RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 ADCY10Q96PN6 1610 aa28.18■■■□□ 2.1
NFIL3-201ENST00000297689 DDX10Q13206 875 aaKnown RBP28.17■■■□□ 2.1
NFIL3-201ENST00000297689 KIF14Q15058 1648 aa28.16■■■□□ 2.1
NFIL3-201ENST00000297689 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
NFIL3-201ENST00000297689 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
NFIL3-201ENST00000297689 ATP10BO94823 1461 aa28.13■■■□□ 2.09
NFIL3-201ENST00000297689 KCNH8Q96L42 1107 aa28.12■■■□□ 2.09
NFIL3-201ENST00000297689 DNMT1P26358 1616 aaKnown RBP28.11■■■□□ 2.09
NFIL3-201ENST00000297689 DAPK1P53355 1430 aa28.11■■■□□ 2.09
NFIL3-201ENST00000297689 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
NFIL3-201ENST00000297689 PTPRGP23470 1445 aa28.09■■■□□ 2.09
NFIL3-201ENST00000297689 ABCC5O15440 1437 aa28.08■■■□□ 2.09
NFIL3-201ENST00000297689 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
NFIL3-201ENST00000297689 GPATCH8Q9UKJ3 1502 aaKnown RBP28.06■■■□□ 2.08
NFIL3-201ENST00000297689 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
NFIL3-201ENST00000297689 HIRIP3Q9BW71 556 aaPredicted RBP28.06■■■□□ 2.08
NFIL3-201ENST00000297689 MPHOSPH9Q99550 1183 aa28.03■■■□□ 2.08
NFIL3-201ENST00000297689 OSCARQ8IYS5 282 aa28.01■■■□□ 2.07
NFIL3-201ENST00000297689 CAMSAP2Q08AD1 1489 aa28■■■□□ 2.07
NFIL3-201ENST00000297689 ABCC10Q5T3U5 1492 aa28■■■□□ 2.07
NFIL3-201ENST00000297689 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
NFIL3-201ENST00000297689 CCER2I3L3R5 266 aa27.99■■■□□ 2.07
NFIL3-201ENST00000297689 TRIM52Q96A61 297 aa27.98■■■□□ 2.07
NFIL3-201ENST00000297689 CDC42BPAQ5VT25 1732 aa27.97■■■□□ 2.07
NFIL3-201ENST00000297689 CFDP1Q9UEE9 299 aaPredicted RBP27.97■■■□□ 2.07
NFIL3-201ENST00000297689 ANKRD30BQ9BXX2 1392 aa27.94■■■□□ 2.06
NFIL3-201ENST00000297689 SUPT16HQ9Y5B9 1047 aaKnown RBP27.9■■■□□ 2.06
NFIL3-201ENST00000297689 CROCC2H7BZ55 1655 aa27.89■■■□□ 2.06
NFIL3-201ENST00000297689 RPRD2Q5VT52 1461 aaKnown RBP27.88■■■□□ 2.05
NFIL3-201ENST00000297689 ANP32CO43423 234 aa27.88■■■□□ 2.05
NFIL3-201ENST00000297689 ADGRL2O95490 1459 aa27.87■■■□□ 2.05
NFIL3-201ENST00000297689 ZNF777Q9ULD5 760 aaPredicted RBP27.87■■■□□ 2.05
NFIL3-201ENST00000297689 NCOA1Q15788 1441 aa27.86■■■□□ 2.05
NFIL3-201ENST00000297689 ADGBQ8N7X0 1667 aa27.86■■■□□ 2.05
NFIL3-201ENST00000297689 L3MBTL2Q969R5 705 aa27.85■■■□□ 2.05
NFIL3-201ENST00000297689 ABCC2Q92887 1545 aa27.84■■■□□ 2.05
NFIL3-201ENST00000297689 TEX14Q8IWB6 1497 aa27.83■■■□□ 2.05
NFIL3-201ENST00000297689 FOXD1Q16676 465 aa27.82■■■□□ 2.04
NFIL3-201ENST00000297689 HSPA5P11021 654 aaKnown RBP27.82■■■□□ 2.04
NFIL3-201ENST00000297689 PZPP20742 1482 aa27.81■■■□□ 2.04
NFIL3-201ENST00000297689 WASHC2AQ641Q2 1341 aa27.78■■■□□ 2.04
NFIL3-201ENST00000297689 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
NFIL3-201ENST00000297689 EIF4G2P78344 907 aaKnown RBP eCLIP27.76■■■□□ 2.03
NFIL3-201ENST00000297689 PREX2Q70Z35 1606 aa27.75■■■□□ 2.03
NFIL3-201ENST00000297689 SLC4A1APQ9BWU0 796 aaKnown RBP27.74■■■□□ 2.03
NFIL3-201ENST00000297689 TTC37Q6PGP7 1564 aa27.72■■■□□ 2.03
NFIL3-201ENST00000297689 NBPF8Q3BBV2 869 aa27.71■■■□□ 2.03
NFIL3-201ENST00000297689 SHANK2Q9UPX8 1470 aa27.71■■■□□ 2.03
NFIL3-201ENST00000297689 SAMD9LQ8IVG5 1584 aa27.71■■■□□ 2.03
NFIL3-201ENST00000297689 UHRF1BP1LA0JNW5 1464 aa27.7■■■□□ 2.03
NFIL3-201ENST00000297689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.7■■■□□ 2.02
NFIL3-201ENST00000297689 ZCCHC11Q5TAX3 1644 aaKnown RBP27.69■■■□□ 2.02
NFIL3-201ENST00000297689 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
NFIL3-201ENST00000297689 SPATA31E1Q6ZUB1 1445 aa27.68■■■□□ 2.02
NFIL3-201ENST00000297689 ANKRD30AQ9BXX3 1397 aa27.68■■■□□ 2.02
NFIL3-201ENST00000297689 MBD5Q9P267 1494 aa27.68■■■□□ 2.02
NFIL3-201ENST00000297689 C9orf84Q5VXU9 1444 aa27.66■■■□□ 2.02
NFIL3-201ENST00000297689 KIAA1107Q9UPP5 1409 aa27.65■■■□□ 2.02
NFIL3-201ENST00000297689 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.022e-7■■□□□ 11.7
NFIL3-201ENST00000297689 CNTLNQ9NXG0 1405 aa27.62■■■□□ 2.01
NFIL3-201ENST00000297689 ANKRD50Q9ULJ7 1429 aa27.62■■■□□ 2.01
NFIL3-201ENST00000297689 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
NFIL3-201ENST00000297689 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
NFIL3-201ENST00000297689 MYO5CQ9NQX4 1742 aa27.6■■■□□ 2.01
NFIL3-201ENST00000297689 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
NFIL3-201ENST00000297689 CCDC141Q6ZP82 1450 aa27.57■■■□□ 2
NFIL3-201ENST00000297689 POLR1AO95602 1720 aaPredicted RBP27.57■■■□□ 2
NFIL3-201ENST00000297689 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
NFIL3-201ENST00000297689 TSPY4P0CV99 314 aa27.55■■■□□ 2
NFIL3-201ENST00000297689 TSPY10P0CW01 314 aa27.55■■■□□ 2
NFIL3-201ENST00000297689 SYCP2Q9BX26 1530 aa27.55■■■□□ 2
NFIL3-201ENST00000297689 PKD2Q13563 968 aa27.53■■■□□ 2
NFIL3-201ENST00000297689 KIF15Q9NS87 1388 aa27.5■■□□□ 1.99
NFIL3-201ENST00000297689 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
NFIL3-201ENST00000297689 RSPH4AQ5TD94 716 aa27.48■■□□□ 1.99
NFIL3-201ENST00000297689 DNAJC5Q9H3Z4 198 aa27.47■■□□□ 1.99
NFIL3-201ENST00000297689 PLCH2O75038 1416 aa27.47■■□□□ 1.99
NFIL3-201ENST00000297689 KIF7Q2M1P5 1343 aa27.46■■□□□ 1.99
NFIL3-201ENST00000297689 UHRF1BP1Q6BDS2 1440 aa27.46■■□□□ 1.99
NFIL3-201ENST00000297689 ARHGEF12Q9NZN5 1544 aa27.45■■□□□ 1.99
NFIL3-201ENST00000297689 NUP155O75694 1391 aa27.45■■□□□ 1.98
NFIL3-201ENST00000297689 PRKRIP1Q9H875 184 aaPredicted RBP27.44■■□□□ 1.98
NFIL3-201ENST00000297689 FKBP8Q14318 412 aa27.44■■□□□ 1.98
NFIL3-201ENST00000297689 PLEKHH2Q8IVE3 1493 aa27.43■■□□□ 1.98
NFIL3-201ENST00000297689 RIMBP3CA6NJZ7 1639 aa27.41■■□□□ 1.98
NFIL3-201ENST00000297689 RIMBP3BA6NNM3 1639 aa27.41■■□□□ 1.98
NFIL3-201ENST00000297689 RIMBP3Q9UFD9 1639 aa27.41■■□□□ 1.98
NFIL3-201ENST00000297689 KDM5CP41229 1560 aa27.38■■□□□ 1.97
NFIL3-201ENST00000297689 CCDC184Q52MB2 194 aa27.37■■□□□ 1.97
NFIL3-201ENST00000297689 PLXNC1O60486 1568 aa27.37■■□□□ 1.97
NFIL3-201ENST00000297689 BCORL1Q5H9F3 1711 aa27.37■■□□□ 1.97
NFIL3-201ENST00000297689 ABCC1P33527 1531 aa27.37■■□□□ 1.97
NFIL3-201ENST00000297689 RALGAPBQ86X10 1494 aa27.35■■□□□ 1.97
NFIL3-201ENST00000297689 WDR7Q9Y4E6 1490 aa27.35■■□□□ 1.97
NFIL3-201ENST00000297689 USP47Q96K76 1375 aa27.35■■□□□ 1.97
NFIL3-201ENST00000297689 HNRNPUQ00839 825 aaKnown RBP eCLIP27.34■■□□□ 1.97
NFIL3-201ENST00000297689 EFCAB2Q5VUJ9 269 aa27.34■■□□□ 1.97
NFIL3-201ENST00000297689 TSHZ2Q9NRE2 1034 aa27.34■■□□□ 1.97
NFIL3-201ENST00000297689 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
NFIL3-201ENST00000297689 ARAP3Q8WWN8 1544 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms