RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
CDC42EP3-201ENST00000295324 EIF5BO60841 1220 aaKnown RBP23.11■■□□□ 1.29
CDC42EP3-201ENST00000295324 FOXD1Q16676 465 aa23.1■■□□□ 1.29
CDC42EP3-201ENST00000295324 ANP32BQ92688 251 aaKnown RBP23.09■■□□□ 1.29
CDC42EP3-201ENST00000295324 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
CDC42EP3-201ENST00000295324 IRX6P78412 446 aaPredicted RBP23.06■■□□□ 1.28
CDC42EP3-201ENST00000295324 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
CDC42EP3-201ENST00000295324 RAB3GAP2Q9H2M9 1393 aa23.03■■□□□ 1.28
CDC42EP3-201ENST00000295324 PAK3O75914 559 aaPredicted RBP23.03■■□□□ 1.28
CDC42EP3-201ENST00000295324 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
CDC42EP3-201ENST00000295324 ROCK2O75116 1388 aaKnown RBP23.02■■□□□ 1.27
CDC42EP3-201ENST00000295324 MS4A1P11836 297 aa23■■□□□ 1.27
CDC42EP3-201ENST00000295324 EIF3AQ14152 1382 aaKnown RBP22.99■■□□□ 1.27
CDC42EP3-201ENST00000295324 HSPA5P11021 654 aaKnown RBP22.99■■□□□ 1.27
CDC42EP3-201ENST00000295324 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
CDC42EP3-201ENST00000295324 IGF1RP08069 1367 aa22.97■■□□□ 1.27
CDC42EP3-201ENST00000295324 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.27
CDC42EP3-201ENST00000295324 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
CDC42EP3-201ENST00000295324 FRAT1Q92837 279 aaPredicted RBP22.93■■□□□ 1.26
CDC42EP3-201ENST00000295324 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
CDC42EP3-201ENST00000295324 CASC1Q6TDU7 716 aa22.92■■□□□ 1.26
CDC42EP3-201ENST00000295324 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
CDC42EP3-201ENST00000295324 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.26
CDC42EP3-201ENST00000295324 GLIPR1L2Q4G1C9 344 aa22.9■■□□□ 1.26
CDC42EP3-201ENST00000295324 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
CDC42EP3-201ENST00000295324 RUSC2Q8N2Y8 1516 aa22.89■■□□□ 1.26
CDC42EP3-201ENST00000295324 NGDNQ8NEJ9 315 aaKnown RBP22.88■■□□□ 1.25
CDC42EP3-201ENST00000295324 NUTM2DQ5VT03 806 aaPredicted RBP22.87■■□□□ 1.25
CDC42EP3-201ENST00000295324 OS9Q13438 667 aaPredicted RBP22.87■■□□□ 1.25
CDC42EP3-201ENST00000295324 L3MBTL2Q969R5 705 aa22.84■■□□□ 1.25
CDC42EP3-201ENST00000295324 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
CDC42EP3-201ENST00000295324 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
CDC42EP3-201ENST00000295324 BECN1Q14457 450 aa22.83■■□□□ 1.25
CDC42EP3-201ENST00000295324 CCDC9Q9Y3X0 531 aaKnown RBP22.82■■□□□ 1.24
CDC42EP3-201ENST00000295324 SUPT16HQ9Y5B9 1047 aaKnown RBP22.82■■□□□ 1.24
CDC42EP3-201ENST00000295324 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
CDC42EP3-201ENST00000295324 CALD1Q05682 793 aaKnown RBP22.82■■□□□ 1.24
CDC42EP3-201ENST00000295324 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
CDC42EP3-201ENST00000295324 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
CDC42EP3-201ENST00000295324 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
CDC42EP3-201ENST00000295324 GOLGA2Q08379 1002 aa22.81■■□□□ 1.24
CDC42EP3-201ENST00000295324 CHMP4AQ9BY43 222 aa22.79■■□□□ 1.24
CDC42EP3-201ENST00000295324 RALBP1Q15311 655 aa22.79■■□□□ 1.24
CDC42EP3-201ENST00000295324 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
CDC42EP3-201ENST00000295324 CCER2I3L3R5 266 aa22.77■■□□□ 1.24
CDC42EP3-201ENST00000295324 CFTRP13569 1480 aa22.77■■□□□ 1.24
CDC42EP3-201ENST00000295324 TRAK1Q9UPV9 953 aa22.76■■□□□ 1.23
CDC42EP3-201ENST00000295324 DDRGK1Q96HY6 314 aa22.74■■□□□ 1.23
CDC42EP3-201ENST00000295324 NCLP19338 710 aaKnown RBP22.73■■□□□ 1.23
CDC42EP3-201ENST00000295324 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
CDC42EP3-201ENST00000295324 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
CDC42EP3-201ENST00000295324 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
CDC42EP3-201ENST00000295324 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
CDC42EP3-201ENST00000295324 NUTM2FA1L443 756 aa22.71■■□□□ 1.23
CDC42EP3-201ENST00000295324 AMPHP49418 695 aa22.71■■□□□ 1.23
CDC42EP3-201ENST00000295324 IPO8O15397 1037 aaKnown RBP22.7■■□□□ 1.22
CDC42EP3-201ENST00000295324 CDK11BP21127 795 aaKnown RBP22.69■■□□□ 1.22
CDC42EP3-201ENST00000295324 NESP48681 1621 aa22.68■■□□□ 1.22
CDC42EP3-201ENST00000295324 GOLGA6L22H0YM25 854 aa22.66■■□□□ 1.22
CDC42EP3-201ENST00000295324 PPP4R2Q9NY27 417 aa22.66■■□□□ 1.22
CDC42EP3-201ENST00000295324 ZNF330Q9Y3S2 320 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP3-201ENST00000295324 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.65■■□□□ 1.22
CDC42EP3-201ENST00000295324 RGS3P49796 1198 aa22.65■■□□□ 1.22
CDC42EP3-201ENST00000295324 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
CDC42EP3-201ENST00000295324 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.22
CDC42EP3-201ENST00000295324 KCNJ4P48050 445 aa22.64■■□□□ 1.21
CDC42EP3-201ENST00000295324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDC42EP3-201ENST00000295324 FGD1P98174 961 aa22.62■■□□□ 1.21
CDC42EP3-201ENST00000295324 EVC2Q86UK5 1308 aa22.62■■□□□ 1.21
CDC42EP3-201ENST00000295324 NBR1Q14596 966 aa22.61■■□□□ 1.21
CDC42EP3-201ENST00000295324 STK31Q9BXU1 1019 aa22.6■■□□□ 1.21
CDC42EP3-201ENST00000295324 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
CDC42EP3-201ENST00000295324 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
CDC42EP3-201ENST00000295324 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
CDC42EP3-201ENST00000295324 LTV1Q96GA3 475 aaPredicted RBP22.58■■□□□ 1.21
CDC42EP3-201ENST00000295324 ST20-MTHFSA0A0A6YYL1 179 aa22.57■■□□□ 1.2
CDC42EP3-201ENST00000295324 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
CDC42EP3-201ENST00000295324 TMX4Q9H1E5 349 aaPredicted RBP22.57■■□□□ 1.2
CDC42EP3-201ENST00000295324 ZRSR1Q15695 479 aaKnown RBP22.56■■□□□ 1.2
CDC42EP3-201ENST00000295324 CUX1P39880 1505 aa22.56■■□□□ 1.2
CDC42EP3-201ENST00000295324 STAC3Q96MF2 364 aa22.56■■□□□ 1.2
CDC42EP3-201ENST00000295324 HDAC5Q9UQL6 1122 aa22.56■■□□□ 1.2
CDC42EP3-201ENST00000295324 COG3Q96JB2 828 aa22.55■■□□□ 1.2
CDC42EP3-201ENST00000295324 ANP32EQ9BTT0 268 aa22.55■■□□□ 1.2
CDC42EP3-201ENST00000295324 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
CDC42EP3-201ENST00000295324 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
CDC42EP3-201ENST00000295324 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
CDC42EP3-201ENST00000295324 MINK1Q8N4C8 1332 aaPredicted RBP22.53■■□□□ 1.2
CDC42EP3-201ENST00000295324 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
CDC42EP3-201ENST00000295324 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
CDC42EP3-201ENST00000295324 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
CDC42EP3-201ENST00000295324 CGNL1Q0VF96 1302 aa22.5■■□□□ 1.19
CDC42EP3-201ENST00000295324 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
CDC42EP3-201ENST00000295324 EVA1CP58658 441 aa22.49■■□□□ 1.19
CDC42EP3-201ENST00000295324 PHLDB1Q86UU1 1377 aa22.49■■□□□ 1.19
CDC42EP3-201ENST00000295324 NAP1L2Q9ULW6 460 aaPredicted RBP22.48■■□□□ 1.19
CDC42EP3-201ENST00000295324 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
CDC42EP3-201ENST00000295324 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
CDC42EP3-201ENST00000295324 PANK3Q9H999 370 aa22.47■■□□□ 1.19
CDC42EP3-201ENST00000295324 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms