RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
GABRB3-201ENST00000299267 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
GABRB3-201ENST00000299267 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-201ENST00000299267 FKBP8Q14318 412 aa13.76□□□□□ -0.21
GABRB3-201ENST00000299267 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
GABRB3-201ENST00000299267 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
GABRB3-201ENST00000299267 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
GABRB3-201ENST00000299267 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
GABRB3-201ENST00000299267 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
GABRB3-201ENST00000299267 KNSTRNQ9Y448 316 aa13.73□□□□□ -0.21
GABRB3-201ENST00000299267 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
GABRB3-201ENST00000299267 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
GABRB3-201ENST00000299267 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
GABRB3-201ENST00000299267 LRRC9Q6ZRR7 1453 aa13.71□□□□□ -0.21
GABRB3-201ENST00000299267 SOX12O15370 315 aa13.71□□□□□ -0.21
GABRB3-201ENST00000299267 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
GABRB3-201ENST00000299267 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
GABRB3-201ENST00000299267 NEUROD2Q15784 382 aa13.7□□□□□ -0.22
GABRB3-201ENST00000299267 FGD6Q6ZV73 1430 aa13.69□□□□□ -0.22
GABRB3-201ENST00000299267 CASKIN1Q8WXD9 1431 aa13.69□□□□□ -0.22
GABRB3-201ENST00000299267 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
GABRB3-201ENST00000299267 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
GABRB3-201ENST00000299267 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
GABRB3-201ENST00000299267 A0A0G2JS52 829 aa13.66□□□□□ -0.22
GABRB3-201ENST00000299267 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
GABRB3-201ENST00000299267 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
GABRB3-201ENST00000299267 TMF1P82094 1093 aa13.64□□□□□ -0.23
GABRB3-201ENST00000299267 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
GABRB3-201ENST00000299267 RAPGEF3O95398 923 aa13.63□□□□□ -0.23
GABRB3-201ENST00000299267 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
GABRB3-201ENST00000299267 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
GABRB3-201ENST00000299267 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
GABRB3-201ENST00000299267 KIAA0586Q9BVV6 1533 aa13.61□□□□□ -0.23
GABRB3-201ENST00000299267 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
GABRB3-201ENST00000299267 CDK13Q14004 1512 aaKnown RBP13.61□□□□□ -0.23
GABRB3-201ENST00000299267 ST20-MTHFSA0A0A6YYL1 179 aa13.59□□□□□ -0.23
GABRB3-201ENST00000299267 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
GABRB3-201ENST00000299267 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.23
GABRB3-201ENST00000299267 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-201ENST00000299267 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
GABRB3-201ENST00000299267 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
GABRB3-201ENST00000299267 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
GABRB3-201ENST00000299267 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
GABRB3-201ENST00000299267 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
GABRB3-201ENST00000299267 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
GABRB3-201ENST00000299267 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
GABRB3-201ENST00000299267 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
GABRB3-201ENST00000299267 CFAP53Q96M91 514 aa13.53□□□□□ -0.24
GABRB3-201ENST00000299267 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
GABRB3-201ENST00000299267 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-201ENST00000299267 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.24
GABRB3-201ENST00000299267 IQGAP2Q13576 1575 aa13.52□□□□□ -0.24
GABRB3-201ENST00000299267 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
GABRB3-201ENST00000299267 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
GABRB3-201ENST00000299267 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
GABRB3-201ENST00000299267 UACAQ9BZF9 1416 aa13.51□□□□□ -0.25
GABRB3-201ENST00000299267 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
GABRB3-201ENST00000299267 CCDC136Q96JN2 1154 aa13.51□□□□□ -0.25
GABRB3-201ENST00000299267 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
GABRB3-201ENST00000299267 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
GABRB3-201ENST00000299267 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-201ENST00000299267 RRBP1Q9P2E9 1410 aaKnown RBP13.48□□□□□ -0.25
GABRB3-201ENST00000299267 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
GABRB3-201ENST00000299267 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
GABRB3-201ENST00000299267 TIAM1Q13009 1591 aa13.47□□□□□ -0.25
GABRB3-201ENST00000299267 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
GABRB3-201ENST00000299267 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
GABRB3-201ENST00000299267 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-201ENST00000299267 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.45□□□□□ -0.26
GABRB3-201ENST00000299267 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
GABRB3-201ENST00000299267 MAPK8IP3Q9UPT6 1336 aa13.43□□□□□ -0.26
GABRB3-201ENST00000299267 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-201ENST00000299267 PANK3Q9H999 370 aa13.43□□□□□ -0.26
GABRB3-201ENST00000299267 C9orf84Q5VXU9 1444 aa13.43□□□□□ -0.26
GABRB3-201ENST00000299267 NBPF1Q3BBV0 1214 aa13.42□□□□□ -0.26
GABRB3-201ENST00000299267 ARXQ96QS3 562 aa13.42□□□□□ -0.26
GABRB3-201ENST00000299267 CUL7Q14999 1698 aa13.42□□□□□ -0.26
GABRB3-201ENST00000299267 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
GABRB3-201ENST00000299267 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-201ENST00000299267 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
GABRB3-201ENST00000299267 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-201ENST00000299267 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-201ENST00000299267 USP47Q96K76 1375 aa13.41□□□□□ -0.26
GABRB3-201ENST00000299267 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
GABRB3-201ENST00000299267 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
GABRB3-201ENST00000299267 EHBP1L1Q8N3D4 1523 aa13.39□□□□□ -0.27
GABRB3-201ENST00000299267 NBPF8Q3BBV2 869 aa13.39□□□□□ -0.27
GABRB3-201ENST00000299267 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
GABRB3-201ENST00000299267 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
GABRB3-201ENST00000299267 KTN1Q86UP2 1357 aaKnown RBP13.38□□□□□ -0.27
GABRB3-201ENST00000299267 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
GABRB3-201ENST00000299267 DAPK1P53355 1430 aa13.37□□□□□ -0.27
GABRB3-201ENST00000299267 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
GABRB3-201ENST00000299267 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
GABRB3-201ENST00000299267 MYT1Q01538 1121 aa13.35□□□□□ -0.27
GABRB3-201ENST00000299267 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-201ENST00000299267 NAIPQ13075 1403 aa13.35□□□□□ -0.27
GABRB3-201ENST00000299267 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
GABRB3-201ENST00000299267 HFM1A2PYH4 1435 aa13.34□□□□□ -0.27
GABRB3-201ENST00000299267 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms