RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 PDE4AP27815 886 aa18.96■□□□□ 0.63
FUBP1-201ENST00000294623 FAM43AQ8N2R8 423 aa18.95■□□□□ 0.62
FUBP1-201ENST00000294623 RTN4Q9NQC3 1192 aaKnown RBP18.95■□□□□ 0.62
FUBP1-201ENST00000294623 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
FUBP1-201ENST00000294623 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
FUBP1-201ENST00000294623 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
FUBP1-201ENST00000294623 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
FUBP1-201ENST00000294623 CUL7Q14999 1698 aa18.93■□□□□ 0.62
FUBP1-201ENST00000294623 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.92■□□□□ 0.62
FUBP1-201ENST00000294623 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
FUBP1-201ENST00000294623 ROCK2O75116 1388 aaKnown RBP18.91■□□□□ 0.62
FUBP1-201ENST00000294623 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
FUBP1-201ENST00000294623 DENND4BO75064 1496 aaPredicted RBP18.91■□□□□ 0.62
FUBP1-201ENST00000294623 RPRD2Q5VT52 1461 aaKnown RBP18.91■□□□□ 0.62
FUBP1-201ENST00000294623 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
FUBP1-201ENST00000294623 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
FUBP1-201ENST00000294623 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
FUBP1-201ENST00000294623 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
FUBP1-201ENST00000294623 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
FUBP1-201ENST00000294623 GLIPR1L2Q4G1C9 344 aa18.88■□□□□ 0.61
FUBP1-201ENST00000294623 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
FUBP1-201ENST00000294623 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
FUBP1-201ENST00000294623 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
FUBP1-201ENST00000294623 LRPPRCP42704 1394 aaKnown RBP18.86■□□□□ 0.61
FUBP1-201ENST00000294623 INSRP06213 1382 aa18.85■□□□□ 0.61
FUBP1-201ENST00000294623 ZMYM4Q5VZL5 1548 aa18.84■□□□□ 0.61
FUBP1-201ENST00000294623 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
FUBP1-201ENST00000294623 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
FUBP1-201ENST00000294623 BRPF3Q9ULD4 1205 aa18.83■□□□□ 0.6
FUBP1-201ENST00000294623 NPM2Q86SE8 214 aaKnown RBP18.82■□□□□ 0.6
FUBP1-201ENST00000294623 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
FUBP1-201ENST00000294623 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
FUBP1-201ENST00000294623 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
FUBP1-201ENST00000294623 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
FUBP1-201ENST00000294623 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
FUBP1-201ENST00000294623 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
FUBP1-201ENST00000294623 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
FUBP1-201ENST00000294623 KIF14Q15058 1648 aa18.78■□□□□ 0.6
FUBP1-201ENST00000294623 EIF5BO60841 1220 aaKnown RBP18.77■□□□□ 0.6
FUBP1-201ENST00000294623 DAXXQ9UER7 740 aaPredicted RBP18.77■□□□□ 0.6
FUBP1-201ENST00000294623 ROCK1Q13464 1354 aa18.77■□□□□ 0.59
FUBP1-201ENST00000294623 MPHOSPH9Q99550 1183 aa18.77■□□□□ 0.59
FUBP1-201ENST00000294623 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
FUBP1-201ENST00000294623 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
FUBP1-201ENST00000294623 RCAN3Q9UKA8 241 aa18.76■□□□□ 0.59
FUBP1-201ENST00000294623 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
FUBP1-201ENST00000294623 PKNOX2Q96KN3 472 aa18.73■□□□□ 0.59
FUBP1-201ENST00000294623 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
FUBP1-201ENST00000294623 PLEKHH2Q8IVE3 1493 aa18.73■□□□□ 0.59
FUBP1-201ENST00000294623 ABCA10Q8WWZ4 1543 aa18.73■□□□□ 0.59
FUBP1-201ENST00000294623 EXOC6Q8TAG9 804 aa18.73■□□□□ 0.59
FUBP1-201ENST00000294623 KDM5CP41229 1560 aa18.72■□□□□ 0.59
FUBP1-201ENST00000294623 RALBP1Q15311 655 aa18.72■□□□□ 0.59
FUBP1-201ENST00000294623 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
FUBP1-201ENST00000294623 BCORL1Q5H9F3 1711 aa18.7■□□□□ 0.58
FUBP1-201ENST00000294623 KDM6BO15054 1643 aa18.7■□□□□ 0.58
FUBP1-201ENST00000294623 MYBBP1AQ9BQG0 1328 aaKnown RBP18.69■□□□□ 0.58
FUBP1-201ENST00000294623 NBPF8Q3BBV2 869 aa18.69■□□□□ 0.58
FUBP1-201ENST00000294623 L1TD1Q5T7N2 865 aaKnown RBP18.69■□□□□ 0.58
FUBP1-201ENST00000294623 E9PCH4 1651 aa18.69■□□□□ 0.58
FUBP1-201ENST00000294623 USP47Q96K76 1375 aa18.66■□□□□ 0.58
FUBP1-201ENST00000294623 P3H3Q8IVL6 736 aa18.65■□□□□ 0.58
FUBP1-201ENST00000294623 UHRF1BP1Q6BDS2 1440 aa18.64■□□□□ 0.57
FUBP1-201ENST00000294623 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
FUBP1-201ENST00000294623 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
FUBP1-201ENST00000294623 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
FUBP1-201ENST00000294623 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
FUBP1-201ENST00000294623 CENPQQ7L2Z9 268 aaPredicted RBP18.62■□□□□ 0.57
FUBP1-201ENST00000294623 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
FUBP1-201ENST00000294623 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
FUBP1-201ENST00000294623 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
FUBP1-201ENST00000294623 ARHGEF12Q9NZN5 1544 aa18.6■□□□□ 0.57
FUBP1-201ENST00000294623 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
FUBP1-201ENST00000294623 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
FUBP1-201ENST00000294623 RRP9O43818 475 aaKnown RBP18.58■□□□□ 0.56
FUBP1-201ENST00000294623 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
FUBP1-201ENST00000294623 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
FUBP1-201ENST00000294623 NLRP13Q86W25 1043 aa18.55■□□□□ 0.56
FUBP1-201ENST00000294623 DAPK1P53355 1430 aa18.54■□□□□ 0.56
FUBP1-201ENST00000294623 NESP48681 1621 aa18.54■□□□□ 0.56
FUBP1-201ENST00000294623 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
FUBP1-201ENST00000294623 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.55
FUBP1-201ENST00000294623 KIAA1107Q9UPP5 1409 aa18.51■□□□□ 0.55
FUBP1-201ENST00000294623 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
FUBP1-201ENST00000294623 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
FUBP1-201ENST00000294623 EIF3AQ14152 1382 aaKnown RBP18.5■□□□□ 0.55
FUBP1-201ENST00000294623 PZPP20742 1482 aa18.5■□□□□ 0.55
FUBP1-201ENST00000294623 C8orf34Q49A92 452 aa18.5■□□□□ 0.55
FUBP1-201ENST00000294623 DCAF11Q8TEB1 546 aa18.5■□□□□ 0.55
FUBP1-201ENST00000294623 BECN1Q14457 450 aa18.49■□□□□ 0.55
FUBP1-201ENST00000294623 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
FUBP1-201ENST00000294623 CLCN1P35523 988 aa18.48■□□□□ 0.55
FUBP1-201ENST00000294623 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
FUBP1-201ENST00000294623 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
FUBP1-201ENST00000294623 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
FUBP1-201ENST00000294623 EPRSP07814 1512 aaKnown RBP18.46■□□□□ 0.55
FUBP1-201ENST00000294623 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
FUBP1-201ENST00000294623 ZMYM3Q14202 1370 aa18.45■□□□□ 0.54
FUBP1-201ENST00000294623 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
FUBP1-201ENST00000294623 ABCC5O15440 1437 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms