RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 CPSF1Q10570 1443 aaKnown RBP4.27□□□□□ -1.73
CREBRF-201ENST00000296953 LRRC7Q96NW7 1537 aa4.27□□□□□ -1.73
CREBRF-201ENST00000296953 MIGA1Q8NAN2 632 aa4.27□□□□□ -1.73
CREBRF-201ENST00000296953 ANKRD50Q9ULJ7 1429 aa4.27□□□□□ -1.73
CREBRF-201ENST00000296953 CCDC88BA6NC98 1476 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 CNTLNQ9NXG0 1405 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 DDIT3P35638 169 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 UNC13AQ9UPW8 1703 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 RTL5Q5HYW3 569 aaPredicted RBP4.26□□□□□ -1.73
CREBRF-201ENST00000296953 TOP2AP11388 1531 aaKnown RBP4.26□□□□□ -1.73
CREBRF-201ENST00000296953 MROH2BQ7Z745 1585 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 DHX57Q6P158 1386 aaKnown RBP4.26□□□□□ -1.73
CREBRF-201ENST00000296953 FGD1P98174 961 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 ATP7BP35670 1465 aa4.26□□□□□ -1.73
CREBRF-201ENST00000296953 ATP10AO60312 1499 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 ABCA6Q8N139 1617 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 PTPRTO14522 1441 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 SNAPC4Q5SXM2 1469 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 REREQ9P2R6 1566 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 FSD2A1L4K1 749 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 EIF5BO60841 1220 aaKnown RBP4.25□□□□□ -1.73
CREBRF-201ENST00000296953 PSEN1P49768 467 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 USP35Q9P2H5 1018 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 HECW1Q76N89 1606 aa4.25□□□□□ -1.73
CREBRF-201ENST00000296953 TCOF1Q13428 1488 aaKnown RBP4.25□□□□□ -1.73
CREBRF-201ENST00000296953 KIF1AQ12756 1690 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 NLRP13Q86W25 1043 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 TOP2BQ02880 1626 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 NPC1L1Q9UHC9 1359 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 CHMLP26374 656 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 CSRNP3Q8WYN3 585 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 ASXL1Q8IXJ9 1541 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 CLTCL1P53675 1640 aa4.24□□□□□ -1.73
CREBRF-201ENST00000296953 FANCD2Q9BXW9 1451 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 SLIT3O75094 1523 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 KIF21AQ7Z4S6 1674 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 DIP2AQ14689 1571 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 GTF3C3Q9Y5Q9 886 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 VPS8Q8N3P4 1428 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 DNAJC5Q9H3Z4 198 aa4.23□□□□□ -1.73
CREBRF-201ENST00000296953 CDC42BPAQ5VT25 1732 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 CCER2I3L3R5 266 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 UTP14CQ5TAP6 766 aaKnown RBP4.22□□□□□ -1.73
CREBRF-201ENST00000296953 LAMB4A4D0S4 1761 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 FHOD3Q2V2M9 1422 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 PBRM1Q86U86 1689 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 SLAIN2Q9P270 581 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 SMARCA4P51532 1647 aa4.22□□□□□ -1.73
CREBRF-201ENST00000296953 NCLP19338 710 aaKnown RBP4.22□□□□□ -1.73
CREBRF-201ENST00000296953 SASH1O94885 1247 aa4.21□□□□□ -1.73
CREBRF-201ENST00000296953 CRYBG1Q9Y4K1 1723 aa4.21□□□□□ -1.74
CREBRF-201ENST00000296953 TULP2O00295 520 aa4.21□□□□□ -1.74
CREBRF-201ENST00000296953 CAMSAP2Q08AD1 1489 aa4.21□□□□□ -1.74
CREBRF-201ENST00000296953 CEP162Q5TB80 1403 aa4.21□□□□□ -1.74
CREBRF-201ENST00000296953 CC2D2BQ6DHV5 1058 aa4.21□□□□□ -1.74
CREBRF-201ENST00000296953 POLR3AO14802 1390 aaPredicted RBP4.21□□□□□ -1.74
CREBRF-201ENST00000296953 UHRF1BP1Q6BDS2 1440 aa4.2□□□□□ -1.74
CREBRF-201ENST00000296953 CDK11AQ9UQ88 783 aaPredicted RBP4.2□□□□□ -1.74
CREBRF-201ENST00000296953 CEP152O94986 1710 aa4.2□□□□□ -1.74
CREBRF-201ENST00000296953 AATKQ6ZMQ8 1374 aa4.2□□□□□ -1.74
CREBRF-201ENST00000296953 PPM1GO15355 546 aaPredicted RBP4.2□□□□□ -1.74
CREBRF-201ENST00000296953 PPP1R15AO75807 674 aaPredicted RBP4.2□□□□□ -1.74
CREBRF-201ENST00000296953 SNRNP27Q8WVK2 155 aaKnown RBP4.2□□□□□ -1.74
CREBRF-201ENST00000296953 CLIP1P30622 1438 aa4.2□□□□□ -1.74
CREBRF-201ENST00000296953 MAGI2Q86UL8 1455 aa4.2□□□□□ -1.74
CREBRF-201ENST00000296953 DNAJC5BQ9UF47 199 aa4.19□□□□□ -1.74
CREBRF-201ENST00000296953 ZBED9Q6R2W3 1325 aa4.19□□□□□ -1.74
CREBRF-201ENST00000296953 EFCAB5A4FU69 1503 aa4.19□□□□□ -1.74
CREBRF-201ENST00000296953 CALD1Q05682 793 aaKnown RBP4.19□□□□□ -1.74
CREBRF-201ENST00000296953 FHAD1B1AJZ9 1412 aa4.19□□□□□ -1.74
CREBRF-201ENST00000296953 N4BP2Q86UW6 1770 aaPredicted RBP4.19□□□□□ -1.74
CREBRF-201ENST00000296953 MRC2Q9UBG0 1479 aa4.19□□□□□ -1.74
CREBRF-201ENST00000296953 FAM193AP78312 1265 aa4.18□□□□□ -1.74
CREBRF-201ENST00000296953 KANK1Q14678 1352 aa4.18□□□□□ -1.74
CREBRF-201ENST00000296953 ISY1Q9ULR0 285 aaKnown RBP4.18□□□□□ -1.74
CREBRF-201ENST00000296953 SUPT16HQ9Y5B9 1047 aaKnown RBP4.18□□□□□ -1.74
CREBRF-201ENST00000296953 CUX1P39880 1505 aa4.18□□□□□ -1.74
CREBRF-201ENST00000296953 CACTIN-AS1Q8N1I8 211 aa4.18□□□□□ -1.74
CREBRF-201ENST00000296953 RNF17Q9BXT8 1623 aaKnown RBP4.18□□□□□ -1.74
CREBRF-201ENST00000296953 INO80Q9ULG1 1556 aaPredicted RBP4.18□□□□□ -1.74
CREBRF-201ENST00000296953 UBXN6Q9BZV1 441 aa4.18□□□□□ -1.74
CREBRF-201ENST00000296953 WDR97A6NE52 1622 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 PRDM2Q13029 1718 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 NGEFQ8N5V2 710 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 RGS12O14924 1447 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 MADDQ8WXG6 1647 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 ADGRB2O60241 1585 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 DUOX2Q9NRD8 1548 aa4.17□□□□□ -1.74
CREBRF-201ENST00000296953 KIF16BQ96L93 1317 aa4.16□□□□□ -1.74
CREBRF-201ENST00000296953 NRXN1Q9ULB1 1477 aa4.16□□□□□ -1.74
CREBRF-201ENST00000296953 GTF2F1P35269 517 aaKnown RBP eCLIP4.16□□□□□ -1.74
CREBRF-201ENST00000296953 BCCIPQ9P287 314 aaKnown RBP eCLIP4.16□□□□□ -1.74
CREBRF-201ENST00000296953 EHBP1L1Q8N3D4 1523 aa4.16□□□□□ -1.74
CREBRF-201ENST00000296953 SUPT6HQ7KZ85 1726 aaKnown RBP4.16□□□□□ -1.74
CREBRF-201ENST00000296953 IL27Q8NEV9 243 aa4.16□□□□□ -1.74
CREBRF-201ENST00000296953 SETD1AO15047 1707 aaKnown RBP4.16□□□□□ -1.74
CREBRF-201ENST00000296953 WDR62O43379 1518 aa4.15□□□□□ -1.74
CREBRF-201ENST00000296953 C11orf91Q3C1V1 193 aa4.15□□□□□ -1.74
CREBRF-201ENST00000296953 FAM163AQ96GL9 167 aaPredicted RBP4.15□□□□□ -1.74
CREBRF-201ENST00000296953 NCOA1Q15788 1441 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms