RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NUP153P49790 1475 aaKnown RBP21.1■□□□□ 0.97
CSDC2-201ENST00000306149 FBLN2P98095 1184 aa21.09■□□□□ 0.97
CSDC2-201ENST00000306149 ABCC5O15440 1437 aa21.09■□□□□ 0.97
CSDC2-201ENST00000306149 HNRNPUQ00839 825 aaKnown RBP eCLIP21.09■□□□□ 0.97
CSDC2-201ENST00000306149 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
CSDC2-201ENST00000306149 KIAA0556O60303 1618 aa21.08■□□□□ 0.96
CSDC2-201ENST00000306149 NBPF8Q3BBV2 869 aa21.08■□□□□ 0.96
CSDC2-201ENST00000306149 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
CSDC2-201ENST00000306149 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
CSDC2-201ENST00000306149 PRG4Q92954 1404 aaPredicted RBP21.05■□□□□ 0.96
CSDC2-201ENST00000306149 CCDC184Q52MB2 194 aa21.05■□□□□ 0.96
CSDC2-201ENST00000306149 ANKRD30BQ9BXX2 1392 aa21.04■□□□□ 0.96
CSDC2-201ENST00000306149 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
CSDC2-201ENST00000306149 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
CSDC2-201ENST00000306149 CFDP1Q9UEE9 299 aaPredicted RBP21.02■□□□□ 0.96
CSDC2-201ENST00000306149 RAPGEF6Q8TEU7 1601 aa21.01■□□□□ 0.95
CSDC2-201ENST00000306149 ROCK1Q13464 1354 aa21.01■□□□□ 0.95
CSDC2-201ENST00000306149 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
CSDC2-201ENST00000306149 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
CSDC2-201ENST00000306149 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
CSDC2-201ENST00000306149 IRX6P78412 446 aaPredicted RBP20.99■□□□□ 0.95
CSDC2-201ENST00000306149 RPRD2Q5VT52 1461 aaKnown RBP20.98■□□□□ 0.95
CSDC2-201ENST00000306149 CCDC7Q96M83 1385 aa20.96■□□□□ 0.95
CSDC2-201ENST00000306149 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
CSDC2-201ENST00000306149 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
CSDC2-201ENST00000306149 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
CSDC2-201ENST00000306149 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
CSDC2-201ENST00000306149 TROQ12816 1431 aaPredicted RBP20.94■□□□□ 0.94
CSDC2-201ENST00000306149 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
CSDC2-201ENST00000306149 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
CSDC2-201ENST00000306149 TEX14Q8IWB6 1497 aa20.93■□□□□ 0.94
CSDC2-201ENST00000306149 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
CSDC2-201ENST00000306149 CAMSAP2Q08AD1 1489 aa20.93■□□□□ 0.94
CSDC2-201ENST00000306149 PRKRIP1Q9H875 184 aaPredicted RBP20.92■□□□□ 0.94
CSDC2-201ENST00000306149 JPH4Q96JJ6 628 aa20.92■□□□□ 0.94
CSDC2-201ENST00000306149 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
CSDC2-201ENST00000306149 GPATCH8Q9UKJ3 1502 aaKnown RBP20.9■□□□□ 0.94
CSDC2-201ENST00000306149 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
CSDC2-201ENST00000306149 KIF14Q15058 1648 aa20.9■□□□□ 0.94
CSDC2-201ENST00000306149 PZPP20742 1482 aa20.89■□□□□ 0.93
CSDC2-201ENST00000306149 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.93
CSDC2-201ENST00000306149 ANP32EQ9BTT0 268 aa20.89■□□□□ 0.93
CSDC2-201ENST00000306149 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
CSDC2-201ENST00000306149 PKD2Q13563 968 aa20.88■□□□□ 0.93
CSDC2-201ENST00000306149 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
CSDC2-201ENST00000306149 SPATA31E1Q6ZUB1 1445 aa20.85■□□□□ 0.93
CSDC2-201ENST00000306149 MAGI1Q96QZ7 1491 aaPredicted RBP20.85■□□□□ 0.93
CSDC2-201ENST00000306149 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.92
CSDC2-201ENST00000306149 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.92
CSDC2-201ENST00000306149 ADGBQ8N7X0 1667 aa20.82■□□□□ 0.92
CSDC2-201ENST00000306149 CARMIL2Q6F5E8 1435 aa20.82■□□□□ 0.92
CSDC2-201ENST00000306149 ANKRD30AQ9BXX3 1397 aa20.8■□□□□ 0.92
CSDC2-201ENST00000306149 ITSN2Q9NZM3 1697 aa20.8■□□□□ 0.92
CSDC2-201ENST00000306149 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
CSDC2-201ENST00000306149 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
CSDC2-201ENST00000306149 CROCC2H7BZ55 1655 aa20.77■□□□□ 0.92
CSDC2-201ENST00000306149 NUP155O75694 1391 aa20.76■□□□□ 0.91
CSDC2-201ENST00000306149 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
CSDC2-201ENST00000306149 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
CSDC2-201ENST00000306149 USP47Q96K76 1375 aa20.75■□□□□ 0.91
CSDC2-201ENST00000306149 ADCY10Q96PN6 1610 aa20.75■□□□□ 0.91
CSDC2-201ENST00000306149 KDM2AQ9Y2K7 1162 aa20.75■□□□□ 0.91
CSDC2-201ENST00000306149 NUP160Q12769 1436 aa20.75■□□□□ 0.91
CSDC2-201ENST00000306149 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
CSDC2-201ENST00000306149 ATP10BO94823 1461 aa20.74■□□□□ 0.91
CSDC2-201ENST00000306149 TSPY4P0CV99 314 aa20.72■□□□□ 0.91
CSDC2-201ENST00000306149 TSPY10P0CW01 314 aa20.72■□□□□ 0.91
CSDC2-201ENST00000306149 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
CSDC2-201ENST00000306149 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
CSDC2-201ENST00000306149 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
CSDC2-201ENST00000306149 BCORL1Q5H9F3 1711 aa20.7■□□□□ 0.9
CSDC2-201ENST00000306149 CDC42BPAQ5VT25 1732 aa20.7■□□□□ 0.9
CSDC2-201ENST00000306149 ZBED9Q6R2W3 1325 aa20.69■□□□□ 0.9
CSDC2-201ENST00000306149 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
CSDC2-201ENST00000306149 ABCC10Q5T3U5 1492 aa20.68■□□□□ 0.9
CSDC2-201ENST00000306149 CARD11Q9BXL7 1154 aa20.67■□□□□ 0.9
CSDC2-201ENST00000306149 ABCA8O94911 1581 aa20.67■□□□□ 0.9
CSDC2-201ENST00000306149 DCAF11Q8TEB1 546 aa20.65■□□□□ 0.9
CSDC2-201ENST00000306149 KIF15Q9NS87 1388 aa20.64■□□□□ 0.89
CSDC2-201ENST00000306149 B4GALNT3Q6L9W6 998 aa20.63■□□□□ 0.89
CSDC2-201ENST00000306149 ST20-MTHFSA0A0A6YYL1 179 aa20.62■□□□□ 0.89
CSDC2-201ENST00000306149 PPP4R2Q9NY27 417 aa20.62■□□□□ 0.89
CSDC2-201ENST00000306149 KDM5CP41229 1560 aa20.61■□□□□ 0.89
CSDC2-201ENST00000306149 PTPRGP23470 1445 aa20.6■□□□□ 0.89
CSDC2-201ENST00000306149 SHANK2Q9UPX8 1470 aa20.58■□□□□ 0.88
CSDC2-201ENST00000306149 RGL3Q3MIN7 710 aa20.57■□□□□ 0.88
CSDC2-201ENST00000306149 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
CSDC2-201ENST00000306149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.88
CSDC2-201ENST00000306149 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
CSDC2-201ENST00000306149 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
CSDC2-201ENST00000306149 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
CSDC2-201ENST00000306149 MSH5O43196 834 aa20.54■□□□□ 0.88
CSDC2-201ENST00000306149 BCL11AQ9H165 835 aa20.52■□□□□ 0.88
CSDC2-201ENST00000306149 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
CSDC2-201ENST00000306149 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.88
CSDC2-201ENST00000306149 KDM5DQ9BY66 1539 aa20.51■□□□□ 0.87
CSDC2-201ENST00000306149 ARHGEF12Q9NZN5 1544 aa20.51■□□□□ 0.87
CSDC2-201ENST00000306149 ROCK2O75116 1388 aaKnown RBP20.51■□□□□ 0.87
CSDC2-201ENST00000306149 SAMD9LQ8IVG5 1584 aa20.5■□□□□ 0.87
CSDC2-201ENST00000306149 CCDC141Q6ZP82 1450 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms