RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 IFT140Q96RY7 1462 aa11.21□□□□□ -0.61
SCN11A-201ENST00000302328 NUP155O75694 1391 aa11.21□□□□□ -0.62
SCN11A-201ENST00000302328 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
SCN11A-201ENST00000302328 NGDNQ8NEJ9 315 aaKnown RBP11.2□□□□□ -0.62
SCN11A-201ENST00000302328 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
SCN11A-201ENST00000302328 NESP48681 1621 aa11.2□□□□□ -0.62
SCN11A-201ENST00000302328 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
SCN11A-201ENST00000302328 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
SCN11A-201ENST00000302328 EVA1CP58658 441 aa11.18□□□□□ -0.62
SCN11A-201ENST00000302328 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
SCN11A-201ENST00000302328 EIF3AQ14152 1382 aaKnown RBP11.17□□□□□ -0.62
SCN11A-201ENST00000302328 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
SCN11A-201ENST00000302328 VPS8Q8N3P4 1428 aa11.14□□□□□ -0.63
SCN11A-201ENST00000302328 ROCK2O75116 1388 aaKnown RBP11.14□□□□□ -0.63
SCN11A-201ENST00000302328 PRG4Q92954 1404 aaPredicted RBP11.13□□□□□ -0.63
SCN11A-201ENST00000302328 SETD5Q9C0A6 1442 aa11.13□□□□□ -0.63
SCN11A-201ENST00000302328 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
SCN11A-201ENST00000302328 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
SCN11A-201ENST00000302328 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
SCN11A-201ENST00000302328 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
SCN11A-201ENST00000302328 FOXD1Q16676 465 aa11.13□□□□□ -0.63
SCN11A-201ENST00000302328 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
SCN11A-201ENST00000302328 ATF3P18847 181 aa11.11□□□□□ -0.63
SCN11A-201ENST00000302328 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
SCN11A-201ENST00000302328 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
SCN11A-201ENST00000302328 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
SCN11A-201ENST00000302328 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCN11A-201ENST00000302328 UACAQ9BZF9 1416 aa11.1□□□□□ -0.63
SCN11A-201ENST00000302328 DCAF8L1A6NGE4 600 aa11.1□□□□□ -0.63
SCN11A-201ENST00000302328 ARHGAP5Q13017 1502 aa11.1□□□□□ -0.63
SCN11A-201ENST00000302328 KANK4Q5T7N3 995 aaPredicted RBP11.09□□□□□ -0.63
SCN11A-201ENST00000302328 MPHOSPH9Q99550 1183 aa11.09□□□□□ -0.63
SCN11A-201ENST00000302328 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
SCN11A-201ENST00000302328 MSH5O43196 834 aa11.09□□□□□ -0.63
SCN11A-201ENST00000302328 TERF2IPQ9NYB0 399 aa11.09□□□□□ -0.63
SCN11A-201ENST00000302328 CASC1Q6TDU7 716 aa11.08□□□□□ -0.64
SCN11A-201ENST00000302328 G3V3G9 751 aa11.08□□□□□ -0.64
SCN11A-201ENST00000302328 AMPHP49418 695 aa11.08□□□□□ -0.64
SCN11A-201ENST00000302328 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
SCN11A-201ENST00000302328 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
SCN11A-201ENST00000302328 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
SCN11A-201ENST00000302328 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
SCN11A-201ENST00000302328 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
SCN11A-201ENST00000302328 LTV1Q96GA3 475 aaPredicted RBP11.05□□□□□ -0.64
SCN11A-201ENST00000302328 PSME1Q06323 249 aa11.05□□□□□ -0.64
SCN11A-201ENST00000302328 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
SCN11A-201ENST00000302328 FKBP8Q14318 412 aa11.04□□□□□ -0.64
SCN11A-201ENST00000302328 CHMP4BQ9H444 224 aaKnown RBP11.04□□□□□ -0.64
SCN11A-201ENST00000302328 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
SCN11A-201ENST00000302328 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
SCN11A-201ENST00000302328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCN11A-201ENST00000302328 CFTRP13569 1480 aa11.04□□□□□ -0.64
SCN11A-201ENST00000302328 TOPBP1Q92547 1522 aa11.03□□□□□ -0.64
SCN11A-201ENST00000302328 TRAK1Q9UPV9 953 aa11.03□□□□□ -0.64
SCN11A-201ENST00000302328 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.64
SCN11A-201ENST00000302328 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.65
SCN11A-201ENST00000302328 IGF1RP08069 1367 aa11.02□□□□□ -0.65
SCN11A-201ENST00000302328 CCDC144AA2RUR9 1427 aa11.01□□□□□ -0.65
SCN11A-201ENST00000302328 GTF3C3Q9Y5Q9 886 aa11.01□□□□□ -0.65
SCN11A-201ENST00000302328 ISY1Q9ULR0 285 aaKnown RBP11□□□□□ -0.65
SCN11A-201ENST00000302328 CALD1Q05682 793 aaKnown RBP11□□□□□ -0.65
SCN11A-201ENST00000302328 MS4A1P11836 297 aa11□□□□□ -0.65
SCN11A-201ENST00000302328 FRAT1Q92837 279 aaPredicted RBP11□□□□□ -0.65
SCN11A-201ENST00000302328 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
SCN11A-201ENST00000302328 ANP32BQ92688 251 aaKnown RBP10.99□□□□□ -0.65
SCN11A-201ENST00000302328 PIP4K2BP78356 416 aa10.99□□□□□ -0.65
SCN11A-201ENST00000302328 SF3B2Q13435 895 aaKnown RBP10.99□□□□□ -0.65
SCN11A-201ENST00000302328 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
SCN11A-201ENST00000302328 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
SCN11A-201ENST00000302328 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
SCN11A-201ENST00000302328 CUX1P39880 1505 aa10.98□□□□□ -0.65
SCN11A-201ENST00000302328 EIF5BO60841 1220 aaKnown RBP10.97□□□□□ -0.65
SCN11A-201ENST00000302328 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
SCN11A-201ENST00000302328 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
SCN11A-201ENST00000302328 SYNJ1O43426 1573 aa10.97□□□□□ -0.65
SCN11A-201ENST00000302328 TAF7LQ5H9L4 462 aa10.97□□□□□ -0.65
SCN11A-201ENST00000302328 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
SCN11A-201ENST00000302328 U2AF1L5P0DN76 240 aaPredicted RBP10.96□□□□□ -0.65
SCN11A-201ENST00000302328 U2AF1Q01081 240 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCN11A-201ENST00000302328 COG3Q96JB2 828 aa10.96□□□□□ -0.65
SCN11A-201ENST00000302328 PROSER2Q86WR7 435 aaPredicted RBP10.96□□□□□ -0.65
SCN11A-201ENST00000302328 EVC2Q86UK5 1308 aa10.96□□□□□ -0.66
SCN11A-201ENST00000302328 SYTL4Q96C24 671 aaPredicted RBP10.95□□□□□ -0.66
SCN11A-201ENST00000302328 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
SCN11A-201ENST00000302328 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
SCN11A-201ENST00000302328 HSPA5P11021 654 aaKnown RBP10.95□□□□□ -0.66
SCN11A-201ENST00000302328 RAB3GAP2Q9H2M9 1393 aa10.95□□□□□ -0.66
SCN11A-201ENST00000302328 UNC13AQ9UPW8 1703 aa10.94□□□□□ -0.66
SCN11A-201ENST00000302328 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
SCN11A-201ENST00000302328 TXNDC2Q86VQ3 553 aa10.94□□□□□ -0.66
SCN11A-201ENST00000302328 POLA1P09884 1462 aaPredicted RBP10.94□□□□□ -0.66
SCN11A-201ENST00000302328 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
SCN11A-201ENST00000302328 NUTM2BA6NNL0 878 aaPredicted RBP10.93□□□□□ -0.66
SCN11A-201ENST00000302328 NUTM2EB1AL46 878 aaPredicted RBP10.93□□□□□ -0.66
SCN11A-201ENST00000302328 KCNJ4P48050 445 aa10.93□□□□□ -0.66
SCN11A-201ENST00000302328 NUTM2AQ8IVF1 878 aaPredicted RBP10.93□□□□□ -0.66
SCN11A-201ENST00000302328 MYOM3Q5VTT5 1437 aa10.93□□□□□ -0.66
SCN11A-201ENST00000302328 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
SCN11A-201ENST00000302328 FGD1P98174 961 aa10.93□□□□□ -0.66
SCN11A-201ENST00000302328 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms