RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
COL4A3-201ENST00000304990 TTC37Q6PGP7 1564 aa17.07■□□□□ 0.32
COL4A3-201ENST00000304990 YEATS2Q9ULM3 1422 aa17.07■□□□□ 0.32
COL4A3-201ENST00000304990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL4A3-201ENST00000304990 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
COL4A3-201ENST00000304990 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
COL4A3-201ENST00000304990 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
COL4A3-201ENST00000304990 SOCS7O14512 581 aa17.02■□□□□ 0.32
COL4A3-201ENST00000304990 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
COL4A3-201ENST00000304990 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
COL4A3-201ENST00000304990 SCAPERQ9BY12 1400 aa17■□□□□ 0.31
COL4A3-201ENST00000304990 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
COL4A3-201ENST00000304990 C9orf84Q5VXU9 1444 aa16.98■□□□□ 0.31
COL4A3-201ENST00000304990 ATP10AO60312 1499 aa16.98■□□□□ 0.31
COL4A3-201ENST00000304990 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
COL4A3-201ENST00000304990 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
COL4A3-201ENST00000304990 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
COL4A3-201ENST00000304990 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
COL4A3-201ENST00000304990 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
COL4A3-201ENST00000304990 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
COL4A3-201ENST00000304990 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
COL4A3-201ENST00000304990 CDK13Q14004 1512 aaKnown RBP16.95■□□□□ 0.3
COL4A3-201ENST00000304990 PLCH2O75038 1416 aa16.94■□□□□ 0.3
COL4A3-201ENST00000304990 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
COL4A3-201ENST00000304990 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
COL4A3-201ENST00000304990 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
COL4A3-201ENST00000304990 C3P01024 1663 aa16.88■□□□□ 0.29
COL4A3-201ENST00000304990 EEA1Q15075 1411 aa16.87■□□□□ 0.29
COL4A3-201ENST00000304990 ZNF518AQ6AHZ1 1483 aa16.87■□□□□ 0.29
COL4A3-201ENST00000304990 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
COL4A3-201ENST00000304990 KIF14Q15058 1648 aa16.86■□□□□ 0.29
COL4A3-201ENST00000304990 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
COL4A3-201ENST00000304990 PTPRTO14522 1441 aa16.86■□□□□ 0.29
COL4A3-201ENST00000304990 AFAP1Q8N556 730 aa16.83■□□□□ 0.28
COL4A3-201ENST00000304990 DIP2CQ9Y2E4 1556 aa16.82■□□□□ 0.28
COL4A3-201ENST00000304990 KDM5CP41229 1560 aa16.81■□□□□ 0.28
COL4A3-201ENST00000304990 CLIP1P30622 1438 aa16.8■□□□□ 0.28
COL4A3-201ENST00000304990 ABCA6Q8N139 1617 aa16.8■□□□□ 0.28
COL4A3-201ENST00000304990 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
COL4A3-201ENST00000304990 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
COL4A3-201ENST00000304990 REREQ9P2R6 1566 aa16.79■□□□□ 0.28
COL4A3-201ENST00000304990 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
COL4A3-201ENST00000304990 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
COL4A3-201ENST00000304990 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
COL4A3-201ENST00000304990 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
COL4A3-201ENST00000304990 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
COL4A3-201ENST00000304990 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
COL4A3-201ENST00000304990 NCOA1Q15788 1441 aa16.75■□□□□ 0.27
COL4A3-201ENST00000304990 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
COL4A3-201ENST00000304990 MLH3Q9UHC1 1453 aa16.74■□□□□ 0.27
COL4A3-201ENST00000304990 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
COL4A3-201ENST00000304990 AGLP35573 1532 aa16.74■□□□□ 0.27
COL4A3-201ENST00000304990 CNTLNQ9NXG0 1405 aa16.73■□□□□ 0.27
COL4A3-201ENST00000304990 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
COL4A3-201ENST00000304990 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
COL4A3-201ENST00000304990 PREX2Q70Z35 1606 aa16.72■□□□□ 0.27
COL4A3-201ENST00000304990 ABCC1P33527 1531 aa16.7■□□□□ 0.26
COL4A3-201ENST00000304990 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
COL4A3-201ENST00000304990 MROH2AA6NES4 1674 aa16.7■□□□□ 0.26
COL4A3-201ENST00000304990 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
COL4A3-201ENST00000304990 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
COL4A3-201ENST00000304990 NCKAP5LQ9HCH0 1330 aa16.69■□□□□ 0.26
COL4A3-201ENST00000304990 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
COL4A3-201ENST00000304990 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
COL4A3-201ENST00000304990 NPATQ14207 1427 aa16.67■□□□□ 0.26
COL4A3-201ENST00000304990 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
COL4A3-201ENST00000304990 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
COL4A3-201ENST00000304990 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
COL4A3-201ENST00000304990 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
COL4A3-201ENST00000304990 CDC42BPAQ5VT25 1732 aa16.64■□□□□ 0.25
COL4A3-201ENST00000304990 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
COL4A3-201ENST00000304990 ZNF142P52746 1687 aaPredicted RBP16.62■□□□□ 0.25
COL4A3-201ENST00000304990 PKD2Q13563 968 aa16.62■□□□□ 0.25
COL4A3-201ENST00000304990 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
COL4A3-201ENST00000304990 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
COL4A3-201ENST00000304990 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
COL4A3-201ENST00000304990 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
COL4A3-201ENST00000304990 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
COL4A3-201ENST00000304990 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
COL4A3-201ENST00000304990 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
COL4A3-201ENST00000304990 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
COL4A3-201ENST00000304990 MED1Q15648 1581 aaPredicted RBP16.56■□□□□ 0.24
COL4A3-201ENST00000304990 GGT6Q6P531 493 aa16.56■□□□□ 0.24
COL4A3-201ENST00000304990 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
COL4A3-201ENST00000304990 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL4A3-201ENST00000304990 HSPA1LP34931 641 aa16.54■□□□□ 0.24
COL4A3-201ENST00000304990 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
COL4A3-201ENST00000304990 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
COL4A3-201ENST00000304990 TOM1O60784 492 aa16.53■□□□□ 0.24
COL4A3-201ENST00000304990 A2MP01023 1474 aa16.53■□□□□ 0.24
COL4A3-201ENST00000304990 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
COL4A3-201ENST00000304990 PTPRKQ15262 1439 aa16.53■□□□□ 0.24
COL4A3-201ENST00000304990 ADGBQ8N7X0 1667 aa16.51■□□□□ 0.23
COL4A3-201ENST00000304990 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
COL4A3-201ENST00000304990 PLXNC1O60486 1568 aa16.5■□□□□ 0.23
COL4A3-201ENST00000304990 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
COL4A3-201ENST00000304990 CPS1P31327 1500 aa16.49■□□□□ 0.23
COL4A3-201ENST00000304990 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
COL4A3-201ENST00000304990 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
COL4A3-201ENST00000304990 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms