RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 KDM6BO15054 1643 aa18.77■□□□□ 0.6
RUBCN-202ENST00000296343 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.59
RUBCN-202ENST00000296343 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
RUBCN-202ENST00000296343 PTPRGP23470 1445 aa18.73■□□□□ 0.59
RUBCN-202ENST00000296343 RAPGEF6Q8TEU7 1601 aa18.72■□□□□ 0.59
RUBCN-202ENST00000296343 ABCC5O15440 1437 aa18.71■□□□□ 0.59
RUBCN-202ENST00000296343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.581e-7■■■■□ 24.4
RUBCN-202ENST00000296343 DAPK1P53355 1430 aa18.7■□□□□ 0.58
RUBCN-202ENST00000296343 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
RUBCN-202ENST00000296343 NUP160Q12769 1436 aa18.69■□□□□ 0.58
RUBCN-202ENST00000296343 TROQ12816 1431 aaPredicted RBP18.69■□□□□ 0.58
RUBCN-202ENST00000296343 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
RUBCN-202ENST00000296343 KIF14Q15058 1648 aa18.67■□□□□ 0.58
RUBCN-202ENST00000296343 TSPY4P0CV99 314 aa18.66■□□□□ 0.58
RUBCN-202ENST00000296343 TSPY10P0CW01 314 aa18.66■□□□□ 0.58
RUBCN-202ENST00000296343 KDM2AQ9Y2K7 1162 aa18.66■□□□□ 0.58
RUBCN-202ENST00000296343 MIA2Q96PC5 1412 aa18.65■□□□□ 0.58
RUBCN-202ENST00000296343 PKD2Q13563 968 aa18.65■□□□□ 0.58
RUBCN-202ENST00000296343 ATP10BO94823 1461 aa18.64■□□□□ 0.58
RUBCN-202ENST00000296343 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.58
RUBCN-202ENST00000296343 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
RUBCN-202ENST00000296343 CLASP1Q7Z460 1538 aa18.63■□□□□ 0.57
RUBCN-202ENST00000296343 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
RUBCN-202ENST00000296343 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
RUBCN-202ENST00000296343 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
RUBCN-202ENST00000296343 SENP3-EIF4A1A0A087X0R7 540 aa18.61■□□□□ 0.57
RUBCN-202ENST00000296343 NBPF8Q3BBV2 869 aa18.61■□□□□ 0.57
RUBCN-202ENST00000296343 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
RUBCN-202ENST00000296343 ANP32CO43423 234 aa18.6■□□□□ 0.57
RUBCN-202ENST00000296343 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
RUBCN-202ENST00000296343 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
RUBCN-202ENST00000296343 RGL3Q3MIN7 710 aa18.57■□□□□ 0.56
RUBCN-202ENST00000296343 NUP155O75694 1391 aa18.57■□□□□ 0.56
RUBCN-202ENST00000296343 C11orf95C9JLR9 678 aaPredicted RBP18.56■□□□□ 0.56
RUBCN-202ENST00000296343 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
RUBCN-202ENST00000296343 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
RUBCN-202ENST00000296343 BCANQ96GW7 911 aa18.54■□□□□ 0.56
RUBCN-202ENST00000296343 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
RUBCN-202ENST00000296343 ANKRD30AQ9BXX3 1397 aa18.52■□□□□ 0.55
RUBCN-202ENST00000296343 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
RUBCN-202ENST00000296343 AKNAQ7Z591 1439 aa18.51■□□□□ 0.55
RUBCN-202ENST00000296343 ANKRD50Q9ULJ7 1429 aa18.5■□□□□ 0.55
RUBCN-202ENST00000296343 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
RUBCN-202ENST00000296343 C9orf84Q5VXU9 1444 aa18.47■□□□□ 0.55
RUBCN-202ENST00000296343 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 KIF15Q9NS87 1388 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 ROCK1Q13464 1354 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 DNMT1P26358 1616 aaKnown RBP18.46■□□□□ 0.55
RUBCN-202ENST00000296343 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
RUBCN-202ENST00000296343 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
RUBCN-202ENST00000296343 ABCA8O94911 1581 aa18.44■□□□□ 0.54
RUBCN-202ENST00000296343 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
RUBCN-202ENST00000296343 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
RUBCN-202ENST00000296343 FAM9BQ8IZU0 186 aa18.41■□□□□ 0.54
RUBCN-202ENST00000296343 KDM5BQ9UGL1 1544 aa18.41■□□□□ 0.54
RUBCN-202ENST00000296343 PZPP20742 1482 aa18.4■□□□□ 0.54
RUBCN-202ENST00000296343 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
RUBCN-202ENST00000296343 ARHGAP5Q13017 1502 aa18.39■□□□□ 0.54
RUBCN-202ENST00000296343 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
RUBCN-202ENST00000296343 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.53
RUBCN-202ENST00000296343 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
RUBCN-202ENST00000296343 CYB5RLQ6IPT4 315 aa18.36■□□□□ 0.53
RUBCN-202ENST00000296343 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
RUBCN-202ENST00000296343 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
RUBCN-202ENST00000296343 IRX6P78412 446 aaPredicted RBP18.33■□□□□ 0.53
RUBCN-202ENST00000296343 KIAA1107Q9UPP5 1409 aa18.33■□□□□ 0.52
RUBCN-202ENST00000296343 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
RUBCN-202ENST00000296343 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.52
RUBCN-202ENST00000296343 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
RUBCN-202ENST00000296343 ITSN2Q9NZM3 1697 aa18.33■□□□□ 0.52
RUBCN-202ENST00000296343 FKBP8Q14318 412 aa18.32■□□□□ 0.52
RUBCN-202ENST00000296343 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
RUBCN-202ENST00000296343 MBD5Q9P267 1494 aa18.3■□□□□ 0.52
RUBCN-202ENST00000296343 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
RUBCN-202ENST00000296343 ST20-MTHFSA0A0A6YYL1 179 aa18.3■□□□□ 0.52
RUBCN-202ENST00000296343 NBPF1Q3BBV0 1214 aa18.29■□□□□ 0.52
RUBCN-202ENST00000296343 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
RUBCN-202ENST00000296343 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
RUBCN-202ENST00000296343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.27■□□□□ 0.52
RUBCN-202ENST00000296343 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
RUBCN-202ENST00000296343 SAMD9LQ8IVG5 1584 aa18.27■□□□□ 0.51
RUBCN-202ENST00000296343 USP47Q96K76 1375 aa18.27■□□□□ 0.51
RUBCN-202ENST00000296343 CCDC7Q96M83 1385 aa18.27■□□□□ 0.51
RUBCN-202ENST00000296343 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
RUBCN-202ENST00000296343 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
RUBCN-202ENST00000296343 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
RUBCN-202ENST00000296343 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
RUBCN-202ENST00000296343 CCER2I3L3R5 266 aa18.23■□□□□ 0.51
RUBCN-202ENST00000296343 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
RUBCN-202ENST00000296343 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
RUBCN-202ENST00000296343 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
RUBCN-202ENST00000296343 KIF3BO15066 747 aa18.22■□□□□ 0.51
RUBCN-202ENST00000296343 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
RUBCN-202ENST00000296343 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
RUBCN-202ENST00000296343 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
RUBCN-202ENST00000296343 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
RUBCN-202ENST00000296343 RSPH4AQ5TD94 716 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms