RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 DCAF1Q9Y4B6 1507 aa9.29□□□□□ -0.92
RAG1-201ENST00000299440 FRAT1Q92837 279 aaPredicted RBP9.28□□□□□ -0.92
RAG1-201ENST00000299440 PKD2Q13563 968 aa9.28□□□□□ -0.92
RAG1-201ENST00000299440 GTF3C3Q9Y5Q9 886 aa9.28□□□□□ -0.92
RAG1-201ENST00000299440 ACIN1Q9UKV3 1341 aaKnown RBP9.28□□□□□ -0.92
RAG1-201ENST00000299440 IRX6P78412 446 aaPredicted RBP9.28□□□□□ -0.92
RAG1-201ENST00000299440 FGD1P98174 961 aa9.28□□□□□ -0.92
RAG1-201ENST00000299440 FOXD1Q16676 465 aa9.28□□□□□ -0.92
RAG1-201ENST00000299440 FHAD1B1AJZ9 1412 aa9.27□□□□□ -0.93
RAG1-201ENST00000299440 SYTL4Q96C24 671 aaPredicted RBP9.27□□□□□ -0.93
RAG1-201ENST00000299440 PNNQ9H307 717 aaKnown RBP9.27□□□□□ -0.93
RAG1-201ENST00000299440 CADPSQ9ULU8 1353 aa9.26□□□□□ -0.93
RAG1-201ENST00000299440 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
RAG1-201ENST00000299440 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
RAG1-201ENST00000299440 AMPHP49418 695 aa9.26□□□□□ -0.93
RAG1-201ENST00000299440 KCNJ4P48050 445 aa9.26□□□□□ -0.93
RAG1-201ENST00000299440 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
RAG1-201ENST00000299440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.24□□□□□ -0.93
RAG1-201ENST00000299440 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
RAG1-201ENST00000299440 PTPRGP23470 1445 aa9.24□□□□□ -0.93
RAG1-201ENST00000299440 NUP155O75694 1391 aa9.24□□□□□ -0.93
RAG1-201ENST00000299440 ATF3P18847 181 aa9.23□□□□□ -0.93
RAG1-201ENST00000299440 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
RAG1-201ENST00000299440 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
RAG1-201ENST00000299440 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
RAG1-201ENST00000299440 FRAT2O75474 233 aaPredicted RBP9.21□□□□□ -0.93
RAG1-201ENST00000299440 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.93
RAG1-201ENST00000299440 NUTM2BA6NNL0 878 aaPredicted RBP9.21□□□□□ -0.94
RAG1-201ENST00000299440 NUTM2EB1AL46 878 aaPredicted RBP9.21□□□□□ -0.94
RAG1-201ENST00000299440 NUTM2AQ8IVF1 878 aaPredicted RBP9.21□□□□□ -0.94
RAG1-201ENST00000299440 APBB1O00213 710 aa9.2□□□□□ -0.94
RAG1-201ENST00000299440 TRAK1Q9UPV9 953 aa9.2□□□□□ -0.94
RAG1-201ENST00000299440 PSME1Q06323 249 aa9.19□□□□□ -0.94
RAG1-201ENST00000299440 GORABQ5T7V8 394 aa9.19□□□□□ -0.94
RAG1-201ENST00000299440 ANKRD30AQ9BXX3 1397 aa9.19□□□□□ -0.94
RAG1-201ENST00000299440 U2AF1L5P0DN76 240 aaPredicted RBP9.19□□□□□ -0.94
RAG1-201ENST00000299440 U2AF1Q01081 240 aaKnown RBP eCLIP9.19□□□□□ -0.94
RAG1-201ENST00000299440 NCLP19338 710 aaKnown RBP9.18□□□□□ -0.94
RAG1-201ENST00000299440 CCDC88BA6NC98 1476 aa9.18□□□□□ -0.94
RAG1-201ENST00000299440 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
RAG1-201ENST00000299440 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
RAG1-201ENST00000299440 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
RAG1-201ENST00000299440 TNIKQ9UKE5 1360 aa9.17□□□□□ -0.94
RAG1-201ENST00000299440 USP35Q9P2H5 1018 aa9.17□□□□□ -0.94
RAG1-201ENST00000299440 ARHGAP35Q9NRY4 1499 aa9.16□□□□□ -0.94
RAG1-201ENST00000299440 FBXW7Q969H0 707 aa9.15□□□□□ -0.94
RAG1-201ENST00000299440 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
RAG1-201ENST00000299440 MROH2BQ7Z745 1585 aa9.15□□□□□ -0.94
RAG1-201ENST00000299440 FHOD3Q2V2M9 1422 aa9.15□□□□□ -0.95
RAG1-201ENST00000299440 NGEFQ8N5V2 710 aa9.15□□□□□ -0.95
RAG1-201ENST00000299440 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
RAG1-201ENST00000299440 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
RAG1-201ENST00000299440 C1orf141Q5JVX7 400 aa9.14□□□□□ -0.95
RAG1-201ENST00000299440 ABCC8Q09428 1581 aa9.13□□□□□ -0.95
RAG1-201ENST00000299440 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
RAG1-201ENST00000299440 PROSER2Q86WR7 435 aaPredicted RBP9.13□□□□□ -0.95
RAG1-201ENST00000299440 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
RAG1-201ENST00000299440 RSPH4AQ5TD94 716 aa9.12□□□□□ -0.95
RAG1-201ENST00000299440 NUTM2GQ5VZR2 741 aa9.12□□□□□ -0.95
RAG1-201ENST00000299440 RGS3P49796 1198 aa9.11□□□□□ -0.95
RAG1-201ENST00000299440 EIF3AQ14152 1382 aaKnown RBP9.11□□□□□ -0.95
RAG1-201ENST00000299440 SLC4A10Q6U841 1118 aa9.11□□□□□ -0.95
RAG1-201ENST00000299440 CWC22Q9HCG8 908 aaKnown RBP9.11□□□□□ -0.95
RAG1-201ENST00000299440 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
RAG1-201ENST00000299440 TTC5Q8N0Z6 440 aa9.1□□□□□ -0.95
RAG1-201ENST00000299440 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
RAG1-201ENST00000299440 RAD21O60216 631 aa9.1□□□□□ -0.95
RAG1-201ENST00000299440 KANK4Q5T7N3 995 aaPredicted RBP9.1□□□□□ -0.95
RAG1-201ENST00000299440 GNL2Q13823 731 aaKnown RBP9.1□□□□□ -0.95
RAG1-201ENST00000299440 STRN4Q9NRL3 753 aa9.1□□□□□ -0.95
RAG1-201ENST00000299440 MS4A1P11836 297 aa9.09□□□□□ -0.95
RAG1-201ENST00000299440 COG3Q96JB2 828 aa9.09□□□□□ -0.95
RAG1-201ENST00000299440 VPS53Q5VIR6 699 aa9.09□□□□□ -0.95
RAG1-201ENST00000299440 CCDC18Q5T9S5 1454 aa9.09□□□□□ -0.95
RAG1-201ENST00000299440 TOMM22Q9NS69 142 aa9.09□□□□□ -0.95
RAG1-201ENST00000299440 ATAD2BQ9ULI0 1458 aa9.09□□□□□ -0.95
RAG1-201ENST00000299440 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
RAG1-201ENST00000299440 CALD1Q05682 793 aaKnown RBP9.08□□□□□ -0.96
RAG1-201ENST00000299440 NLRP2Q9NX02 1062 aa9.08□□□□□ -0.96
RAG1-201ENST00000299440 TEFQ10587 303 aa9.07□□□□□ -0.96
RAG1-201ENST00000299440 RAPGEF2Q9Y4G8 1499 aa9.07□□□□□ -0.96
RAG1-201ENST00000299440 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
RAG1-201ENST00000299440 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.07□□□□□ -0.96
RAG1-201ENST00000299440 TRIM34Q9BYJ4 488 aa9.07□□□□□ -0.96
RAG1-201ENST00000299440 TXNDC2Q86VQ3 553 aa9.07□□□□□ -0.96
RAG1-201ENST00000299440 BECN1Q14457 450 aa9.07□□□□□ -0.96
RAG1-201ENST00000299440 MIER1Q8N108 512 aa9.06□□□□□ -0.96
RAG1-201ENST00000299440 CTDP1Q9Y5B0 961 aaPredicted RBP9.06□□□□□ -0.96
RAG1-201ENST00000299440 GOLGA6L22H0YM25 854 aa9.06□□□□□ -0.96
RAG1-201ENST00000299440 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
RAG1-201ENST00000299440 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
RAG1-201ENST00000299440 HSPA5P11021 654 aaKnown RBP9.05□□□□□ -0.96
RAG1-201ENST00000299440 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
RAG1-201ENST00000299440 KTN1Q86UP2 1357 aaKnown RBP9.04□□□□□ -0.96
RAG1-201ENST00000299440 NBR1Q14596 966 aa9.04□□□□□ -0.96
RAG1-201ENST00000299440 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
RAG1-201ENST00000299440 PRM3Q9NNZ6 103 aa9.04□□□□□ -0.96
RAG1-201ENST00000299440 EIF2S2P20042 333 aaKnown RBP9.04□□□□□ -0.96
RAG1-201ENST00000299440 ITPRIPQ8IWB1 547 aa9.04□□□□□ -0.96
RAG1-201ENST00000299440 KIAA1211Q6ZU35 1233 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms