RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
RPUSD4-201ENST00000298317 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
RPUSD4-201ENST00000298317 KDM6BO15054 1643 aa18.24■□□□□ 0.51
RPUSD4-201ENST00000298317 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
RPUSD4-201ENST00000298317 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
RPUSD4-201ENST00000298317 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
RPUSD4-201ENST00000298317 TEX14Q8IWB6 1497 aa18.22■□□□□ 0.51
RPUSD4-201ENST00000298317 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
RPUSD4-201ENST00000298317 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
RPUSD4-201ENST00000298317 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
RPUSD4-201ENST00000298317 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
RPUSD4-201ENST00000298317 MPHOSPH9Q99550 1183 aa18.19■□□□□ 0.5
RPUSD4-201ENST00000298317 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
RPUSD4-201ENST00000298317 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
RPUSD4-201ENST00000298317 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.17■□□□□ 0.5
RPUSD4-201ENST00000298317 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
RPUSD4-201ENST00000298317 MAGI3Q5TCQ9 1506 aa18.16■□□□□ 0.5
RPUSD4-201ENST00000298317 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
RPUSD4-201ENST00000298317 MIA2Q96PC5 1412 aa18.14■□□□□ 0.5
RPUSD4-201ENST00000298317 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.49
RPUSD4-201ENST00000298317 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
RPUSD4-201ENST00000298317 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
RPUSD4-201ENST00000298317 DNMBPQ6XZF7 1577 aa18.12■□□□□ 0.49
RPUSD4-201ENST00000298317 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
RPUSD4-201ENST00000298317 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
RPUSD4-201ENST00000298317 POLA1P09884 1462 aaPredicted RBP18.1■□□□□ 0.49
RPUSD4-201ENST00000298317 NEFMP07197 916 aa18.09■□□□□ 0.49
RPUSD4-201ENST00000298317 FOXD1Q16676 465 aa18.09■□□□□ 0.49
RPUSD4-201ENST00000298317 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.48
RPUSD4-201ENST00000298317 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
RPUSD4-201ENST00000298317 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
RPUSD4-201ENST00000298317 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
RPUSD4-201ENST00000298317 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
RPUSD4-201ENST00000298317 PDE4AP27815 886 aa18.05■□□□□ 0.48
RPUSD4-201ENST00000298317 NPM2Q86SE8 214 aaKnown RBP18.05■□□□□ 0.48
RPUSD4-201ENST00000298317 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
RPUSD4-201ENST00000298317 MBD5Q9P267 1494 aa18.05■□□□□ 0.48
RPUSD4-201ENST00000298317 PPM1GO15355 546 aaPredicted RBP18.05■□□□□ 0.48
RPUSD4-201ENST00000298317 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
RPUSD4-201ENST00000298317 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
RPUSD4-201ENST00000298317 MS4A1P11836 297 aa18.04■□□□□ 0.48
RPUSD4-201ENST00000298317 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
RPUSD4-201ENST00000298317 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
RPUSD4-201ENST00000298317 ROCK1Q13464 1354 aa18.03■□□□□ 0.48
RPUSD4-201ENST00000298317 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
RPUSD4-201ENST00000298317 EXOC6Q8TAG9 804 aa18■□□□□ 0.47
RPUSD4-201ENST00000298317 USP47Q96K76 1375 aa18■□□□□ 0.47
RPUSD4-201ENST00000298317 KDM5CP41229 1560 aa18■□□□□ 0.47
RPUSD4-201ENST00000298317 KIF14Q15058 1648 aa17.99■□□□□ 0.47
RPUSD4-201ENST00000298317 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-201ENST00000298317 DAPK1P53355 1430 aa17.97■□□□□ 0.47
RPUSD4-201ENST00000298317 NESP48681 1621 aa17.97■□□□□ 0.47
RPUSD4-201ENST00000298317 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
RPUSD4-201ENST00000298317 SLC24A1O60721 1099 aa17.96■□□□□ 0.47
RPUSD4-201ENST00000298317 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.46
RPUSD4-201ENST00000298317 EPRSP07814 1512 aaKnown RBP17.96■□□□□ 0.46
RPUSD4-201ENST00000298317 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
RPUSD4-201ENST00000298317 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
RPUSD4-201ENST00000298317 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
RPUSD4-201ENST00000298317 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
RPUSD4-201ENST00000298317 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
RPUSD4-201ENST00000298317 DDRGK1Q96HY6 314 aa17.93■□□□□ 0.46
RPUSD4-201ENST00000298317 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
RPUSD4-201ENST00000298317 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
RPUSD4-201ENST00000298317 PZPP20742 1482 aa17.93■□□□□ 0.46
RPUSD4-201ENST00000298317 GSE1Q14687 1217 aa17.92■□□□□ 0.46
RPUSD4-201ENST00000298317 ABCC5O15440 1437 aa17.92■□□□□ 0.46
RPUSD4-201ENST00000298317 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
RPUSD4-201ENST00000298317 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
RPUSD4-201ENST00000298317 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
RPUSD4-201ENST00000298317 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
RPUSD4-201ENST00000298317 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
RPUSD4-201ENST00000298317 PDE3BQ13370 1112 aa17.89■□□□□ 0.45
RPUSD4-201ENST00000298317 E9PCH4 1651 aa17.88■□□□□ 0.45
RPUSD4-201ENST00000298317 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
RPUSD4-201ENST00000298317 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
RPUSD4-201ENST00000298317 WDR62O43379 1518 aa17.87■□□□□ 0.45
RPUSD4-201ENST00000298317 RALBP1Q15311 655 aa17.87■□□□□ 0.45
RPUSD4-201ENST00000298317 NFKBIBQ15653 356 aa17.87■□□□□ 0.45
RPUSD4-201ENST00000298317 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
RPUSD4-201ENST00000298317 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
RPUSD4-201ENST00000298317 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
RPUSD4-201ENST00000298317 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
RPUSD4-201ENST00000298317 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
RPUSD4-201ENST00000298317 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
RPUSD4-201ENST00000298317 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
RPUSD4-201ENST00000298317 PARD3Q8TEW0 1356 aa17.78■□□□□ 0.44
RPUSD4-201ENST00000298317 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
RPUSD4-201ENST00000298317 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
RPUSD4-201ENST00000298317 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
RPUSD4-201ENST00000298317 INSRP06213 1382 aa17.78■□□□□ 0.44
RPUSD4-201ENST00000298317 ZMYM4Q5VZL5 1548 aa17.78■□□□□ 0.44
RPUSD4-201ENST00000298317 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
RPUSD4-201ENST00000298317 IQGAP2Q13576 1575 aa17.77■□□□□ 0.44
RPUSD4-201ENST00000298317 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
RPUSD4-201ENST00000298317 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
RPUSD4-201ENST00000298317 CRBNQ96SW2 442 aa17.76■□□□□ 0.43
RPUSD4-201ENST00000298317 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
RPUSD4-201ENST00000298317 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
RPUSD4-201ENST00000298317 CARD11Q9BXL7 1154 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms