RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 CTDP1Q9Y5B0 961 aaPredicted RBP18.22■□□□□ 0.51
SPRED1-201ENST00000299084 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
SPRED1-201ENST00000299084 GOLGA6L1Q8N7Z2 621 aa18.21■□□□□ 0.51
SPRED1-201ENST00000299084 USP35Q9P2H5 1018 aa18.21■□□□□ 0.51
SPRED1-201ENST00000299084 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
SPRED1-201ENST00000299084 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
SPRED1-201ENST00000299084 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
SPRED1-201ENST00000299084 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
SPRED1-201ENST00000299084 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
SPRED1-201ENST00000299084 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
SPRED1-201ENST00000299084 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
SPRED1-201ENST00000299084 MSH5O43196 834 aa18.18■□□□□ 0.5
SPRED1-201ENST00000299084 CREBRFQ8IUR6 639 aa18.17■□□□□ 0.5
SPRED1-201ENST00000299084 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
SPRED1-201ENST00000299084 TRIM34Q9BYJ4 488 aa18.17■□□□□ 0.5
SPRED1-201ENST00000299084 HSCBQ8IWL3 235 aa18.16■□□□□ 0.5
SPRED1-201ENST00000299084 HSP90B1P14625 803 aaKnown RBP18.14■□□□□ 0.49
SPRED1-201ENST00000299084 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
SPRED1-201ENST00000299084 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
SPRED1-201ENST00000299084 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
SPRED1-201ENST00000299084 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
SPRED1-201ENST00000299084 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
SPRED1-201ENST00000299084 KANK1Q14678 1352 aa18.11■□□□□ 0.49
SPRED1-201ENST00000299084 RGS3P49796 1198 aa18.11■□□□□ 0.49
SPRED1-201ENST00000299084 PATL2C9JE40 543 aaKnown RBP18.1■□□□□ 0.49
SPRED1-201ENST00000299084 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
SPRED1-201ENST00000299084 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
SPRED1-201ENST00000299084 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
SPRED1-201ENST00000299084 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
SPRED1-201ENST00000299084 SETQ01105 290 aaPredicted RBP18.06■□□□□ 0.48
SPRED1-201ENST00000299084 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
SPRED1-201ENST00000299084 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
SPRED1-201ENST00000299084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.487e-7■■■■■ 137.6
SPRED1-201ENST00000299084 TPM3P06753 285 aa18.04■□□□□ 0.48
SPRED1-201ENST00000299084 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
SPRED1-201ENST00000299084 PES1O00541 588 aaKnown RBP18.03■□□□□ 0.48
SPRED1-201ENST00000299084 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.48
SPRED1-201ENST00000299084 TOMM22Q9NS69 142 aa18.02■□□□□ 0.48
SPRED1-201ENST00000299084 RAD21O60216 631 aa18.02■□□□□ 0.47
SPRED1-201ENST00000299084 APBB1O00213 710 aa18.01■□□□□ 0.47
SPRED1-201ENST00000299084 AMOTL1Q8IY63 956 aa18.01■□□□□ 0.47
SPRED1-201ENST00000299084 TSR1Q2NL82 804 aaKnown RBP18.01■□□□□ 0.47
SPRED1-201ENST00000299084 TPD52L1Q16890 204 aaPredicted RBP18■□□□□ 0.47
SPRED1-201ENST00000299084 TPM2P07951 284 aa18■□□□□ 0.47
SPRED1-201ENST00000299084 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
SPRED1-201ENST00000299084 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
SPRED1-201ENST00000299084 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
SPRED1-201ENST00000299084 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
SPRED1-201ENST00000299084 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
SPRED1-201ENST00000299084 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
SPRED1-201ENST00000299084 EVA1CP58658 441 aa17.97■□□□□ 0.47
SPRED1-201ENST00000299084 SAFB2Q14151 953 aaKnown RBP eCLIP17.97■□□□□ 0.471e-9■■■■■ 28.8
SPRED1-201ENST00000299084 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPRED1-201ENST00000299084 CALD1Q05682 793 aaKnown RBP17.97■□□□□ 0.47
SPRED1-201ENST00000299084 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
SPRED1-201ENST00000299084 CCDC43Q96MW1 224 aaKnown RBP17.95■□□□□ 0.46
SPRED1-201ENST00000299084 CSPP1Q1MSJ5 1256 aa17.94■□□□□ 0.46
SPRED1-201ENST00000299084 PTMSP20962 102 aa17.94■□□□□ 0.46
SPRED1-201ENST00000299084 AKAP17AQ02040 695 aaKnown RBP17.93■□□□□ 0.46
SPRED1-201ENST00000299084 STK26Q9P289 416 aa17.93■□□□□ 0.46
SPRED1-201ENST00000299084 FBXW7Q969H0 707 aa17.93■□□□□ 0.46
SPRED1-201ENST00000299084 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
SPRED1-201ENST00000299084 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
SPRED1-201ENST00000299084 PAF1Q8N7H5 531 aa17.92■□□□□ 0.46
SPRED1-201ENST00000299084 R3HCC1Q9Y3T6 440 aaKnown RBP17.92■□□□□ 0.46
SPRED1-201ENST00000299084 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
SPRED1-201ENST00000299084 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
SPRED1-201ENST00000299084 WWC2Q6AWC2 1192 aa17.9■□□□□ 0.46
SPRED1-201ENST00000299084 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
SPRED1-201ENST00000299084 TMF1P82094 1093 aa17.89■□□□□ 0.45
SPRED1-201ENST00000299084 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
SPRED1-201ENST00000299084 CCDC70Q6NSX1 233 aa17.89■□□□□ 0.45
SPRED1-201ENST00000299084 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
SPRED1-201ENST00000299084 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
SPRED1-201ENST00000299084 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
SPRED1-201ENST00000299084 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
SPRED1-201ENST00000299084 ODF2Q5BJF6 829 aa17.88■□□□□ 0.45
SPRED1-201ENST00000299084 SF3A1Q15459 793 aaKnown RBP17.87■□□□□ 0.45
SPRED1-201ENST00000299084 PPP4R2Q9NY27 417 aa17.87■□□□□ 0.45
SPRED1-201ENST00000299084 KIF3AQ9Y496 699 aa17.87■□□□□ 0.45
SPRED1-201ENST00000299084 FOXD1Q16676 465 aa17.87■□□□□ 0.45
SPRED1-201ENST00000299084 GBP4Q96PP9 640 aa17.85■□□□□ 0.45
SPRED1-201ENST00000299084 TPM1P09493 284 aa17.85■□□□□ 0.45
SPRED1-201ENST00000299084 VPS37DQ86XT2 251 aa17.83■□□□□ 0.45
SPRED1-201ENST00000299084 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.44
SPRED1-201ENST00000299084 MIER1Q8N108 512 aa17.82■□□□□ 0.44
SPRED1-201ENST00000299084 SYNE3Q6ZMZ3 975 aa17.82■□□□□ 0.44
SPRED1-201ENST00000299084 PCMTD1Q96MG8 357 aaPredicted RBP17.81■□□□□ 0.44
SPRED1-201ENST00000299084 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
SPRED1-201ENST00000299084 DHX16O60231 1041 aaKnown RBP17.8■□□□□ 0.44
SPRED1-201ENST00000299084 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
SPRED1-201ENST00000299084 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
SPRED1-201ENST00000299084 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
SPRED1-201ENST00000299084 CCDC47Q96A33 483 aaKnown RBP17.79■□□□□ 0.44
SPRED1-201ENST00000299084 CCAR2Q8N163 923 aaKnown RBP17.79■□□□□ 0.44
SPRED1-201ENST00000299084 GGT6Q6P531 493 aa17.78■□□□□ 0.44
SPRED1-201ENST00000299084 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
SPRED1-201ENST00000299084 H3BQV1 296 aa17.78■□□□□ 0.44
SPRED1-201ENST00000299084 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
SPRED1-201ENST00000299084 HMMRO75330 724 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms