RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CFAP53Q96M91 514 aa15.12■□□□□ 0.01
PCDHGC3-201ENST00000308177 SPAG9O60271 1321 aaKnown RBP15.11■□□□□ 0.01
PCDHGC3-201ENST00000308177 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
PCDHGC3-201ENST00000308177 ROCK2O75116 1388 aaKnown RBP15.1■□□□□ 0.01
PCDHGC3-201ENST00000308177 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
PCDHGC3-201ENST00000308177 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
PCDHGC3-201ENST00000308177 KIF3BO15066 747 aa15.09■□□□□ 0.01
PCDHGC3-201ENST00000308177 POGKQ9P215 609 aa15.09■□□□□ 0.01
PCDHGC3-201ENST00000308177 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
PCDHGC3-201ENST00000308177 NCOA2Q15596 1464 aa15.08■□□□□ 0
PCDHGC3-201ENST00000308177 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
PCDHGC3-201ENST00000308177 EFCAB5A4FU69 1503 aa15.06■□□□□ 0
PCDHGC3-201ENST00000308177 IFT140Q96RY7 1462 aa15.04■□□□□ -0
PCDHGC3-201ENST00000308177 TNNT2P45379 298 aaPredicted RBP15.03■□□□□ -0
PCDHGC3-201ENST00000308177 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
PCDHGC3-201ENST00000308177 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
PCDHGC3-201ENST00000308177 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
PCDHGC3-201ENST00000308177 MLECQ14165 292 aa15.03■□□□□ -0
PCDHGC3-201ENST00000308177 UACAQ9BZF9 1416 aa15.03■□□□□ -0
PCDHGC3-201ENST00000308177 PPP4R2Q9NY27 417 aa15.03■□□□□ -0
PCDHGC3-201ENST00000308177 NEUROD2Q15784 382 aa15.02□□□□□ -0.01
PCDHGC3-201ENST00000308177 PPM1GO15355 546 aaPredicted RBP15.02□□□□□ -0.01
PCDHGC3-201ENST00000308177 KTN1Q86UP2 1357 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-201ENST00000308177 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
PCDHGC3-201ENST00000308177 RALBP1Q15311 655 aa14.99□□□□□ -0.01
PCDHGC3-201ENST00000308177 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
PCDHGC3-201ENST00000308177 CCDC144AA2RUR9 1427 aa14.99□□□□□ -0.01
PCDHGC3-201ENST00000308177 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
PCDHGC3-201ENST00000308177 LAMC3Q9Y6N6 1575 aa14.99□□□□□ -0.01
PCDHGC3-201ENST00000308177 SAFB2Q14151 953 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDHGC3-201ENST00000308177 C14orf37Q86TY3 774 aa14.97□□□□□ -0.01
PCDHGC3-201ENST00000308177 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
PCDHGC3-201ENST00000308177 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.01
PCDHGC3-201ENST00000308177 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.02
PCDHGC3-201ENST00000308177 MORC1Q86VD1 984 aa14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 STK26Q9P289 416 aa14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 B4GALNT3Q6L9W6 998 aa14.94□□□□□ -0.02
PCDHGC3-201ENST00000308177 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
PCDHGC3-201ENST00000308177 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
PCDHGC3-201ENST00000308177 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
PCDHGC3-201ENST00000308177 ANKRD50Q9ULJ7 1429 aa14.92□□□□□ -0.02
PCDHGC3-201ENST00000308177 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
PCDHGC3-201ENST00000308177 PRG4Q92954 1404 aaPredicted RBP14.91□□□□□ -0.02
PCDHGC3-201ENST00000308177 EIF3AQ14152 1382 aaKnown RBP14.91□□□□□ -0.02
PCDHGC3-201ENST00000308177 USP47Q96K76 1375 aa14.91□□□□□ -0.02
PCDHGC3-201ENST00000308177 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
PCDHGC3-201ENST00000308177 HSP90AA1P07900 732 aaKnown RBP14.9□□□□□ -0.02
PCDHGC3-201ENST00000308177 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
PCDHGC3-201ENST00000308177 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
PCDHGC3-201ENST00000308177 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
PCDHGC3-201ENST00000308177 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
PCDHGC3-201ENST00000308177 NLRP13Q86W25 1043 aa14.89□□□□□ -0.03
PCDHGC3-201ENST00000308177 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
PCDHGC3-201ENST00000308177 KIAA0586Q9BVV6 1533 aa14.88□□□□□ -0.03
PCDHGC3-201ENST00000308177 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-201ENST00000308177 FTSJ3Q8IY81 847 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-201ENST00000308177 HFM1A2PYH4 1435 aa14.87□□□□□ -0.03
PCDHGC3-201ENST00000308177 FRAT1Q92837 279 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-201ENST00000308177 TROQ12816 1431 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-201ENST00000308177 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-201ENST00000308177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHGC3-201ENST00000308177 LAS1LQ9Y4W2 734 aaKnown RBP14.86□□□□□ -0.03
PCDHGC3-201ENST00000308177 CUL7Q14999 1698 aa14.86□□□□□ -0.03
PCDHGC3-201ENST00000308177 HECW1Q76N89 1606 aa14.85□□□□□ -0.03
PCDHGC3-201ENST00000308177 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
PCDHGC3-201ENST00000308177 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
PCDHGC3-201ENST00000308177 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
PCDHGC3-201ENST00000308177 NBR1Q14596 966 aa14.84□□□□□ -0.03
PCDHGC3-201ENST00000308177 NUTM2DQ5VT03 806 aaPredicted RBP14.84□□□□□ -0.03
PCDHGC3-201ENST00000308177 PCF11O94913 1555 aaKnown RBP14.84□□□□□ -0.03
PCDHGC3-201ENST00000308177 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.03
PCDHGC3-201ENST00000308177 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
PCDHGC3-201ENST00000308177 PANK3Q9H999 370 aa14.83□□□□□ -0.04
PCDHGC3-201ENST00000308177 IQGAP2Q13576 1575 aa14.82□□□□□ -0.04
PCDHGC3-201ENST00000308177 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
PCDHGC3-201ENST00000308177 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
PCDHGC3-201ENST00000308177 RCAN3Q9UKA8 241 aa14.82□□□□□ -0.04
PCDHGC3-201ENST00000308177 MYBBP1AQ9BQG0 1328 aaKnown RBP14.81□□□□□ -0.04
PCDHGC3-201ENST00000308177 CDK13Q14004 1512 aaKnown RBP14.8□□□□□ -0.04
PCDHGC3-201ENST00000308177 CCDC7Q96M83 1385 aa14.8□□□□□ -0.04
PCDHGC3-201ENST00000308177 AFAP1Q8N556 730 aa14.8□□□□□ -0.04
PCDHGC3-201ENST00000308177 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
PCDHGC3-201ENST00000308177 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
PCDHGC3-201ENST00000308177 RGS3P49796 1198 aa14.79□□□□□ -0.04
PCDHGC3-201ENST00000308177 ARHGAP5Q13017 1502 aa14.79□□□□□ -0.04
PCDHGC3-201ENST00000308177 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-201ENST00000308177 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGC3-201ENST00000308177 DDRGK1Q96HY6 314 aa14.79□□□□□ -0.04
PCDHGC3-201ENST00000308177 MS4A1P11836 297 aa14.78□□□□□ -0.04
PCDHGC3-201ENST00000308177 NAIPQ13075 1403 aa14.78□□□□□ -0.04
PCDHGC3-201ENST00000308177 C9orf84Q5VXU9 1444 aa14.77□□□□□ -0.04
PCDHGC3-201ENST00000308177 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.04
PCDHGC3-201ENST00000308177 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
PCDHGC3-201ENST00000308177 WASHC2AQ641Q2 1341 aa14.76□□□□□ -0.05
PCDHGC3-201ENST00000308177 DAPK1P53355 1430 aa14.76□□□□□ -0.05
PCDHGC3-201ENST00000308177 SOX12O15370 315 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms