RNA–Protein interactions for RNA: ENST00000305031.4

CHSY3-201, Transcript of chondroitin sulfate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY3, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY3-201ENST00000305031 NEFMP07197 916 aa21.53■■□□□ 1.04
CHSY3-201ENST00000305031 NUP155O75694 1391 aa21.53■■□□□ 1.04
CHSY3-201ENST00000305031 PCF11O94913 1555 aaKnown RBP21.52■■□□□ 1.04
CHSY3-201ENST00000305031 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
CHSY3-201ENST00000305031 FYCO1Q9BQS8 1478 aa21.51■■□□□ 1.03
CHSY3-201ENST00000305031 CC2D1BQ5T0F9 858 aaKnown RBP21.49■■□□□ 1.03
CHSY3-201ENST00000305031 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
CHSY3-201ENST00000305031 RGS3P49796 1198 aa21.48■■□□□ 1.03
CHSY3-201ENST00000305031 MSH5O43196 834 aa21.47■■□□□ 1.03
CHSY3-201ENST00000305031 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
CHSY3-201ENST00000305031 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
CHSY3-201ENST00000305031 NPM1P06748 294 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHSY3-201ENST00000305031 CDK13Q14004 1512 aaKnown RBP21.41■■□□□ 1.02
CHSY3-201ENST00000305031 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
CHSY3-201ENST00000305031 SLC4A3P48751 1232 aa21.39■■□□□ 1.02
CHSY3-201ENST00000305031 NEUROD2Q15784 382 aa21.38■■□□□ 1.01
CHSY3-201ENST00000305031 ANKRD30AQ9BXX3 1397 aa21.38■■□□□ 1.01
CHSY3-201ENST00000305031 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
CHSY3-201ENST00000305031 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
CHSY3-201ENST00000305031 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
CHSY3-201ENST00000305031 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
CHSY3-201ENST00000305031 PLIN1O60240 522 aa21.36■■□□□ 1.01
CHSY3-201ENST00000305031 WASHC2AQ641Q2 1341 aa21.36■■□□□ 1.01
CHSY3-201ENST00000305031 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
CHSY3-201ENST00000305031 NAIPQ13075 1403 aa21.35■■□□□ 1.01
CHSY3-201ENST00000305031 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
CHSY3-201ENST00000305031 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
CHSY3-201ENST00000305031 PRKRIP1Q9H875 184 aaPredicted RBP21.34■■□□□ 1.01
CHSY3-201ENST00000305031 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1
CHSY3-201ENST00000305031 HFM1A2PYH4 1435 aa21.33■■□□□ 1
CHSY3-201ENST00000305031 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
CHSY3-201ENST00000305031 PTPRGP23470 1445 aa21.31■■□□□ 1
CHSY3-201ENST00000305031 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
CHSY3-201ENST00000305031 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
CHSY3-201ENST00000305031 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
CHSY3-201ENST00000305031 WDR43Q15061 677 aaKnown RBP eCLIP21.29■■□□□ 1
CHSY3-201ENST00000305031 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
CHSY3-201ENST00000305031 EPRSP07814 1512 aaKnown RBP21.26■□□□□ 0.99
CHSY3-201ENST00000305031 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
CHSY3-201ENST00000305031 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
CHSY3-201ENST00000305031 SPRYD3Q8NCJ5 442 aa21.25■□□□□ 0.99
CHSY3-201ENST00000305031 EXOC6Q8TAG9 804 aa21.25■□□□□ 0.99
CHSY3-201ENST00000305031 C11orf95C9JLR9 678 aaPredicted RBP21.24■□□□□ 0.99
CHSY3-201ENST00000305031 IPO9Q96P70 1041 aaKnown RBP21.22■□□□□ 0.99
CHSY3-201ENST00000305031 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
CHSY3-201ENST00000305031 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
CHSY3-201ENST00000305031 PLB1Q6P1J6 1458 aa21.21■□□□□ 0.99
CHSY3-201ENST00000305031 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
CHSY3-201ENST00000305031 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.98
CHSY3-201ENST00000305031 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
CHSY3-201ENST00000305031 GGT6Q6P531 493 aa21.19■□□□□ 0.98
CHSY3-201ENST00000305031 FRAT1Q92837 279 aaPredicted RBP21.18■□□□□ 0.98
CHSY3-201ENST00000305031 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
CHSY3-201ENST00000305031 USP47Q96K76 1375 aa21.18■□□□□ 0.98
CHSY3-201ENST00000305031 KNSTRNQ9Y448 316 aa21.18■□□□□ 0.98
CHSY3-201ENST00000305031 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
CHSY3-201ENST00000305031 EHBP1L1Q8N3D4 1523 aa21.17■□□□□ 0.98
CHSY3-201ENST00000305031 CUL7Q14999 1698 aa21.17■□□□□ 0.98
CHSY3-201ENST00000305031 STAG3Q9UJ98 1225 aa21.17■□□□□ 0.98
CHSY3-201ENST00000305031 RCAN3Q9UKA8 241 aa21.17■□□□□ 0.98
CHSY3-201ENST00000305031 KIF3BO15066 747 aa21.17■□□□□ 0.98
CHSY3-201ENST00000305031 ANKRD50Q9ULJ7 1429 aa21.16■□□□□ 0.98
CHSY3-201ENST00000305031 IQGAP2Q13576 1575 aa21.16■□□□□ 0.98
CHSY3-201ENST00000305031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHSY3-201ENST00000305031 CCDC7Q96M83 1385 aa21.14■□□□□ 0.98
CHSY3-201ENST00000305031 AKNAQ7Z591 1439 aa21.14■□□□□ 0.97
CHSY3-201ENST00000305031 KIF15Q9NS87 1388 aa21.14■□□□□ 0.97
CHSY3-201ENST00000305031 ANO8Q9HCE9 1232 aaPredicted RBP21.14■□□□□ 0.97
CHSY3-201ENST00000305031 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
CHSY3-201ENST00000305031 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
CHSY3-201ENST00000305031 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.97
CHSY3-201ENST00000305031 SUPT6HQ7KZ85 1726 aaKnown RBP21.11■□□□□ 0.97
CHSY3-201ENST00000305031 DAPK1P53355 1430 aa21.11■□□□□ 0.97
CHSY3-201ENST00000305031 NUTM2DQ5VT03 806 aaPredicted RBP21.11■□□□□ 0.97
CHSY3-201ENST00000305031 AFAP1Q8N556 730 aa21.11■□□□□ 0.97
CHSY3-201ENST00000305031 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
CHSY3-201ENST00000305031 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
CHSY3-201ENST00000305031 TMF1P82094 1093 aa21.1■□□□□ 0.97
CHSY3-201ENST00000305031 MIA2Q96PC5 1412 aa21.09■□□□□ 0.97
CHSY3-201ENST00000305031 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
CHSY3-201ENST00000305031 NBPF1Q3BBV0 1214 aa21.09■□□□□ 0.97
CHSY3-201ENST00000305031 SPAG9O60271 1321 aaKnown RBP21.09■□□□□ 0.97
CHSY3-201ENST00000305031 PTPN23Q9H3S7 1636 aa21.08■□□□□ 0.96
CHSY3-201ENST00000305031 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.96
CHSY3-201ENST00000305031 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.96
CHSY3-201ENST00000305031 HSP90AA1P07900 732 aaKnown RBP21.07■□□□□ 0.96
CHSY3-201ENST00000305031 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
CHSY3-201ENST00000305031 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
CHSY3-201ENST00000305031 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
CHSY3-201ENST00000305031 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
CHSY3-201ENST00000305031 ABCC5O15440 1437 aa21.07■□□□□ 0.96
CHSY3-201ENST00000305031 ZBED9Q6R2W3 1325 aa21.06■□□□□ 0.96
CHSY3-201ENST00000305031 HECW1Q76N89 1606 aa21.06■□□□□ 0.96
CHSY3-201ENST00000305031 PDE4AP27815 886 aa21.05■□□□□ 0.96
CHSY3-201ENST00000305031 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
CHSY3-201ENST00000305031 UPF2Q9HAU5 1272 aaKnown RBP21.04■□□□□ 0.96
CHSY3-201ENST00000305031 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
CHSY3-201ENST00000305031 RSPH4AQ5TD94 716 aa21.02■□□□□ 0.96
CHSY3-201ENST00000305031 GZF1Q9H116 711 aaPredicted RBP21.02■□□□□ 0.96
CHSY3-201ENST00000305031 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms