RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 PLIN1O60240 522 aa14.62□□□□□ -0.07
SNX20-201ENST00000300590 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
SNX20-201ENST00000300590 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
SNX20-201ENST00000300590 RNF123Q5XPI4 1314 aa14.6□□□□□ -0.07
SNX20-201ENST00000300590 NFKBIBQ15653 356 aa14.6□□□□□ -0.07
SNX20-201ENST00000300590 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
SNX20-201ENST00000300590 WASHC2CQ9Y4E1 1318 aa14.59□□□□□ -0.07
SNX20-201ENST00000300590 RCAN3Q9UKA8 241 aa14.58□□□□□ -0.07
SNX20-201ENST00000300590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNX20-201ENST00000300590 PNISRQ8TF01 805 aaKnown RBP14.58□□□□□ -0.08
SNX20-201ENST00000300590 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
SNX20-201ENST00000300590 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
SNX20-201ENST00000300590 CASKIN1Q8WXD9 1431 aa14.54□□□□□ -0.08
SNX20-201ENST00000300590 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
SNX20-201ENST00000300590 CFAP43Q8NDM7 1665 aa14.53□□□□□ -0.08
SNX20-201ENST00000300590 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.09
SNX20-201ENST00000300590 ARXQ96QS3 562 aa14.52□□□□□ -0.09
SNX20-201ENST00000300590 FYCO1Q9BQS8 1478 aa14.51□□□□□ -0.09
SNX20-201ENST00000300590 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
SNX20-201ENST00000300590 MYOM3Q5VTT5 1437 aa14.51□□□□□ -0.09
SNX20-201ENST00000300590 CFTRP13569 1480 aa14.5□□□□□ -0.09
SNX20-201ENST00000300590 FRAT2O75474 233 aaPredicted RBP14.5□□□□□ -0.09
SNX20-201ENST00000300590 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
SNX20-201ENST00000300590 DENND4BO75064 1496 aaPredicted RBP14.49□□□□□ -0.09
SNX20-201ENST00000300590 MS4A1P11836 297 aa14.49□□□□□ -0.09
SNX20-201ENST00000300590 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
SNX20-201ENST00000300590 DHX29Q7Z478 1369 aaKnown RBP14.49□□□□□ -0.09
SNX20-201ENST00000300590 KDM2AQ9Y2K7 1162 aa14.48□□□□□ -0.09
SNX20-201ENST00000300590 RGS3P49796 1198 aa14.46□□□□□ -0.09
SNX20-201ENST00000300590 USP47Q96K76 1375 aa14.45□□□□□ -0.1
SNX20-201ENST00000300590 DCAF11Q8TEB1 546 aa14.45□□□□□ -0.1
SNX20-201ENST00000300590 KDM6BO15054 1643 aa14.44□□□□□ -0.1
SNX20-201ENST00000300590 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
SNX20-201ENST00000300590 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
SNX20-201ENST00000300590 CARD11Q9BXL7 1154 aa14.42□□□□□ -0.1
SNX20-201ENST00000300590 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
SNX20-201ENST00000300590 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
SNX20-201ENST00000300590 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
SNX20-201ENST00000300590 ST20-MTHFSA0A0A6YYL1 179 aa14.4□□□□□ -0.1
SNX20-201ENST00000300590 ZNF644Q9H582 1327 aaPredicted RBP14.4□□□□□ -0.1
SNX20-201ENST00000300590 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
SNX20-201ENST00000300590 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
SNX20-201ENST00000300590 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
SNX20-201ENST00000300590 MYBBP1AQ9BQG0 1328 aaKnown RBP14.38□□□□□ -0.11
SNX20-201ENST00000300590 RPRD2Q5VT52 1461 aaKnown RBP14.37□□□□□ -0.11
SNX20-201ENST00000300590 POGKQ9P215 609 aa14.36□□□□□ -0.11
SNX20-201ENST00000300590 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
SNX20-201ENST00000300590 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
SNX20-201ENST00000300590 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
SNX20-201ENST00000300590 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
SNX20-201ENST00000300590 PKD2Q13563 968 aa14.35□□□□□ -0.11
SNX20-201ENST00000300590 FAM43AQ8N2R8 423 aa14.35□□□□□ -0.11
SNX20-201ENST00000300590 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
SNX20-201ENST00000300590 TEX14Q8IWB6 1497 aa14.34□□□□□ -0.11
SNX20-201ENST00000300590 RALBP1Q15311 655 aa14.33□□□□□ -0.11
SNX20-201ENST00000300590 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
SNX20-201ENST00000300590 NLRP13Q86W25 1043 aa14.32□□□□□ -0.12
SNX20-201ENST00000300590 BRD4O60885 1362 aaPredicted RBP14.32□□□□□ -0.12
SNX20-201ENST00000300590 LRPPRCP42704 1394 aaKnown RBP14.32□□□□□ -0.12
SNX20-201ENST00000300590 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
SNX20-201ENST00000300590 C8orf34Q49A92 452 aa14.31□□□□□ -0.12
SNX20-201ENST00000300590 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
SNX20-201ENST00000300590 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
SNX20-201ENST00000300590 NAP1L5Q96NT1 182 aaPredicted RBP14.31□□□□□ -0.12
SNX20-201ENST00000300590 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
SNX20-201ENST00000300590 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
SNX20-201ENST00000300590 MIA2Q96PC5 1412 aa14.3□□□□□ -0.12
SNX20-201ENST00000300590 SUPT6HQ7KZ85 1726 aaKnown RBP14.3□□□□□ -0.12
SNX20-201ENST00000300590 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
SNX20-201ENST00000300590 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
SNX20-201ENST00000300590 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
SNX20-201ENST00000300590 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
SNX20-201ENST00000300590 PLEKHG5O94827 1062 aa14.27□□□□□ -0.12
SNX20-201ENST00000300590 CENPQQ7L2Z9 268 aaPredicted RBP14.27□□□□□ -0.12
SNX20-201ENST00000300590 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
SNX20-201ENST00000300590 UGGT2Q9NYU1 1516 aa14.26□□□□□ -0.13
SNX20-201ENST00000300590 ROCK2O75116 1388 aaKnown RBP14.26□□□□□ -0.13
SNX20-201ENST00000300590 KTN1Q86UP2 1357 aaKnown RBP14.26□□□□□ -0.13
SNX20-201ENST00000300590 EHBP1L1Q8N3D4 1523 aa14.26□□□□□ -0.13
SNX20-201ENST00000300590 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
SNX20-201ENST00000300590 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
SNX20-201ENST00000300590 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
SNX20-201ENST00000300590 RGL3Q3MIN7 710 aa14.25□□□□□ -0.13
SNX20-201ENST00000300590 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
SNX20-201ENST00000300590 KDM2BQ8NHM5 1336 aa14.23□□□□□ -0.13
SNX20-201ENST00000300590 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
SNX20-201ENST00000300590 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
SNX20-201ENST00000300590 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
SNX20-201ENST00000300590 SEC24BO95487 1268 aa14.22□□□□□ -0.13
SNX20-201ENST00000300590 CDK13Q14004 1512 aaKnown RBP14.21□□□□□ -0.13
SNX20-201ENST00000300590 GCC2Q8IWJ2 1684 aa14.21□□□□□ -0.14
SNX20-201ENST00000300590 PNNQ9H307 717 aaKnown RBP14.2□□□□□ -0.14
SNX20-201ENST00000300590 DAPK1P53355 1430 aa14.2□□□□□ -0.14
SNX20-201ENST00000300590 PANK3Q9H999 370 aa14.2□□□□□ -0.14
SNX20-201ENST00000300590 ABCC5O15440 1437 aa14.19□□□□□ -0.14
SNX20-201ENST00000300590 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
SNX20-201ENST00000300590 PANK2Q9BZ23 570 aa14.19□□□□□ -0.14
SNX20-201ENST00000300590 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
SNX20-201ENST00000300590 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
SNX20-201ENST00000300590 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms