RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 DNMT1P26358 1616 aaKnown RBP23.29■■□□□ 1.32
RPN1-201ENST00000296255 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
RPN1-201ENST00000296255 NEFLP07196 543 aa23.26■■□□□ 1.31
RPN1-201ENST00000296255 EIF4G2P78344 907 aaKnown RBP eCLIP23.26■■□□□ 1.31
RPN1-201ENST00000296255 ANKRD30BQ9BXX2 1392 aa23.25■■□□□ 1.31
RPN1-201ENST00000296255 RAPGEF6Q8TEU7 1601 aa23.25■■□□□ 1.31
RPN1-201ENST00000296255 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
RPN1-201ENST00000296255 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
RPN1-201ENST00000296255 C11orf95C9JLR9 678 aaPredicted RBP23.21■■□□□ 1.31
RPN1-201ENST00000296255 TEX14Q8IWB6 1497 aa23.2■■□□□ 1.3
RPN1-201ENST00000296255 CNTLNQ9NXG0 1405 aa23.19■■□□□ 1.3
RPN1-201ENST00000296255 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
RPN1-201ENST00000296255 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
RPN1-201ENST00000296255 NCOA1Q15788 1441 aa23.18■■□□□ 1.3
RPN1-201ENST00000296255 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
RPN1-201ENST00000296255 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
RPN1-201ENST00000296255 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
RPN1-201ENST00000296255 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.3
RPN1-201ENST00000296255 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
RPN1-201ENST00000296255 CCDC184Q52MB2 194 aa23.13■■□□□ 1.29
RPN1-201ENST00000296255 TROQ12816 1431 aaPredicted RBP23.12■■□□□ 1.29
RPN1-201ENST00000296255 CAMSAP2Q08AD1 1489 aa23.12■■□□□ 1.29
RPN1-201ENST00000296255 PZPP20742 1482 aa23.11■■□□□ 1.29
RPN1-201ENST00000296255 SPATA31E1Q6ZUB1 1445 aa23.11■■□□□ 1.29
RPN1-201ENST00000296255 PLB1Q6P1J6 1458 aa23.09■■□□□ 1.29
RPN1-201ENST00000296255 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
RPN1-201ENST00000296255 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
RPN1-201ENST00000296255 KIF14Q15058 1648 aa23.08■■□□□ 1.29
RPN1-201ENST00000296255 ITSN2Q9NZM3 1697 aa23.07■■□□□ 1.28
RPN1-201ENST00000296255 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
RPN1-201ENST00000296255 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
RPN1-201ENST00000296255 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
RPN1-201ENST00000296255 ADCY10Q96PN6 1610 aa23.05■■□□□ 1.28
RPN1-201ENST00000296255 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
RPN1-201ENST00000296255 POLR1AO95602 1720 aaPredicted RBP23.05■■□□□ 1.28
RPN1-201ENST00000296255 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
RPN1-201ENST00000296255 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
RPN1-201ENST00000296255 ADGRL2O95490 1459 aa23.02■■□□□ 1.28
RPN1-201ENST00000296255 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
RPN1-201ENST00000296255 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
RPN1-201ENST00000296255 MBD5Q9P267 1494 aa23■■□□□ 1.27
RPN1-201ENST00000296255 RBM19Q9Y4C8 960 aaKnown RBP23■■□□□ 1.27
RPN1-201ENST00000296255 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
RPN1-201ENST00000296255 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
RPN1-201ENST00000296255 KIAA1107Q9UPP5 1409 aa22.98■■□□□ 1.27
RPN1-201ENST00000296255 MRS2Q9HD23 443 aa22.96■■□□□ 1.27
RPN1-201ENST00000296255 FAM9BQ8IZU0 186 aa22.96■■□□□ 1.27
RPN1-201ENST00000296255 ANP32EQ9BTT0 268 aa22.96■■□□□ 1.27
RPN1-201ENST00000296255 NUP160Q12769 1436 aa22.94■■□□□ 1.26
RPN1-201ENST00000296255 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
RPN1-201ENST00000296255 FBLN2P98095 1184 aa22.94■■□□□ 1.26
RPN1-201ENST00000296255 JPH4Q96JJ6 628 aa22.94■■□□□ 1.26
RPN1-201ENST00000296255 CARMIL2Q6F5E8 1435 aa22.94■■□□□ 1.26
RPN1-201ENST00000296255 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
RPN1-201ENST00000296255 PKD2Q13563 968 aa22.93■■□□□ 1.26
RPN1-201ENST00000296255 CDC42BPAQ5VT25 1732 aa22.92■■□□□ 1.26
RPN1-201ENST00000296255 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
RPN1-201ENST00000296255 ANKRD50Q9ULJ7 1429 aa22.9■■□□□ 1.26
RPN1-201ENST00000296255 ABCA8O94911 1581 aa22.89■■□□□ 1.26
RPN1-201ENST00000296255 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.26
RPN1-201ENST00000296255 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.26
RPN1-201ENST00000296255 DHX29Q7Z478 1369 aaKnown RBP22.88■■□□□ 1.25
RPN1-201ENST00000296255 USP47Q96K76 1375 aa22.88■■□□□ 1.25
RPN1-201ENST00000296255 ATP10BO94823 1461 aa22.86■■□□□ 1.25
RPN1-201ENST00000296255 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
RPN1-201ENST00000296255 KDM5CP41229 1560 aa22.86■■□□□ 1.25
RPN1-201ENST00000296255 SHANK2Q9UPX8 1470 aa22.85■■□□□ 1.25
RPN1-201ENST00000296255 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
RPN1-201ENST00000296255 C9orf84Q5VXU9 1444 aa22.84■■□□□ 1.25
RPN1-201ENST00000296255 ERICH6BQ5W0A0 696 aa22.84■■□□□ 1.25
RPN1-201ENST00000296255 NUP155O75694 1391 aa22.82■■□□□ 1.24
RPN1-201ENST00000296255 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
RPN1-201ENST00000296255 PPP4R2Q9NY27 417 aa22.79■■□□□ 1.24
RPN1-201ENST00000296255 KDM5DQ9BY66 1539 aa22.79■■□□□ 1.24
RPN1-201ENST00000296255 RALGAPBQ86X10 1494 aa22.79■■□□□ 1.24
RPN1-201ENST00000296255 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
RPN1-201ENST00000296255 ARID4BQ4LE39 1312 aaPredicted RBP22.76■■□□□ 1.23
RPN1-201ENST00000296255 ARHGEF12Q9NZN5 1544 aa22.75■■□□□ 1.23
RPN1-201ENST00000296255 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
RPN1-201ENST00000296255 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.23
RPN1-201ENST00000296255 PTPRGP23470 1445 aa22.73■■□□□ 1.23
RPN1-201ENST00000296255 TSPY4P0CV99 314 aa22.73■■□□□ 1.23
RPN1-201ENST00000296255 TSPY10P0CW01 314 aa22.73■■□□□ 1.23
RPN1-201ENST00000296255 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
RPN1-201ENST00000296255 ARHGEF5Q12774 1597 aa22.73■■□□□ 1.23
RPN1-201ENST00000296255 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
RPN1-201ENST00000296255 MSH5O43196 834 aa22.7■■□□□ 1.22
RPN1-201ENST00000296255 SMG6Q86US8 1419 aaKnown RBP22.69■■□□□ 1.22
RPN1-201ENST00000296255 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
RPN1-201ENST00000296255 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
RPN1-201ENST00000296255 ROCK2O75116 1388 aaKnown RBP22.67■■□□□ 1.22
RPN1-201ENST00000296255 B4GALNT3Q6L9W6 998 aa22.67■■□□□ 1.22
RPN1-201ENST00000296255 CDC42BPBQ9Y5S2 1711 aa22.67■■□□□ 1.22
RPN1-201ENST00000296255 FANCIQ9NVI1 1328 aa22.65■■□□□ 1.22
RPN1-201ENST00000296255 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.22
RPN1-201ENST00000296255 DCAF11Q8TEB1 546 aa22.64■■□□□ 1.22
RPN1-201ENST00000296255 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
RPN1-201ENST00000296255 CCDC141Q6ZP82 1450 aa22.64■■□□□ 1.21
RPN1-201ENST00000296255 PNISRQ8TF01 805 aaKnown RBP22.64■■□□□ 1.21
RPN1-201ENST00000296255 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms