RNA–Protein interactions for RNA: ENST00000300954.9

PCSK4-201, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK4, Length 2,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-201ENST00000300954 KDM5BQ9UGL1 1544 aa23.44■■□□□ 1.34
PCSK4-201ENST00000300954 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
PCSK4-201ENST00000300954 ABCA8O94911 1581 aa23.41■■□□□ 1.34
PCSK4-201ENST00000300954 ITSN2Q9NZM3 1697 aa23.4■■□□□ 1.34
PCSK4-201ENST00000300954 KIF14Q15058 1648 aa23.4■■□□□ 1.34
PCSK4-201ENST00000300954 GPATCH8Q9UKJ3 1502 aaKnown RBP23.38■■□□□ 1.33
PCSK4-201ENST00000300954 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
PCSK4-201ENST00000300954 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
PCSK4-201ENST00000300954 MPHOSPH9Q99550 1183 aa23.34■■□□□ 1.33
PCSK4-201ENST00000300954 ATP10BO94823 1461 aa23.31■■□□□ 1.32
PCSK4-201ENST00000300954 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
PCSK4-201ENST00000300954 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
PCSK4-201ENST00000300954 CROCC2H7BZ55 1655 aa23.29■■□□□ 1.32
PCSK4-201ENST00000300954 HIRIP3Q9BW71 556 aaPredicted RBP23.29■■□□□ 1.32
PCSK4-201ENST00000300954 ADGBQ8N7X0 1667 aa23.29■■□□□ 1.32
PCSK4-201ENST00000300954 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.32
PCSK4-201ENST00000300954 CDC42BPAQ5VT25 1732 aa23.27■■□□□ 1.32
PCSK4-201ENST00000300954 CHD1O14646 1710 aa23.26■■□□□ 1.31
PCSK4-201ENST00000300954 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
PCSK4-201ENST00000300954 ADGRL2O95490 1459 aa23.25■■□□□ 1.31
PCSK4-201ENST00000300954 NCOA1Q15788 1441 aa23.25■■□□□ 1.31
PCSK4-201ENST00000300954 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
PCSK4-201ENST00000300954 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
PCSK4-201ENST00000300954 FOXD1Q16676 465 aa23.21■■□□□ 1.31
PCSK4-201ENST00000300954 PTPRGP23470 1445 aa23.2■■□□□ 1.3
PCSK4-201ENST00000300954 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
PCSK4-201ENST00000300954 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
PCSK4-201ENST00000300954 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
PCSK4-201ENST00000300954 PZPP20742 1482 aa23.18■■□□□ 1.3
PCSK4-201ENST00000300954 ZNF777Q9ULD5 760 aaPredicted RBP23.18■■□□□ 1.3
PCSK4-201ENST00000300954 L3MBTL2Q969R5 705 aa23.15■■□□□ 1.3
PCSK4-201ENST00000300954 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
PCSK4-201ENST00000300954 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
PCSK4-201ENST00000300954 TEX14Q8IWB6 1497 aa23.13■■□□□ 1.29
PCSK4-201ENST00000300954 ANKRD30AQ9BXX3 1397 aa23.13■■□□□ 1.29
PCSK4-201ENST00000300954 HSPA5P11021 654 aaKnown RBP23.08■■□□□ 1.29
PCSK4-201ENST00000300954 ARHGEF5Q12774 1597 aa23.07■■□□□ 1.28
PCSK4-201ENST00000300954 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
PCSK4-201ENST00000300954 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
PCSK4-201ENST00000300954 ANKRD50Q9ULJ7 1429 aa23.07■■□□□ 1.28
PCSK4-201ENST00000300954 CDC42BPBQ9Y5S2 1711 aa23.06■■□□□ 1.28
PCSK4-201ENST00000300954 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
PCSK4-201ENST00000300954 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
PCSK4-201ENST00000300954 ANP32CO43423 234 aa23.05■■□□□ 1.28
PCSK4-201ENST00000300954 ERCC6L2Q5T890 1561 aa23.04■■□□□ 1.28
PCSK4-201ENST00000300954 KIAA1107Q9UPP5 1409 aa23.04■■□□□ 1.28
PCSK4-201ENST00000300954 SAMD9LQ8IVG5 1584 aa23.03■■□□□ 1.28
PCSK4-201ENST00000300954 EIF4G2P78344 907 aaKnown RBP eCLIP23.03■■□□□ 1.28
PCSK4-201ENST00000300954 NBPF8Q3BBV2 869 aa23.03■■□□□ 1.28
PCSK4-201ENST00000300954 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.27
PCSK4-201ENST00000300954 KDM5DQ9BY66 1539 aa22.99■■□□□ 1.27
PCSK4-201ENST00000300954 ABCC2Q92887 1545 aa22.99■■□□□ 1.27
PCSK4-201ENST00000300954 HNRNPMP52272 730 aaKnown RBP eCLIP22.98■■□□□ 1.27
PCSK4-201ENST00000300954 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
PCSK4-201ENST00000300954 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
PCSK4-201ENST00000300954 PKD2Q13563 968 aa22.96■■□□□ 1.27
PCSK4-201ENST00000300954 TTC37Q6PGP7 1564 aa22.96■■□□□ 1.27
PCSK4-201ENST00000300954 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
PCSK4-201ENST00000300954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.27
PCSK4-201ENST00000300954 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.26
PCSK4-201ENST00000300954 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
PCSK4-201ENST00000300954 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
PCSK4-201ENST00000300954 NUP155O75694 1391 aa22.92■■□□□ 1.26
PCSK4-201ENST00000300954 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
PCSK4-201ENST00000300954 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
PCSK4-201ENST00000300954 MAST1Q9Y2H9 1570 aa22.9■■□□□ 1.26
PCSK4-201ENST00000300954 POLR1AO95602 1720 aaPredicted RBP22.89■■□□□ 1.26
PCSK4-201ENST00000300954 SYCP2Q9BX26 1530 aa22.88■■□□□ 1.25
PCSK4-201ENST00000300954 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
PCSK4-201ENST00000300954 CCDC7Q96M83 1385 aa22.88■■□□□ 1.25
PCSK4-201ENST00000300954 CNTLNQ9NXG0 1405 aa22.88■■□□□ 1.25
PCSK4-201ENST00000300954 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
PCSK4-201ENST00000300954 SUPT16HQ9Y5B9 1047 aaKnown RBP22.86■■□□□ 1.25
PCSK4-201ENST00000300954 UHRF1BP1LA0JNW5 1464 aa22.86■■□□□ 1.25
PCSK4-201ENST00000300954 ZCCHC11Q5TAX3 1644 aaKnown RBP22.85■■□□□ 1.25
PCSK4-201ENST00000300954 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
PCSK4-201ENST00000300954 FAM135AQ9P2D6 1515 aa22.81■■□□□ 1.24
PCSK4-201ENST00000300954 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
PCSK4-201ENST00000300954 ARHGEF12Q9NZN5 1544 aa22.8■■□□□ 1.24
PCSK4-201ENST00000300954 PLXNC1O60486 1568 aa22.8■■□□□ 1.24
PCSK4-201ENST00000300954 UNC13BO14795 1591 aa22.79■■□□□ 1.24
PCSK4-201ENST00000300954 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
PCSK4-201ENST00000300954 PLCH2O75038 1416 aa22.77■■□□□ 1.24
PCSK4-201ENST00000300954 KDM5CP41229 1560 aa22.77■■□□□ 1.23
PCSK4-201ENST00000300954 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
PCSK4-201ENST00000300954 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
PCSK4-201ENST00000300954 USP47Q96K76 1375 aa22.73■■□□□ 1.23
PCSK4-201ENST00000300954 IQGAP3Q86VI3 1631 aa22.7■■□□□ 1.22
PCSK4-201ENST00000300954 PRKRIP1Q9H875 184 aaPredicted RBP22.7■■□□□ 1.22
PCSK4-201ENST00000300954 ABCC1P33527 1531 aa22.69■■□□□ 1.22
PCSK4-201ENST00000300954 DUOX2Q9NRD8 1548 aa22.69■■□□□ 1.22
PCSK4-201ENST00000300954 ZNF326Q5BKZ1 582 aaKnown RBP22.69■■□□□ 1.22
PCSK4-201ENST00000300954 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
PCSK4-201ENST00000300954 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
PCSK4-201ENST00000300954 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
PCSK4-201ENST00000300954 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
PCSK4-201ENST00000300954 ERBINQ96RT1 1412 aa22.65■■□□□ 1.22
PCSK4-201ENST00000300954 ARAP3Q8WWN8 1544 aa22.65■■□□□ 1.22
PCSK4-201ENST00000300954 ARID4BQ4LE39 1312 aaPredicted RBP22.64■■□□□ 1.21
PCSK4-201ENST00000300954 TRAPPC8Q9Y2L5 1435 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms