 1568 aa20.86■□□□□ 0.93
SPIRE1-201ENST00000309836 KDM2AQ9Y2K7 1162 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms