RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 RTN4Q9NQC3 1192 aaKnown RBP15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 PRG4Q92954 1404 aaPredicted RBP15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
ATP1A3-201ENST00000302102 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.03
ATP1A3-201ENST00000302102 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
ATP1A3-201ENST00000302102 TIMELESSQ9UNS1 1208 aa15.26■□□□□ 0.03
ATP1A3-201ENST00000302102 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
ATP1A3-201ENST00000302102 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
ATP1A3-201ENST00000302102 PKD2Q13563 968 aa15.26■□□□□ 0.03
ATP1A3-201ENST00000302102 PLEKHD1A6NEE1 506 aa15.25■□□□□ 0.03
ATP1A3-201ENST00000302102 ARXQ96QS3 562 aa15.24■□□□□ 0.03
ATP1A3-201ENST00000302102 PTPRGP23470 1445 aa15.23■□□□□ 0.03
ATP1A3-201ENST00000302102 PCF11O94913 1555 aaKnown RBP15.23■□□□□ 0.03
ATP1A3-201ENST00000302102 CCDC18Q5T9S5 1454 aa15.23■□□□□ 0.03
ATP1A3-201ENST00000302102 PRKRIP1Q9H875 184 aaPredicted RBP15.23■□□□□ 0.03
ATP1A3-201ENST00000302102 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
ATP1A3-201ENST00000302102 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
ATP1A3-201ENST00000302102 CHGAP10645 457 aaKnown RBP15.21■□□□□ 0.03
ATP1A3-201ENST00000302102 EFCAB5A4FU69 1503 aa15.21■□□□□ 0.02
ATP1A3-201ENST00000302102 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.02
ATP1A3-201ENST00000302102 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
ATP1A3-201ENST00000302102 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
ATP1A3-201ENST00000302102 CDK13Q14004 1512 aaKnown RBP15.19■□□□□ 0.02
ATP1A3-201ENST00000302102 CANXP27824 592 aaKnown RBP15.17■□□□□ 0.02
ATP1A3-201ENST00000302102 NBPF8Q3BBV2 869 aa15.17■□□□□ 0.02
ATP1A3-201ENST00000302102 FGD6Q6ZV73 1430 aa15.17■□□□□ 0.02
ATP1A3-201ENST00000302102 DEKP35659 375 aaKnown RBP15.16■□□□□ 0.02
ATP1A3-201ENST00000302102 MSH5O43196 834 aa15.16■□□□□ 0.02
ATP1A3-201ENST00000302102 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
ATP1A3-201ENST00000302102 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
ATP1A3-201ENST00000302102 PLIN1O60240 522 aa15.15■□□□□ 0.02
ATP1A3-201ENST00000302102 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATP1A3-201ENST00000302102 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
ATP1A3-201ENST00000302102 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
ATP1A3-201ENST00000302102 NUP160Q12769 1436 aa15.14■□□□□ 0.01
ATP1A3-201ENST00000302102 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
ATP1A3-201ENST00000302102 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
ATP1A3-201ENST00000302102 ST20-MTHFSA0A0A6YYL1 179 aa15.13■□□□□ 0.01
ATP1A3-201ENST00000302102 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
ATP1A3-201ENST00000302102 RGS3P49796 1198 aa15.13■□□□□ 0.01
ATP1A3-201ENST00000302102 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.01
ATP1A3-201ENST00000302102 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
ATP1A3-201ENST00000302102 CHD1O14646 1710 aa15.09■□□□□ 0.01
ATP1A3-201ENST00000302102 MAPKBP1O60336 1514 aa15.09■□□□□ 0.01
ATP1A3-201ENST00000302102 EPRSP07814 1512 aaKnown RBP15.08■□□□□ 0.01
ATP1A3-201ENST00000302102 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0
ATP1A3-201ENST00000302102 WDR43Q15061 677 aaKnown RBP eCLIP15.08■□□□□ 0
ATP1A3-201ENST00000302102 NUP155O75694 1391 aa15.08■□□□□ 0
ATP1A3-201ENST00000302102 SKAP1Q86WV1 359 aa15.08■□□□□ 0
ATP1A3-201ENST00000302102 KIAA0556O60303 1618 aa15.07■□□□□ 0
ATP1A3-201ENST00000302102 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
ATP1A3-201ENST00000302102 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
ATP1A3-201ENST00000302102 SLC4A3P48751 1232 aa15.06■□□□□ 0
ATP1A3-201ENST00000302102 NEFMP07197 916 aa15.06■□□□□ 0
ATP1A3-201ENST00000302102 EXOC6Q8TAG9 804 aa15.06■□□□□ 0
ATP1A3-201ENST00000302102 UACAQ9BZF9 1416 aa15.06■□□□□ 0
ATP1A3-201ENST00000302102 NCOA2Q15596 1464 aa15.05■□□□□ 0
ATP1A3-201ENST00000302102 SAMD9Q5K651 1589 aa15.05■□□□□ 0
ATP1A3-201ENST00000302102 AKNAQ7Z591 1439 aa15.05■□□□□ -0
ATP1A3-201ENST00000302102 PTPRKQ15262 1439 aa15.04■□□□□ -0
ATP1A3-201ENST00000302102 NUDCQ9Y266 331 aa15.04■□□□□ -0
ATP1A3-201ENST00000302102 CCDC7Q96M83 1385 aa15.03■□□□□ -0
ATP1A3-201ENST00000302102 ERCC6L2Q5T890 1561 aa15.03■□□□□ -0
ATP1A3-201ENST00000302102 MYOM3Q5VTT5 1437 aa15.02■□□□□ -0
ATP1A3-201ENST00000302102 NUP153P49790 1475 aaKnown RBP15.02■□□□□ -0
ATP1A3-201ENST00000302102 RCAN3Q9UKA8 241 aa15.01□□□□□ -0.01
ATP1A3-201ENST00000302102 HECW1Q76N89 1606 aa15.01□□□□□ -0.01
ATP1A3-201ENST00000302102 CDCA7LQ96GN5 454 aa15□□□□□ -0.01
ATP1A3-201ENST00000302102 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
ATP1A3-201ENST00000302102 NAIPQ13075 1403 aa14.99□□□□□ -0.01
ATP1A3-201ENST00000302102 USP47Q96K76 1375 aa14.99□□□□□ -0.01
ATP1A3-201ENST00000302102 CCDC146Q8IYE0 955 aa14.99□□□□□ -0.01
ATP1A3-201ENST00000302102 FRAT1Q92837 279 aaPredicted RBP14.98□□□□□ -0.01
ATP1A3-201ENST00000302102 KNSTRNQ9Y448 316 aa14.98□□□□□ -0.01
ATP1A3-201ENST00000302102 ROCK2O75116 1388 aaKnown RBP14.96□□□□□ -0.01
ATP1A3-201ENST00000302102 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.02
ATP1A3-201ENST00000302102 MAGI3Q5TCQ9 1506 aa14.95□□□□□ -0.02
ATP1A3-201ENST00000302102 ATP10BO94823 1461 aa14.95□□□□□ -0.02
ATP1A3-201ENST00000302102 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
ATP1A3-201ENST00000302102 HFM1A2PYH4 1435 aa14.93□□□□□ -0.02
ATP1A3-201ENST00000302102 TROQ12816 1431 aaPredicted RBP14.93□□□□□ -0.02
ATP1A3-201ENST00000302102 SAFB2Q14151 953 aaKnown RBP eCLIP14.93□□□□□ -0.02
ATP1A3-201ENST00000302102 NBPF1Q3BBV0 1214 aa14.93□□□□□ -0.02
ATP1A3-201ENST00000302102 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
ATP1A3-201ENST00000302102 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
ATP1A3-201ENST00000302102 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
ATP1A3-201ENST00000302102 PANK3Q9H999 370 aa14.92□□□□□ -0.02
ATP1A3-201ENST00000302102 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
ATP1A3-201ENST00000302102 ARHGEF11O15085 1522 aa14.91□□□□□ -0.02
ATP1A3-201ENST00000302102 MAP3K1Q13233 1512 aa14.9□□□□□ -0.02
ATP1A3-201ENST00000302102 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.9□□□□□ -0.02
ATP1A3-201ENST00000302102 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
ATP1A3-201ENST00000302102 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
ATP1A3-201ENST00000302102 CFAP43Q8NDM7 1665 aa14.88□□□□□ -0.03
ATP1A3-201ENST00000302102 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
ATP1A3-201ENST00000302102 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms