RNA–Protein interactions for RNA: ENST00000307486.12

C2orf54-201, Transcript of Uncharacterized protein C2orf54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C2orf54, Length 2,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf54-201ENST00000307486 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
C2orf54-201ENST00000307486 TRIM52Q96A61 297 aa28.24■■■□□ 2.11
C2orf54-201ENST00000307486 KIF14Q15058 1648 aa28.23■■■□□ 2.11
C2orf54-201ENST00000307486 DENND4BO75064 1496 aaPredicted RBP28.19■■■□□ 2.1
C2orf54-201ENST00000307486 CAMSAP2Q08AD1 1489 aa28.19■■■□□ 2.1
C2orf54-201ENST00000307486 GPATCH8Q9UKJ3 1502 aaKnown RBP28.19■■■□□ 2.1
C2orf54-201ENST00000307486 GTF3C3Q9Y5Q9 886 aa28.19■■■□□ 2.1
C2orf54-201ENST00000307486 CFDP1Q9UEE9 299 aaPredicted RBP28.18■■■□□ 2.1
C2orf54-201ENST00000307486 CHD1O14646 1710 aa28.16■■■□□ 2.1
C2orf54-201ENST00000307486 ATP10BO94823 1461 aa28.13■■■□□ 2.09
C2orf54-201ENST00000307486 MPHOSPH9Q99550 1183 aa28.13■■■□□ 2.09
C2orf54-201ENST00000307486 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
C2orf54-201ENST00000307486 KDM5BQ9UGL1 1544 aa28.1■■■□□ 2.09
C2orf54-201ENST00000307486 ADGBQ8N7X0 1667 aa28.09■■■□□ 2.09
C2orf54-201ENST00000307486 PTPRGP23470 1445 aa28.08■■■□□ 2.09
C2orf54-201ENST00000307486 ZNF777Q9ULD5 760 aaPredicted RBP28.07■■■□□ 2.08
C2orf54-201ENST00000307486 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
C2orf54-201ENST00000307486 CDC42BPAQ5VT25 1732 aa28.06■■■□□ 2.08
C2orf54-201ENST00000307486 ABCC10Q5T3U5 1492 aa28.05■■■□□ 2.08
C2orf54-201ENST00000307486 DDX10Q13206 875 aaKnown RBP28.04■■■□□ 2.08
C2orf54-201ENST00000307486 HIRIP3Q9BW71 556 aaPredicted RBP28.04■■■□□ 2.08
C2orf54-201ENST00000307486 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
C2orf54-201ENST00000307486 ADGRL2O95490 1459 aa28.01■■■□□ 2.07
C2orf54-201ENST00000307486 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
C2orf54-201ENST00000307486 FOXD1Q16676 465 aa27.98■■■□□ 2.07
C2orf54-201ENST00000307486 ANKRD30BQ9BXX2 1392 aa27.95■■■□□ 2.07
C2orf54-201ENST00000307486 ANKRD30AQ9BXX3 1397 aa27.95■■■□□ 2.06
C2orf54-201ENST00000307486 SLC4A1APQ9BWU0 796 aaKnown RBP27.94■■■□□ 2.06
C2orf54-201ENST00000307486 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
C2orf54-201ENST00000307486 RPRD2Q5VT52 1461 aaKnown RBP27.91■■■□□ 2.06
C2orf54-201ENST00000307486 PZPP20742 1482 aa27.9■■■□□ 2.06
C2orf54-201ENST00000307486 L3MBTL2Q969R5 705 aa27.87■■■□□ 2.05
C2orf54-201ENST00000307486 C9orf84Q5VXU9 1444 aa27.86■■■□□ 2.05
C2orf54-201ENST00000307486 ANKRD50Q9ULJ7 1429 aa27.85■■■□□ 2.05
C2orf54-201ENST00000307486 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
C2orf54-201ENST00000307486 PREX2Q70Z35 1606 aa27.83■■■□□ 2.05
C2orf54-201ENST00000307486 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
C2orf54-201ENST00000307486 TEX14Q8IWB6 1497 aa27.82■■■□□ 2.04
C2orf54-201ENST00000307486 CDC42BPBQ9Y5S2 1711 aa27.81■■■□□ 2.04
C2orf54-201ENST00000307486 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
C2orf54-201ENST00000307486 TSPY4P0CV99 314 aa27.8■■■□□ 2.04
C2orf54-201ENST00000307486 TSPY10P0CW01 314 aa27.8■■■□□ 2.04
C2orf54-201ENST00000307486 KCNH8Q96L42 1107 aa27.8■■■□□ 2.04
C2orf54-201ENST00000307486 KIAA1107Q9UPP5 1409 aa27.78■■■□□ 2.04
C2orf54-201ENST00000307486 SAMD9LQ8IVG5 1584 aa27.78■■■□□ 2.04
C2orf54-201ENST00000307486 ANP32CO43423 234 aa27.77■■■□□ 2.04
C2orf54-201ENST00000307486 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
C2orf54-201ENST00000307486 MBD5Q9P267 1494 aa27.77■■■□□ 2.04
C2orf54-201ENST00000307486 HNRNPMP52272 730 aaKnown RBP eCLIP27.77■■■□□ 2.04
C2orf54-201ENST00000307486 CLASP1Q7Z460 1538 aa27.76■■■□□ 2.03
C2orf54-201ENST00000307486 EIF4G2P78344 907 aaKnown RBP eCLIP27.75■■■□□ 2.03
C2orf54-201ENST00000307486 CCDC141Q6ZP82 1450 aa27.74■■■□□ 2.03
C2orf54-201ENST00000307486 TTC37Q6PGP7 1564 aa27.73■■■□□ 2.03
C2orf54-201ENST00000307486 PKD2Q13563 968 aa27.72■■■□□ 2.03
C2orf54-201ENST00000307486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.03
C2orf54-201ENST00000307486 KIF15Q9NS87 1388 aa27.71■■■□□ 2.03
C2orf54-201ENST00000307486 CCER2I3L3R5 266 aa27.7■■■□□ 2.03
C2orf54-201ENST00000307486 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
C2orf54-201ENST00000307486 NUP155O75694 1391 aa27.69■■■□□ 2.02
C2orf54-201ENST00000307486 NBPF8Q3BBV2 869 aa27.68■■■□□ 2.02
C2orf54-201ENST00000307486 RSPH4AQ5TD94 716 aa27.68■■■□□ 2.02
C2orf54-201ENST00000307486 KDM5DQ9BY66 1539 aa27.68■■■□□ 2.02
C2orf54-201ENST00000307486 WASHC2AQ641Q2 1341 aa27.66■■■□□ 2.02
C2orf54-201ENST00000307486 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
C2orf54-201ENST00000307486 SYCP2Q9BX26 1530 aa27.65■■■□□ 2.02
C2orf54-201ENST00000307486 ZCCHC11Q5TAX3 1644 aaKnown RBP27.63■■■□□ 2.01
C2orf54-201ENST00000307486 UHRF1BP1LA0JNW5 1464 aa27.62■■■□□ 2.01
C2orf54-201ENST00000307486 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
C2orf54-201ENST00000307486 PLEKHH2Q8IVE3 1493 aa27.58■■■□□ 2.01
C2orf54-201ENST00000307486 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
C2orf54-201ENST00000307486 CCDC7Q96M83 1385 aa27.52■■■□□ 2
C2orf54-201ENST00000307486 CNTLNQ9NXG0 1405 aa27.52■■■□□ 2
C2orf54-201ENST00000307486 FAM135AQ9P2D6 1515 aa27.51■■□□□ 1.99
C2orf54-201ENST00000307486 PLXNC1O60486 1568 aa27.5■■□□□ 1.99
C2orf54-201ENST00000307486 PLCH2O75038 1416 aa27.5■■□□□ 1.99
C2orf54-201ENST00000307486 C11orf95C9JLR9 678 aaPredicted RBP27.5■■□□□ 1.99
C2orf54-201ENST00000307486 POLR1AO95602 1720 aaPredicted RBP27.49■■□□□ 1.99
C2orf54-201ENST00000307486 ARHGEF12Q9NZN5 1544 aa27.47■■□□□ 1.99
C2orf54-201ENST00000307486 ZNF326Q5BKZ1 582 aaKnown RBP27.46■■□□□ 1.99
C2orf54-201ENST00000307486 UNC13BO14795 1591 aa27.46■■□□□ 1.99
C2orf54-201ENST00000307486 UHRF1BP1Q6BDS2 1440 aa27.44■■□□□ 1.98
C2orf54-201ENST00000307486 EFCAB2Q5VUJ9 269 aa27.43■■□□□ 1.98
C2orf54-201ENST00000307486 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
C2orf54-201ENST00000307486 ABCC1P33527 1531 aa27.41■■□□□ 1.98
C2orf54-201ENST00000307486 KIF7Q2M1P5 1343 aa27.41■■□□□ 1.98
C2orf54-201ENST00000307486 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
C2orf54-201ENST00000307486 USP47Q96K76 1375 aa27.4■■□□□ 1.98
C2orf54-201ENST00000307486 RALGAPBQ86X10 1494 aa27.39■■□□□ 1.98
C2orf54-201ENST00000307486 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
C2orf54-201ENST00000307486 KDM5CP41229 1560 aa27.38■■□□□ 1.97
C2orf54-201ENST00000307486 IQGAP3Q86VI3 1631 aa27.36■■□□□ 1.97
C2orf54-201ENST00000307486 ERBINQ96RT1 1412 aa27.36■■□□□ 1.97
C2orf54-201ENST00000307486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.34■■□□□ 1.97
C2orf54-201ENST00000307486 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
C2orf54-201ENST00000307486 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.97
C2orf54-201ENST00000307486 WDR7Q9Y4E6 1490 aa27.32■■□□□ 1.96
C2orf54-201ENST00000307486 TRAPPC8Q9Y2L5 1435 aa27.32■■□□□ 1.96
C2orf54-201ENST00000307486 DCAF11Q8TEB1 546 aa27.31■■□□□ 1.96
C2orf54-201ENST00000307486 BCORL1Q5H9F3 1711 aa27.31■■□□□ 1.96
C2orf54-201ENST00000307486 KDM2AQ9Y2K7 1162 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms