RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 UACAQ9BZF9 1416 aa21.85■■□□□ 1.09
UBAP1-201ENST00000297661 MSH5O43196 834 aa21.84■■□□□ 1.09
UBAP1-201ENST00000297661 NAIPQ13075 1403 aa21.84■■□□□ 1.09
UBAP1-201ENST00000297661 PTPN23Q9H3S7 1636 aa21.83■■□□□ 1.09
UBAP1-201ENST00000297661 ADCY10Q96PN6 1610 aa21.83■■□□□ 1.08
UBAP1-201ENST00000297661 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.08
UBAP1-201ENST00000297661 TRIM52Q96A61 297 aa21.83■■□□□ 1.08
UBAP1-201ENST00000297661 ANP32CO43423 234 aa21.79■■□□□ 1.08
UBAP1-201ENST00000297661 NPM1P06748 294 aaKnown RBP eCLIP21.78■■□□□ 1.08
UBAP1-201ENST00000297661 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
UBAP1-201ENST00000297661 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.08
UBAP1-201ENST00000297661 ABCA8O94911 1581 aa21.77■■□□□ 1.08
UBAP1-201ENST00000297661 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.07
UBAP1-201ENST00000297661 NUP153P49790 1475 aaKnown RBP21.76■■□□□ 1.07
UBAP1-201ENST00000297661 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
UBAP1-201ENST00000297661 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
UBAP1-201ENST00000297661 FOXD1Q16676 465 aa21.74■■□□□ 1.07
UBAP1-201ENST00000297661 ATP10BO94823 1461 aa21.71■■□□□ 1.07
UBAP1-201ENST00000297661 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
UBAP1-201ENST00000297661 KDM6BO15054 1643 aa21.67■■□□□ 1.06
UBAP1-201ENST00000297661 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
UBAP1-201ENST00000297661 FANCIQ9NVI1 1328 aa21.67■■□□□ 1.06
UBAP1-201ENST00000297661 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
UBAP1-201ENST00000297661 PRKCSHP14314 528 aaPredicted RBP21.66■■□□□ 1.06
UBAP1-201ENST00000297661 ERICH6Q7L0X2 663 aa21.65■■□□□ 1.06
UBAP1-201ENST00000297661 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.06
UBAP1-201ENST00000297661 CCER2I3L3R5 266 aa21.64■■□□□ 1.05
UBAP1-201ENST00000297661 KDM5BQ9UGL1 1544 aa21.64■■□□□ 1.05
UBAP1-201ENST00000297661 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
UBAP1-201ENST00000297661 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
UBAP1-201ENST00000297661 ASXL2Q76L83 1435 aa21.62■■□□□ 1.05
UBAP1-201ENST00000297661 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
UBAP1-201ENST00000297661 ZNF644Q9H582 1327 aaPredicted RBP21.62■■□□□ 1.05
UBAP1-201ENST00000297661 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
UBAP1-201ENST00000297661 PLEKHD1A6NEE1 506 aa21.6■■□□□ 1.05
UBAP1-201ENST00000297661 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.04
UBAP1-201ENST00000297661 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
UBAP1-201ENST00000297661 WASHC2AQ641Q2 1341 aa21.57■■□□□ 1.04
UBAP1-201ENST00000297661 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
UBAP1-201ENST00000297661 CDK11AQ9UQ88 783 aaPredicted RBP21.54■■□□□ 1.04
UBAP1-201ENST00000297661 GCC2Q8IWJ2 1684 aa21.52■■□□□ 1.04
UBAP1-201ENST00000297661 HNRNPUQ00839 825 aaKnown RBP eCLIP21.51■■□□□ 1.03
UBAP1-201ENST00000297661 MYT1LQ9UL68 1186 aa21.51■■□□□ 1.03
UBAP1-201ENST00000297661 WDR7Q9Y4E6 1490 aa21.5■■□□□ 1.03
UBAP1-201ENST00000297661 C11orf95C9JLR9 678 aaPredicted RBP21.5■■□□□ 1.03
UBAP1-201ENST00000297661 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.035e-7■■■■■ 27.4
UBAP1-201ENST00000297661 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
UBAP1-201ENST00000297661 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
UBAP1-201ENST00000297661 DEKP35659 375 aaKnown RBP21.47■■□□□ 1.03
UBAP1-201ENST00000297661 IRX6P78412 446 aaPredicted RBP21.47■■□□□ 1.03
UBAP1-201ENST00000297661 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
UBAP1-201ENST00000297661 ZNF777Q9ULD5 760 aaPredicted RBP21.46■■□□□ 1.03
UBAP1-201ENST00000297661 DAPK1P53355 1430 aa21.46■■□□□ 1.03
UBAP1-201ENST00000297661 KIF14Q15058 1648 aa21.46■■□□□ 1.03
UBAP1-201ENST00000297661 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
UBAP1-201ENST00000297661 ABCC5O15440 1437 aa21.45■■□□□ 1.02
UBAP1-201ENST00000297661 CNGB1Q14028 1251 aaPredicted RBP21.44■■□□□ 1.02
UBAP1-201ENST00000297661 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
UBAP1-201ENST00000297661 TROQ12816 1431 aaPredicted RBP21.43■■□□□ 1.02
UBAP1-201ENST00000297661 AKNAQ7Z591 1439 aa21.43■■□□□ 1.02
UBAP1-201ENST00000297661 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
UBAP1-201ENST00000297661 ANKRD30BQ9BXX2 1392 aa21.39■■□□□ 1.02
UBAP1-201ENST00000297661 DIP2BQ9P265 1576 aa21.39■■□□□ 1.01
UBAP1-201ENST00000297661 CFDP1Q9UEE9 299 aaPredicted RBP21.38■■□□□ 1.01
UBAP1-201ENST00000297661 KIF13AQ9H1H9 1805 aa21.37■■□□□ 1.01
UBAP1-201ENST00000297661 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
UBAP1-201ENST00000297661 TTC37Q6PGP7 1564 aa21.37■■□□□ 1.01
UBAP1-201ENST00000297661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.36■■□□□ 1.01
UBAP1-201ENST00000297661 FAM9BQ8IZU0 186 aa21.36■■□□□ 1.01
UBAP1-201ENST00000297661 POLR3GLQ9BT43 218 aa21.34■■□□□ 1.01
UBAP1-201ENST00000297661 ROCK1Q13464 1354 aa21.34■■□□□ 1.01
UBAP1-201ENST00000297661 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
UBAP1-201ENST00000297661 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
UBAP1-201ENST00000297661 CNTLNQ9NXG0 1405 aa21.33■■□□□ 1.01
UBAP1-201ENST00000297661 DNMT1P26358 1616 aaKnown RBP21.33■■□□□ 1.01
UBAP1-201ENST00000297661 RPRD2Q5VT52 1461 aaKnown RBP21.33■■□□□ 1
UBAP1-201ENST00000297661 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
UBAP1-201ENST00000297661 TEX14Q8IWB6 1497 aa21.3■■□□□ 1
UBAP1-201ENST00000297661 NCOA1Q15788 1441 aa21.3■■□□□ 1
UBAP1-201ENST00000297661 MRS2Q9HD23 443 aa21.29■■□□□ 1
UBAP1-201ENST00000297661 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
UBAP1-201ENST00000297661 CAMSAP2Q08AD1 1489 aa21.29■■□□□ 1
UBAP1-201ENST00000297661 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
UBAP1-201ENST00000297661 PPP4R2Q9NY27 417 aa21.26■□□□□ 0.99
UBAP1-201ENST00000297661 PKD2Q13563 968 aa21.25■□□□□ 0.99
UBAP1-201ENST00000297661 ERICH6BQ5W0A0 696 aa21.25■□□□□ 0.99
UBAP1-201ENST00000297661 PZPP20742 1482 aa21.25■□□□□ 0.99
UBAP1-201ENST00000297661 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
UBAP1-201ENST00000297661 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
UBAP1-201ENST00000297661 ANO8Q9HCE9 1232 aaPredicted RBP21.23■□□□□ 0.99
UBAP1-201ENST00000297661 ARHGAP5Q13017 1502 aa21.23■□□□□ 0.99
UBAP1-201ENST00000297661 NBR1Q14596 966 aa21.22■□□□□ 0.99
UBAP1-201ENST00000297661 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
UBAP1-201ENST00000297661 CDC42BPAQ5VT25 1732 aa21.21■□□□□ 0.99
UBAP1-201ENST00000297661 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
UBAP1-201ENST00000297661 RAPGEF3O95398 923 aa21.2■□□□□ 0.98
UBAP1-201ENST00000297661 HNRNPMP52272 730 aaKnown RBP eCLIP21.2■□□□□ 0.983e-7■■■■■ 32.7
UBAP1-201ENST00000297661 SPATA31E1Q6ZUB1 1445 aa21.2■□□□□ 0.98
UBAP1-201ENST00000297661 GLI2P10070 1586 aa21.2■□□□□ 0.98
UBAP1-201ENST00000297661 PLCH2O75038 1416 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms