RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
PDGFD-201ENST00000302251 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
PDGFD-201ENST00000302251 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
PDGFD-201ENST00000302251 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
PDGFD-201ENST00000302251 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
PDGFD-201ENST00000302251 HSP90AA1P07900 732 aaKnown RBP15.97■□□□□ 0.15
PDGFD-201ENST00000302251 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
PDGFD-201ENST00000302251 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.96■□□□□ 0.15
PDGFD-201ENST00000302251 KDM5BQ9UGL1 1544 aa15.96■□□□□ 0.15
PDGFD-201ENST00000302251 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
PDGFD-201ENST00000302251 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
PDGFD-201ENST00000302251 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
PDGFD-201ENST00000302251 PBRM1Q86U86 1689 aa15.93■□□□□ 0.14
PDGFD-201ENST00000302251 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.14
PDGFD-201ENST00000302251 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
PDGFD-201ENST00000302251 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
PDGFD-201ENST00000302251 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
PDGFD-201ENST00000302251 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
PDGFD-201ENST00000302251 PLIN1O60240 522 aa15.91■□□□□ 0.14
PDGFD-201ENST00000302251 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
PDGFD-201ENST00000302251 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
PDGFD-201ENST00000302251 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
PDGFD-201ENST00000302251 SPRYD3Q8NCJ5 442 aa15.91■□□□□ 0.14
PDGFD-201ENST00000302251 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
PDGFD-201ENST00000302251 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
PDGFD-201ENST00000302251 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
PDGFD-201ENST00000302251 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
PDGFD-201ENST00000302251 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
PDGFD-201ENST00000302251 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
PDGFD-201ENST00000302251 PDE4AP27815 886 aa15.88■□□□□ 0.13
PDGFD-201ENST00000302251 PTPRKQ15262 1439 aa15.87■□□□□ 0.13
PDGFD-201ENST00000302251 NAP1L5Q96NT1 182 aaPredicted RBP15.87■□□□□ 0.13
PDGFD-201ENST00000302251 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
PDGFD-201ENST00000302251 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
PDGFD-201ENST00000302251 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
PDGFD-201ENST00000302251 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
PDGFD-201ENST00000302251 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
PDGFD-201ENST00000302251 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
PDGFD-201ENST00000302251 DENND4BO75064 1496 aaPredicted RBP15.86■□□□□ 0.13
PDGFD-201ENST00000302251 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
PDGFD-201ENST00000302251 FRAT1Q92837 279 aaPredicted RBP15.86■□□□□ 0.13
PDGFD-201ENST00000302251 SLKQ9H2G2 1235 aaPredicted RBP15.86■□□□□ 0.13
PDGFD-201ENST00000302251 CHGAP10645 457 aaKnown RBP15.85■□□□□ 0.13
PDGFD-201ENST00000302251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDGFD-201ENST00000302251 BECN1Q14457 450 aa15.84■□□□□ 0.13
PDGFD-201ENST00000302251 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
PDGFD-201ENST00000302251 PKD2Q13563 968 aa15.81■□□□□ 0.12
PDGFD-201ENST00000302251 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
PDGFD-201ENST00000302251 GZF1Q9H116 711 aaPredicted RBP15.81■□□□□ 0.12
PDGFD-201ENST00000302251 PTPN23Q9H3S7 1636 aa15.8■□□□□ 0.12
PDGFD-201ENST00000302251 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
PDGFD-201ENST00000302251 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
PDGFD-201ENST00000302251 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
PDGFD-201ENST00000302251 CCDC18Q5T9S5 1454 aa15.79■□□□□ 0.12
PDGFD-201ENST00000302251 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.12
PDGFD-201ENST00000302251 TRIM44Q96DX7 344 aaPredicted RBP15.77■□□□□ 0.11
PDGFD-201ENST00000302251 KDM6BO15054 1643 aa15.77■□□□□ 0.11
PDGFD-201ENST00000302251 PRKCSHP14314 528 aaPredicted RBP15.75■□□□□ 0.11
PDGFD-201ENST00000302251 BRPF3Q9ULD4 1205 aa15.75■□□□□ 0.11
PDGFD-201ENST00000302251 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
PDGFD-201ENST00000302251 GSE1Q14687 1217 aa15.75■□□□□ 0.11
PDGFD-201ENST00000302251 AKNAQ7Z591 1439 aa15.74■□□□□ 0.11
PDGFD-201ENST00000302251 GCC2Q8IWJ2 1684 aa15.74■□□□□ 0.11
PDGFD-201ENST00000302251 RRP1P56182 461 aaKnown RBP15.74■□□□□ 0.11
PDGFD-201ENST00000302251 FGD6Q6ZV73 1430 aa15.74■□□□□ 0.11
PDGFD-201ENST00000302251 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
PDGFD-201ENST00000302251 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
PDGFD-201ENST00000302251 UGGT2Q9NYU1 1516 aa15.73■□□□□ 0.11
PDGFD-201ENST00000302251 CHMP7Q8WUX9 453 aaPredicted RBP15.73■□□□□ 0.11
PDGFD-201ENST00000302251 CRBNQ96SW2 442 aa15.72■□□□□ 0.11
PDGFD-201ENST00000302251 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
PDGFD-201ENST00000302251 SKAP1Q86WV1 359 aa15.71■□□□□ 0.1
PDGFD-201ENST00000302251 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
PDGFD-201ENST00000302251 HFM1A2PYH4 1435 aa15.7■□□□□ 0.1
PDGFD-201ENST00000302251 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
PDGFD-201ENST00000302251 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
PDGFD-201ENST00000302251 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
PDGFD-201ENST00000302251 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
PDGFD-201ENST00000302251 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
PDGFD-201ENST00000302251 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
PDGFD-201ENST00000302251 SUPT6HQ7KZ85 1726 aaKnown RBP15.68■□□□□ 0.1
PDGFD-201ENST00000302251 NAIPQ13075 1403 aa15.68■□□□□ 0.1
PDGFD-201ENST00000302251 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
PDGFD-201ENST00000302251 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
PDGFD-201ENST00000302251 TPRNQ4KMQ1 711 aa15.67■□□□□ 0.1
PDGFD-201ENST00000302251 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
PDGFD-201ENST00000302251 TCOF1Q13428 1488 aaKnown RBP15.67■□□□□ 0.1
PDGFD-201ENST00000302251 NFKBIBQ15653 356 aa15.66■□□□□ 0.1
PDGFD-201ENST00000302251 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
PDGFD-201ENST00000302251 RALBP1Q15311 655 aa15.66■□□□□ 0.1
PDGFD-201ENST00000302251 UACAQ9BZF9 1416 aa15.65■□□□□ 0.1
PDGFD-201ENST00000302251 NCOA2Q15596 1464 aa15.65■□□□□ 0.1
PDGFD-201ENST00000302251 NLRP13Q86W25 1043 aa15.65■□□□□ 0.1
PDGFD-201ENST00000302251 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
PDGFD-201ENST00000302251 WDR62O43379 1518 aa15.65■□□□□ 0.1
PDGFD-201ENST00000302251 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
PDGFD-201ENST00000302251 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
PDGFD-201ENST00000302251 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
PDGFD-201ENST00000302251 TMF1P82094 1093 aa15.62■□□□□ 0.09
PDGFD-201ENST00000302251 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms