RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 UGGT2Q9NYU1 1516 aa18.53■□□□□ 0.56
CTDP1-202ENST00000299543 RTN4Q9NQC3 1192 aaKnown RBP18.52■□□□□ 0.56
CTDP1-202ENST00000299543 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
CTDP1-202ENST00000299543 NBR1Q14596 966 aa18.51■□□□□ 0.55
CTDP1-202ENST00000299543 NBPF8Q3BBV2 869 aa18.51■□□□□ 0.55
CTDP1-202ENST00000299543 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
CTDP1-202ENST00000299543 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
CTDP1-202ENST00000299543 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
CTDP1-202ENST00000299543 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
CTDP1-202ENST00000299543 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
CTDP1-202ENST00000299543 KDM6BO15054 1643 aa18.47■□□□□ 0.55
CTDP1-202ENST00000299543 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
CTDP1-202ENST00000299543 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
CTDP1-202ENST00000299543 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
CTDP1-202ENST00000299543 PRKRIP1Q9H875 184 aaPredicted RBP18.42■□□□□ 0.54
CTDP1-202ENST00000299543 DENND4BO75064 1496 aaPredicted RBP18.42■□□□□ 0.54
CTDP1-202ENST00000299543 MIA2Q96PC5 1412 aa18.41■□□□□ 0.54
CTDP1-202ENST00000299543 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
CTDP1-202ENST00000299543 PKD2Q13563 968 aa18.4■□□□□ 0.54
CTDP1-202ENST00000299543 TCOF1Q13428 1488 aaKnown RBP18.39■□□□□ 0.54
CTDP1-202ENST00000299543 DAPK1P53355 1430 aa18.39■□□□□ 0.54
CTDP1-202ENST00000299543 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.54
CTDP1-202ENST00000299543 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.53
CTDP1-202ENST00000299543 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
CTDP1-202ENST00000299543 ARHGEF11O15085 1522 aa18.39■□□□□ 0.53
CTDP1-202ENST00000299543 ABCC5O15440 1437 aa18.38■□□□□ 0.53
CTDP1-202ENST00000299543 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
CTDP1-202ENST00000299543 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
CTDP1-202ENST00000299543 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
CTDP1-202ENST00000299543 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
CTDP1-202ENST00000299543 CNTLNQ9NXG0 1405 aa18.35■□□□□ 0.53
CTDP1-202ENST00000299543 WDR62O43379 1518 aa18.35■□□□□ 0.53
CTDP1-202ENST00000299543 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
CTDP1-202ENST00000299543 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
CTDP1-202ENST00000299543 JPH4Q96JJ6 628 aa18.34■□□□□ 0.53
CTDP1-202ENST00000299543 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.53
CTDP1-202ENST00000299543 B4GALNT3Q6L9W6 998 aa18.33■□□□□ 0.52
CTDP1-202ENST00000299543 NUP153P49790 1475 aaKnown RBP18.32■□□□□ 0.52
CTDP1-202ENST00000299543 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
CTDP1-202ENST00000299543 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
CTDP1-202ENST00000299543 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
CTDP1-202ENST00000299543 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
CTDP1-202ENST00000299543 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
CTDP1-202ENST00000299543 TSPY4P0CV99 314 aa18.29■□□□□ 0.52
CTDP1-202ENST00000299543 TSPY10P0CW01 314 aa18.29■□□□□ 0.52
CTDP1-202ENST00000299543 DISP1Q96F81 1524 aa18.29■□□□□ 0.52
CTDP1-202ENST00000299543 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
CTDP1-202ENST00000299543 RPRD2Q5VT52 1461 aaKnown RBP18.28■□□□□ 0.52
CTDP1-202ENST00000299543 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
CTDP1-202ENST00000299543 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
CTDP1-202ENST00000299543 ROCK1Q13464 1354 aa18.28■□□□□ 0.52
CTDP1-202ENST00000299543 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.523e-6■■■■□ 24
CTDP1-202ENST00000299543 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
CTDP1-202ENST00000299543 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.51
CTDP1-202ENST00000299543 NUP155O75694 1391 aa18.26■□□□□ 0.51
CTDP1-202ENST00000299543 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
CTDP1-202ENST00000299543 RGL3Q3MIN7 710 aa18.24■□□□□ 0.51
CTDP1-202ENST00000299543 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
CTDP1-202ENST00000299543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
CTDP1-202ENST00000299543 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
CTDP1-202ENST00000299543 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
CTDP1-202ENST00000299543 USP47Q96K76 1375 aa18.23■□□□□ 0.51
CTDP1-202ENST00000299543 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
CTDP1-202ENST00000299543 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
CTDP1-202ENST00000299543 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
CTDP1-202ENST00000299543 KIAA0556O60303 1618 aa18.22■□□□□ 0.51
CTDP1-202ENST00000299543 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
CTDP1-202ENST00000299543 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
CTDP1-202ENST00000299543 TEX14Q8IWB6 1497 aa18.19■□□□□ 0.5
CTDP1-202ENST00000299543 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
CTDP1-202ENST00000299543 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
CTDP1-202ENST00000299543 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
CTDP1-202ENST00000299543 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
CTDP1-202ENST00000299543 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
CTDP1-202ENST00000299543 DNMT1P26358 1616 aaKnown RBP18.17■□□□□ 0.5
CTDP1-202ENST00000299543 PZPP20742 1482 aa18.17■□□□□ 0.5
CTDP1-202ENST00000299543 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
CTDP1-202ENST00000299543 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
CTDP1-202ENST00000299543 SPATA31E1Q6ZUB1 1445 aa18.14■□□□□ 0.5
CTDP1-202ENST00000299543 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
CTDP1-202ENST00000299543 KIF14Q15058 1648 aa18.11■□□□□ 0.49
CTDP1-202ENST00000299543 NOP58Q9Y2X3 529 aaKnown RBP18.1■□□□□ 0.49
CTDP1-202ENST00000299543 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.49
CTDP1-202ENST00000299543 KIF15Q9NS87 1388 aa18.08■□□□□ 0.48
CTDP1-202ENST00000299543 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
CTDP1-202ENST00000299543 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
CTDP1-202ENST00000299543 NUDCQ9Y266 331 aa18.07■□□□□ 0.48
CTDP1-202ENST00000299543 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
CTDP1-202ENST00000299543 UBE2Q2Q8WVN8 375 aa18.06■□□□□ 0.48
CTDP1-202ENST00000299543 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
CTDP1-202ENST00000299543 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
CTDP1-202ENST00000299543 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
CTDP1-202ENST00000299543 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
CTDP1-202ENST00000299543 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
CTDP1-202ENST00000299543 ATP10BO94823 1461 aa18.04■□□□□ 0.48
CTDP1-202ENST00000299543 CC2D1BQ5T0F9 858 aaKnown RBP18.03■□□□□ 0.48
CTDP1-202ENST00000299543 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
CTDP1-202ENST00000299543 PTPRGP23470 1445 aa18.03■□□□□ 0.48
CTDP1-202ENST00000299543 BCORL1Q5H9F3 1711 aa17.97■□□□□ 0.47
CTDP1-202ENST00000299543 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms