RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 PLB1Q6P1J6 1458 aa10.41□□□□□ -0.74
RGPD3-201ENST00000304514 CDC42BPBQ9Y5S2 1711 aa10.41□□□□□ -0.74
RGPD3-201ENST00000304514 ABCC10Q5T3U5 1492 aa10.41□□□□□ -0.74
RGPD3-201ENST00000304514 PREX2Q70Z35 1606 aa10.4□□□□□ -0.74
RGPD3-201ENST00000304514 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.74
RGPD3-201ENST00000304514 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.74
RGPD3-201ENST00000304514 GPATCH8Q9UKJ3 1502 aaKnown RBP10.39□□□□□ -0.75
RGPD3-201ENST00000304514 KDM5DQ9BY66 1539 aa10.39□□□□□ -0.75
RGPD3-201ENST00000304514 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
RGPD3-201ENST00000304514 PZPP20742 1482 aa10.38□□□□□ -0.75
RGPD3-201ENST00000304514 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
RGPD3-201ENST00000304514 PRG4Q92954 1404 aaPredicted RBP10.38□□□□□ -0.75
RGPD3-201ENST00000304514 ARHGEF5Q12774 1597 aa10.38□□□□□ -0.75
RGPD3-201ENST00000304514 SHANK2Q9UPX8 1470 aa10.38□□□□□ -0.75
RGPD3-201ENST00000304514 RPRD2Q5VT52 1461 aaKnown RBP10.36□□□□□ -0.75
RGPD3-201ENST00000304514 TONSLQ96HA7 1378 aa10.36□□□□□ -0.75
RGPD3-201ENST00000304514 SAMD9LQ8IVG5 1584 aa10.36□□□□□ -0.75
RGPD3-201ENST00000304514 ANKRD30BQ9BXX2 1392 aa10.34□□□□□ -0.75
RGPD3-201ENST00000304514 MAST1Q9Y2H9 1570 aa10.33□□□□□ -0.76
RGPD3-201ENST00000304514 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
RGPD3-201ENST00000304514 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
RGPD3-201ENST00000304514 ATP10BO94823 1461 aa10.33□□□□□ -0.76
RGPD3-201ENST00000304514 CARMIL2Q6F5E8 1435 aa10.32□□□□□ -0.76
RGPD3-201ENST00000304514 TTC37Q6PGP7 1564 aa10.32□□□□□ -0.76
RGPD3-201ENST00000304514 KDM5CP41229 1560 aa10.32□□□□□ -0.76
RGPD3-201ENST00000304514 MYO5CQ9NQX4 1742 aa10.31□□□□□ -0.76
RGPD3-201ENST00000304514 UNC13BO14795 1591 aa10.31□□□□□ -0.76
RGPD3-201ENST00000304514 NCOA1Q15788 1441 aa10.31□□□□□ -0.76
RGPD3-201ENST00000304514 ZNF644Q9H582 1327 aaPredicted RBP10.31□□□□□ -0.76
RGPD3-201ENST00000304514 BCORL1Q5H9F3 1711 aa10.3□□□□□ -0.76
RGPD3-201ENST00000304514 MPHOSPH9Q99550 1183 aa10.3□□□□□ -0.76
RGPD3-201ENST00000304514 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
RGPD3-201ENST00000304514 E9PCH4 1651 aa10.29□□□□□ -0.76
RGPD3-201ENST00000304514 PLXNC1O60486 1568 aa10.29□□□□□ -0.76
RGPD3-201ENST00000304514 CLASP1Q7Z460 1538 aa10.29□□□□□ -0.76
RGPD3-201ENST00000304514 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
RGPD3-201ENST00000304514 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
RGPD3-201ENST00000304514 SPATA31E1Q6ZUB1 1445 aa10.28□□□□□ -0.76
RGPD3-201ENST00000304514 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
RGPD3-201ENST00000304514 ZCCHC11Q5TAX3 1644 aaKnown RBP10.28□□□□□ -0.76
RGPD3-201ENST00000304514 CHMP7Q8WUX9 453 aaPredicted RBP10.27□□□□□ -0.77
RGPD3-201ENST00000304514 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.77
RGPD3-201ENST00000304514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.26□□□□□ -0.77
RGPD3-201ENST00000304514 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
RGPD3-201ENST00000304514 SUPT16HQ9Y5B9 1047 aaKnown RBP10.26□□□□□ -0.77
RGPD3-201ENST00000304514 PTPRGP23470 1445 aa10.26□□□□□ -0.77
RGPD3-201ENST00000304514 IQGAP3Q86VI3 1631 aa10.26□□□□□ -0.77
RGPD3-201ENST00000304514 CNTLNQ9NXG0 1405 aa10.25□□□□□ -0.77
RGPD3-201ENST00000304514 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
RGPD3-201ENST00000304514 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
RGPD3-201ENST00000304514 ABCC2Q92887 1545 aa10.24□□□□□ -0.77
RGPD3-201ENST00000304514 TRPM1Q7Z4N2 1603 aa10.24□□□□□ -0.77
RGPD3-201ENST00000304514 JPH4Q96JJ6 628 aa10.24□□□□□ -0.77
RGPD3-201ENST00000304514 WASHC2AQ641Q2 1341 aa10.24□□□□□ -0.77
RGPD3-201ENST00000304514 C9orf84Q5VXU9 1444 aa10.24□□□□□ -0.77
RGPD3-201ENST00000304514 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
RGPD3-201ENST00000304514 UHRF1BP1Q6BDS2 1440 aa10.23□□□□□ -0.77
RGPD3-201ENST00000304514 LAMC1P11047 1609 aa10.23□□□□□ -0.77
RGPD3-201ENST00000304514 HSPA5P11021 654 aaKnown RBP10.23□□□□□ -0.77
RGPD3-201ENST00000304514 FOXD1Q16676 465 aa10.22□□□□□ -0.77
RGPD3-201ENST00000304514 SYCP2Q9BX26 1530 aa10.22□□□□□ -0.77
RGPD3-201ENST00000304514 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
RGPD3-201ENST00000304514 MAGI2Q86UL8 1455 aa10.21□□□□□ -0.77
RGPD3-201ENST00000304514 FAM135AQ9P2D6 1515 aa10.21□□□□□ -0.77
RGPD3-201ENST00000304514 ANKRD30AQ9BXX3 1397 aa10.21□□□□□ -0.78
RGPD3-201ENST00000304514 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.78
RGPD3-201ENST00000304514 RALGAPBQ86X10 1494 aa10.21□□□□□ -0.78
RGPD3-201ENST00000304514 CCDC141Q6ZP82 1450 aa10.2□□□□□ -0.78
RGPD3-201ENST00000304514 ANKRD50Q9ULJ7 1429 aa10.2□□□□□ -0.78
RGPD3-201ENST00000304514 NBPF8Q3BBV2 869 aa10.2□□□□□ -0.78
RGPD3-201ENST00000304514 CFDP1Q9UEE9 299 aaPredicted RBP10.19□□□□□ -0.78
RGPD3-201ENST00000304514 CCDC7Q96M83 1385 aa10.19□□□□□ -0.78
RGPD3-201ENST00000304514 RNF17Q9BXT8 1623 aaKnown RBP10.19□□□□□ -0.78
RGPD3-201ENST00000304514 UHRF1BP1LA0JNW5 1464 aa10.19□□□□□ -0.78
RGPD3-201ENST00000304514 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
RGPD3-201ENST00000304514 ANP32CO43423 234 aa10.18□□□□□ -0.78
RGPD3-201ENST00000304514 ABCC1P33527 1531 aa10.17□□□□□ -0.78
RGPD3-201ENST00000304514 CEP152O94986 1710 aa10.17□□□□□ -0.78
RGPD3-201ENST00000304514 C11orf95C9JLR9 678 aaPredicted RBP10.17□□□□□ -0.78
RGPD3-201ENST00000304514 ABCA9Q8IUA7 1624 aa10.16□□□□□ -0.78
RGPD3-201ENST00000304514 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
RGPD3-201ENST00000304514 FBLN2P98095 1184 aa10.15□□□□□ -0.78
RGPD3-201ENST00000304514 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
RGPD3-201ENST00000304514 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
RGPD3-201ENST00000304514 ARAP3Q8WWN8 1544 aa10.14□□□□□ -0.79
RGPD3-201ENST00000304514 DUOX2Q9NRD8 1548 aa10.14□□□□□ -0.79
RGPD3-201ENST00000304514 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
RGPD3-201ENST00000304514 DHX29Q7Z478 1369 aaKnown RBP10.13□□□□□ -0.79
RGPD3-201ENST00000304514 EIF2AK4Q9P2K8 1649 aaKnown RBP10.13□□□□□ -0.79
RGPD3-201ENST00000304514 SPHKAPQ2M3C7 1700 aa10.13□□□□□ -0.79
RGPD3-201ENST00000304514 KIF15Q9NS87 1388 aa10.12□□□□□ -0.79
RGPD3-201ENST00000304514 INO80Q9ULG1 1556 aaPredicted RBP10.12□□□□□ -0.79
RGPD3-201ENST00000304514 PLEKHD1A6NEE1 506 aa10.12□□□□□ -0.79
RGPD3-201ENST00000304514 KIF7Q2M1P5 1343 aa10.12□□□□□ -0.79
RGPD3-201ENST00000304514 ZFYVE16Q7Z3T8 1539 aa10.11□□□□□ -0.79
RGPD3-201ENST00000304514 PLEKHH2Q8IVE3 1493 aa10.11□□□□□ -0.79
RGPD3-201ENST00000304514 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
RGPD3-201ENST00000304514 IQGAP1P46940 1657 aa10.11□□□□□ -0.79
RGPD3-201ENST00000304514 ATP10AO60312 1499 aa10.1□□□□□ -0.79
RGPD3-201ENST00000304514 PLA2R1Q13018 1463 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms