RNA–Protein interactions for RNA: ENST00000308696.10

PSMD1-201, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMD1, Length 3,326 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-201ENST00000308696 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.2
PSMD1-201ENST00000308696 WDR62O43379 1518 aa16.33■□□□□ 0.2
PSMD1-201ENST00000308696 FKBP8Q14318 412 aa16.32■□□□□ 0.2
PSMD1-201ENST00000308696 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
PSMD1-201ENST00000308696 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
PSMD1-201ENST00000308696 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
PSMD1-201ENST00000308696 DAPK1P53355 1430 aa16.3■□□□□ 0.2
PSMD1-201ENST00000308696 ABCC5O15440 1437 aa16.3■□□□□ 0.2
PSMD1-201ENST00000308696 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
PSMD1-201ENST00000308696 NEFLP07196 543 aa16.29■□□□□ 0.2
PSMD1-201ENST00000308696 PKD2Q13563 968 aa16.29■□□□□ 0.2
PSMD1-201ENST00000308696 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
PSMD1-201ENST00000308696 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
PSMD1-201ENST00000308696 KDM2AQ9Y2K7 1162 aa16.28■□□□□ 0.2
PSMD1-201ENST00000308696 SYNJ2O15056 1496 aa16.27■□□□□ 0.2
PSMD1-201ENST00000308696 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.2
PSMD1-201ENST00000308696 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
PSMD1-201ENST00000308696 KDM6BO15054 1643 aa16.27■□□□□ 0.19
PSMD1-201ENST00000308696 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.19
PSMD1-201ENST00000308696 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.19
PSMD1-201ENST00000308696 TROQ12816 1431 aaPredicted RBP16.26■□□□□ 0.19
PSMD1-201ENST00000308696 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
PSMD1-201ENST00000308696 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
PSMD1-201ENST00000308696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.199e-7■■■□□ 17.7
PSMD1-201ENST00000308696 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
PSMD1-201ENST00000308696 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
PSMD1-201ENST00000308696 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
PSMD1-201ENST00000308696 PTPRGP23470 1445 aa16.2■□□□□ 0.18
PSMD1-201ENST00000308696 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
PSMD1-201ENST00000308696 NUP155O75694 1391 aa16.2■□□□□ 0.18
PSMD1-201ENST00000308696 ANKRD30BQ9BXX2 1392 aa16.2■□□□□ 0.18
PSMD1-201ENST00000308696 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
PSMD1-201ENST00000308696 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
PSMD1-201ENST00000308696 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
PSMD1-201ENST00000308696 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
PSMD1-201ENST00000308696 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
PSMD1-201ENST00000308696 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
PSMD1-201ENST00000308696 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
PSMD1-201ENST00000308696 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
PSMD1-201ENST00000308696 NCOA1Q15788 1441 aa16.16■□□□□ 0.18
PSMD1-201ENST00000308696 AKNAQ7Z591 1439 aa16.16■□□□□ 0.18
PSMD1-201ENST00000308696 MRS2Q9HD23 443 aa16.16■□□□□ 0.18
PSMD1-201ENST00000308696 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
PSMD1-201ENST00000308696 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
PSMD1-201ENST00000308696 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
PSMD1-201ENST00000308696 ATP10BO94823 1461 aa16.13■□□□□ 0.17
PSMD1-201ENST00000308696 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
PSMD1-201ENST00000308696 NUP160Q12769 1436 aa16.13■□□□□ 0.17
PSMD1-201ENST00000308696 KIF14Q15058 1648 aa16.11■□□□□ 0.17
PSMD1-201ENST00000308696 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
PSMD1-201ENST00000308696 KIF7Q2M1P5 1343 aa16.1■□□□□ 0.17
PSMD1-201ENST00000308696 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
PSMD1-201ENST00000308696 RPRD2Q5VT52 1461 aaKnown RBP16.09■□□□□ 0.17
PSMD1-201ENST00000308696 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
PSMD1-201ENST00000308696 KDM5BQ9UGL1 1544 aa16.09■□□□□ 0.17
PSMD1-201ENST00000308696 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
PSMD1-201ENST00000308696 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.16
PSMD1-201ENST00000308696 KIF15Q9NS87 1388 aa16.08■□□□□ 0.16
PSMD1-201ENST00000308696 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
PSMD1-201ENST00000308696 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
PSMD1-201ENST00000308696 MYT1Q01538 1121 aa16.05■□□□□ 0.16
PSMD1-201ENST00000308696 PZPP20742 1482 aa16.04■□□□□ 0.16
PSMD1-201ENST00000308696 USP47Q96K76 1375 aa16.03■□□□□ 0.16
PSMD1-201ENST00000308696 CNTLNQ9NXG0 1405 aa16.03■□□□□ 0.16
PSMD1-201ENST00000308696 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.15
PSMD1-201ENST00000308696 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
PSMD1-201ENST00000308696 TEX14Q8IWB6 1497 aa15.99■□□□□ 0.15
PSMD1-201ENST00000308696 TMC1Q8TDI8 760 aa15.96■□□□□ 0.15
PSMD1-201ENST00000308696 SALL2Q9Y467 1007 aaPredicted RBP15.96■□□□□ 0.15
PSMD1-201ENST00000308696 ITSN2Q9NZM3 1697 aa15.95■□□□□ 0.14
PSMD1-201ENST00000308696 ABCA8O94911 1581 aa15.95■□□□□ 0.14
PSMD1-201ENST00000308696 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
PSMD1-201ENST00000308696 ABCC10Q5T3U5 1492 aa15.95■□□□□ 0.14
PSMD1-201ENST00000308696 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
PSMD1-201ENST00000308696 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
PSMD1-201ENST00000308696 EFCAB2Q5VUJ9 269 aa15.93■□□□□ 0.14
PSMD1-201ENST00000308696 NBPF1Q3BBV0 1214 aa15.93■□□□□ 0.14
PSMD1-201ENST00000308696 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
PSMD1-201ENST00000308696 ADGRL2O95490 1459 aa15.92■□□□□ 0.14
PSMD1-201ENST00000308696 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
PSMD1-201ENST00000308696 SPATA31E1Q6ZUB1 1445 aa15.9■□□□□ 0.14
PSMD1-201ENST00000308696 CCDC141Q6ZP82 1450 aa15.89■□□□□ 0.13
PSMD1-201ENST00000308696 MBD5Q9P267 1494 aa15.88■□□□□ 0.13
PSMD1-201ENST00000308696 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
PSMD1-201ENST00000308696 CDC42BPAQ5VT25 1732 aa15.87■□□□□ 0.13
PSMD1-201ENST00000308696 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
PSMD1-201ENST00000308696 CC2D1BQ5T0F9 858 aaKnown RBP15.85■□□□□ 0.13
PSMD1-201ENST00000308696 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
PSMD1-201ENST00000308696 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
PSMD1-201ENST00000308696 B4GALNT3Q6L9W6 998 aa15.84■□□□□ 0.13
PSMD1-201ENST00000308696 ADCY10Q96PN6 1610 aa15.84■□□□□ 0.13
PSMD1-201ENST00000308696 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.12
PSMD1-201ENST00000308696 SHANK2Q9UPX8 1470 aa15.82■□□□□ 0.12
PSMD1-201ENST00000308696 ZBED9Q6R2W3 1325 aa15.81■□□□□ 0.12
PSMD1-201ENST00000308696 CHD1O14646 1710 aa15.81■□□□□ 0.12
PSMD1-201ENST00000308696 KIF3BO15066 747 aa15.81■□□□□ 0.12
PSMD1-201ENST00000308696 SAMD9LQ8IVG5 1584 aa15.8■□□□□ 0.12
PSMD1-201ENST00000308696 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
PSMD1-201ENST00000308696 FAM135AQ9P2D6 1515 aa15.79■□□□□ 0.12
PSMD1-201ENST00000308696 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms