RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
SPICE1-201ENST00000295872 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
SPICE1-201ENST00000295872 FOXD1Q16676 465 aa17.39■□□□□ 0.37
SPICE1-201ENST00000295872 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
SPICE1-201ENST00000295872 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
SPICE1-201ENST00000295872 HSPA5P11021 654 aaKnown RBP17.36■□□□□ 0.37
SPICE1-201ENST00000295872 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
SPICE1-201ENST00000295872 HSP90AA1P07900 732 aaKnown RBP17.35■□□□□ 0.37
SPICE1-201ENST00000295872 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
SPICE1-201ENST00000295872 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.37
SPICE1-201ENST00000295872 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
SPICE1-201ENST00000295872 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
SPICE1-201ENST00000295872 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
SPICE1-201ENST00000295872 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
SPICE1-201ENST00000295872 SOX12O15370 315 aa17.29■□□□□ 0.36
SPICE1-201ENST00000295872 ARXQ96QS3 562 aa17.29■□□□□ 0.36
SPICE1-201ENST00000295872 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
SPICE1-201ENST00000295872 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
SPICE1-201ENST00000295872 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
SPICE1-201ENST00000295872 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.35
SPICE1-201ENST00000295872 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
SPICE1-201ENST00000295872 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
SPICE1-201ENST00000295872 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
SPICE1-201ENST00000295872 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
SPICE1-201ENST00000295872 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
SPICE1-201ENST00000295872 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
SPICE1-201ENST00000295872 KIF21BO75037 1637 aa17.23■□□□□ 0.35
SPICE1-201ENST00000295872 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
SPICE1-201ENST00000295872 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
SPICE1-201ENST00000295872 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
SPICE1-201ENST00000295872 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
SPICE1-201ENST00000295872 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
SPICE1-201ENST00000295872 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
SPICE1-201ENST00000295872 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
SPICE1-201ENST00000295872 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
SPICE1-201ENST00000295872 CUX1P39880 1505 aa17.21■□□□□ 0.35
SPICE1-201ENST00000295872 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
SPICE1-201ENST00000295872 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
SPICE1-201ENST00000295872 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
SPICE1-201ENST00000295872 ANP32BQ92688 251 aaKnown RBP17.19■□□□□ 0.34
SPICE1-201ENST00000295872 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
SPICE1-201ENST00000295872 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
SPICE1-201ENST00000295872 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
SPICE1-201ENST00000295872 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
SPICE1-201ENST00000295872 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
SPICE1-201ENST00000295872 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
SPICE1-201ENST00000295872 RALBP1Q15311 655 aa17.16■□□□□ 0.34
SPICE1-201ENST00000295872 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
SPICE1-201ENST00000295872 MS4A1P11836 297 aa17.15■□□□□ 0.34
SPICE1-201ENST00000295872 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
SPICE1-201ENST00000295872 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.34
SPICE1-201ENST00000295872 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
SPICE1-201ENST00000295872 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
SPICE1-201ENST00000295872 NPHP1O15259 732 aa17.13■□□□□ 0.33
SPICE1-201ENST00000295872 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
SPICE1-201ENST00000295872 BECN1Q14457 450 aa17.13■□□□□ 0.33
SPICE1-201ENST00000295872 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
SPICE1-201ENST00000295872 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
SPICE1-201ENST00000295872 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
SPICE1-201ENST00000295872 FGD6Q6ZV73 1430 aa17.11■□□□□ 0.33
SPICE1-201ENST00000295872 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
SPICE1-201ENST00000295872 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
SPICE1-201ENST00000295872 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
SPICE1-201ENST00000295872 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
SPICE1-201ENST00000295872 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
SPICE1-201ENST00000295872 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
SPICE1-201ENST00000295872 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.33
SPICE1-201ENST00000295872 KIF15Q9NS87 1388 aa17.08■□□□□ 0.33
SPICE1-201ENST00000295872 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
SPICE1-201ENST00000295872 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
SPICE1-201ENST00000295872 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
SPICE1-201ENST00000295872 KIAA0586Q9BVV6 1533 aa17.05■□□□□ 0.32
SPICE1-201ENST00000295872 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
SPICE1-201ENST00000295872 NBR1Q14596 966 aa17.05■□□□□ 0.32
SPICE1-201ENST00000295872 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
SPICE1-201ENST00000295872 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPICE1-201ENST00000295872 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
SPICE1-201ENST00000295872 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
SPICE1-201ENST00000295872 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
SPICE1-201ENST00000295872 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
SPICE1-201ENST00000295872 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.31
SPICE1-201ENST00000295872 CASC1Q6TDU7 716 aa17.02■□□□□ 0.31
SPICE1-201ENST00000295872 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
SPICE1-201ENST00000295872 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
SPICE1-201ENST00000295872 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
SPICE1-201ENST00000295872 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
SPICE1-201ENST00000295872 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
SPICE1-201ENST00000295872 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
SPICE1-201ENST00000295872 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
SPICE1-201ENST00000295872 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
SPICE1-201ENST00000295872 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPICE1-201ENST00000295872 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
SPICE1-201ENST00000295872 RGS3P49796 1198 aa16.96■□□□□ 0.31
SPICE1-201ENST00000295872 AMPHP49418 695 aa16.96■□□□□ 0.31
SPICE1-201ENST00000295872 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.3
SPICE1-201ENST00000295872 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.3
SPICE1-201ENST00000295872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPICE1-201ENST00000295872 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
SPICE1-201ENST00000295872 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
SPICE1-201ENST00000295872 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms