RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
LRRC28-201ENST00000301981 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
LRRC28-201ENST00000301981 NUDCQ9Y266 331 aa10.06□□□□□ -0.8
LRRC28-201ENST00000301981 DDRGK1Q96HY6 314 aa10.06□□□□□ -0.8
LRRC28-201ENST00000301981 PLEKHD1A6NEE1 506 aa10.06□□□□□ -0.8
LRRC28-201ENST00000301981 ST20-MTHFSA0A0A6YYL1 179 aa10.05□□□□□ -0.8
LRRC28-201ENST00000301981 BCL2L13Q9BXK5 485 aa10.05□□□□□ -0.8
LRRC28-201ENST00000301981 RRP7AQ9Y3A4 280 aaKnown RBP10.05□□□□□ -0.8
LRRC28-201ENST00000301981 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
LRRC28-201ENST00000301981 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
LRRC28-201ENST00000301981 APBB1O00213 710 aa10.04□□□□□ -0.8
LRRC28-201ENST00000301981 U2SURPO15042 1029 aaKnown RBP10.04□□□□□ -0.8
LRRC28-201ENST00000301981 HNRNPMP52272 730 aaKnown RBP eCLIP10.04□□□□□ -0.8
LRRC28-201ENST00000301981 CRBNQ96SW2 442 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 ARAP1Q96P48 1450 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 ERCC6Q03468 1493 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 SOX12O15370 315 aa10.03□□□□□ -0.8
LRRC28-201ENST00000301981 PDE4AP27815 886 aa10.02□□□□□ -0.8
LRRC28-201ENST00000301981 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-201ENST00000301981 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
LRRC28-201ENST00000301981 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
LRRC28-201ENST00000301981 FTSJ3Q8IY81 847 aaKnown RBP10.02□□□□□ -0.81
LRRC28-201ENST00000301981 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.81
LRRC28-201ENST00000301981 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
LRRC28-201ENST00000301981 BECN1Q14457 450 aa10□□□□□ -0.81
LRRC28-201ENST00000301981 ANP32BQ92688 251 aaKnown RBP10□□□□□ -0.81
LRRC28-201ENST00000301981 SYNJ1O43426 1573 aa9.99□□□□□ -0.81
LRRC28-201ENST00000301981 ROCK2O75116 1388 aaKnown RBP9.99□□□□□ -0.81
LRRC28-201ENST00000301981 NUP155O75694 1391 aa9.99□□□□□ -0.81
LRRC28-201ENST00000301981 KIF7Q2M1P5 1343 aa9.99□□□□□ -0.81
LRRC28-201ENST00000301981 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
LRRC28-201ENST00000301981 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
LRRC28-201ENST00000301981 STK26Q9P289 416 aa9.97□□□□□ -0.81
LRRC28-201ENST00000301981 TRIM44Q96DX7 344 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-201ENST00000301981 NBPF8Q3BBV2 869 aa9.97□□□□□ -0.81
LRRC28-201ENST00000301981 PANK3Q9H999 370 aa9.97□□□□□ -0.81
LRRC28-201ENST00000301981 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.81
LRRC28-201ENST00000301981 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.81
LRRC28-201ENST00000301981 RRP1P56182 461 aaKnown RBP9.96□□□□□ -0.81
LRRC28-201ENST00000301981 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
LRRC28-201ENST00000301981 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
LRRC28-201ENST00000301981 TMF1P82094 1093 aa9.95□□□□□ -0.82
LRRC28-201ENST00000301981 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
LRRC28-201ENST00000301981 RAD54L2Q9Y4B4 1467 aa9.95□□□□□ -0.82
LRRC28-201ENST00000301981 ATAD2BQ9ULI0 1458 aa9.94□□□□□ -0.82
LRRC28-201ENST00000301981 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
LRRC28-201ENST00000301981 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
LRRC28-201ENST00000301981 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
LRRC28-201ENST00000301981 TCERG1O14776 1098 aaKnown RBP9.93□□□□□ -0.82
LRRC28-201ENST00000301981 AMER1Q5JTC6 1135 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-201ENST00000301981 IGF1RP08069 1367 aa9.93□□□□□ -0.82
LRRC28-201ENST00000301981 HSP90AB1P08238 724 aaKnown RBP9.93□□□□□ -0.82
LRRC28-201ENST00000301981 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
LRRC28-201ENST00000301981 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
LRRC28-201ENST00000301981 USP47Q96K76 1375 aa9.92□□□□□ -0.82
LRRC28-201ENST00000301981 CCDC7Q96M83 1385 aa9.91□□□□□ -0.82
LRRC28-201ENST00000301981 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
LRRC28-201ENST00000301981 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
LRRC28-201ENST00000301981 ELL2O00472 640 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-201ENST00000301981 ITPRIPQ8IWB1 547 aa9.9□□□□□ -0.82
LRRC28-201ENST00000301981 FOXD4L6Q3SYB3 417 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-201ENST00000301981 FOXD4L3Q6VB84 417 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-201ENST00000301981 ERICH6BQ5W0A0 696 aa9.89□□□□□ -0.83
LRRC28-201ENST00000301981 APAF1O14727 1248 aa9.89□□□□□ -0.83
LRRC28-201ENST00000301981 U2AF1L5P0DN76 240 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-201ENST00000301981 U2AF1Q01081 240 aaKnown RBP eCLIP9.89□□□□□ -0.83
LRRC28-201ENST00000301981 LRRC9Q6ZRR7 1453 aa9.88□□□□□ -0.83
LRRC28-201ENST00000301981 GGT6Q6P531 493 aa9.88□□□□□ -0.83
LRRC28-201ENST00000301981 MYH16Q9H6N6 1097 aa9.88□□□□□ -0.83
LRRC28-201ENST00000301981 DNTTIP2Q5QJE6 756 aaKnown RBP9.88□□□□□ -0.83
LRRC28-201ENST00000301981 GSE1Q14687 1217 aa9.88□□□□□ -0.83
LRRC28-201ENST00000301981 PTMAP06454 111 aaKnown RBP9.87□□□□□ -0.83
LRRC28-201ENST00000301981 GOLGA2Q08379 1002 aa9.87□□□□□ -0.83
LRRC28-201ENST00000301981 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
LRRC28-201ENST00000301981 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
LRRC28-201ENST00000301981 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
LRRC28-201ENST00000301981 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
LRRC28-201ENST00000301981 SRPK2P78362 688 aaKnown RBP9.87□□□□□ -0.83
LRRC28-201ENST00000301981 RALBP1Q15311 655 aa9.87□□□□□ -0.83
LRRC28-201ENST00000301981 MYBBP1AQ9BQG0 1328 aaKnown RBP9.87□□□□□ -0.83
LRRC28-201ENST00000301981 FRAT2O75474 233 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-201ENST00000301981 MLECQ14165 292 aa9.86□□□□□ -0.83
LRRC28-201ENST00000301981 NFKBIBQ15653 356 aa9.86□□□□□ -0.83
LRRC28-201ENST00000301981 CFAP53Q96M91 514 aa9.86□□□□□ -0.83
LRRC28-201ENST00000301981 TRAK1Q9UPV9 953 aa9.86□□□□□ -0.83
LRRC28-201ENST00000301981 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
LRRC28-201ENST00000301981 FGD6Q6ZV73 1430 aa9.86□□□□□ -0.83
LRRC28-201ENST00000301981 C20orf194Q5TEA3 1177 aa9.85□□□□□ -0.83
LRRC28-201ENST00000301981 ADAMTS8Q9UP79 889 aa9.85□□□□□ -0.83
LRRC28-201ENST00000301981 RRBP1Q9P2E9 1410 aaKnown RBP9.85□□□□□ -0.83
LRRC28-201ENST00000301981 CNTLNQ9NXG0 1405 aa9.85□□□□□ -0.83
LRRC28-201ENST00000301981 A0A0G2JS52 829 aa9.85□□□□□ -0.83
LRRC28-201ENST00000301981 HSCBQ8IWL3 235 aa9.85□□□□□ -0.83
LRRC28-201ENST00000301981 DCAF8L1A6NGE4 600 aa9.85□□□□□ -0.83
LRRC28-201ENST00000301981 POGKQ9P215 609 aa9.84□□□□□ -0.83
LRRC28-201ENST00000301981 CFTRP13569 1480 aa9.84□□□□□ -0.83
LRRC28-201ENST00000301981 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms