RNA–Protein interactions for RNA: ENST00000292174.4

CXCR5-201, Transcript of C-X-C motif chemokine receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCR5, Length 4,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5-201ENST00000292174 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
CXCR5-201ENST00000292174 GRIN2AQ12879 1464 aa17.77■□□□□ 0.43
CXCR5-201ENST00000292174 HECW1Q76N89 1606 aa17.77■□□□□ 0.43
CXCR5-201ENST00000292174 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
CXCR5-201ENST00000292174 EHBP1L1Q8N3D4 1523 aa17.76■□□□□ 0.43
CXCR5-201ENST00000292174 DEKP35659 375 aaKnown RBP17.74■□□□□ 0.43
CXCR5-201ENST00000292174 GGT6Q6P531 493 aa17.74■□□□□ 0.43
CXCR5-201ENST00000292174 MIER1Q8N108 512 aa17.74■□□□□ 0.43
CXCR5-201ENST00000292174 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
CXCR5-201ENST00000292174 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
CXCR5-201ENST00000292174 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
CXCR5-201ENST00000292174 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
CXCR5-201ENST00000292174 KIF3BO15066 747 aa17.72■□□□□ 0.43
CXCR5-201ENST00000292174 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
CXCR5-201ENST00000292174 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
CXCR5-201ENST00000292174 MAP3K1Q13233 1512 aa17.71■□□□□ 0.43
CXCR5-201ENST00000292174 TIAM1Q13009 1591 aa17.7■□□□□ 0.42
CXCR5-201ENST00000292174 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
CXCR5-201ENST00000292174 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
CXCR5-201ENST00000292174 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
CXCR5-201ENST00000292174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.67■□□□□ 0.42
CXCR5-201ENST00000292174 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
CXCR5-201ENST00000292174 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
CXCR5-201ENST00000292174 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
CXCR5-201ENST00000292174 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
CXCR5-201ENST00000292174 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
CXCR5-201ENST00000292174 UACAQ9BZF9 1416 aa17.65■□□□□ 0.42
CXCR5-201ENST00000292174 TMF1P82094 1093 aa17.65■□□□□ 0.42
CXCR5-201ENST00000292174 NBR1Q14596 966 aa17.64■□□□□ 0.41
CXCR5-201ENST00000292174 KNSTRNQ9Y448 316 aa17.64■□□□□ 0.41
CXCR5-201ENST00000292174 FAM9BQ8IZU0 186 aa17.64■□□□□ 0.41
CXCR5-201ENST00000292174 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
CXCR5-201ENST00000292174 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
CXCR5-201ENST00000292174 POGKQ9P215 609 aa17.61■□□□□ 0.41
CXCR5-201ENST00000292174 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
CXCR5-201ENST00000292174 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
CXCR5-201ENST00000292174 MLECQ14165 292 aa17.6■□□□□ 0.41
CXCR5-201ENST00000292174 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
CXCR5-201ENST00000292174 FOXD1Q16676 465 aa17.58■□□□□ 0.41
CXCR5-201ENST00000292174 STAC3Q96MF2 364 aa17.58■□□□□ 0.4
CXCR5-201ENST00000292174 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
CXCR5-201ENST00000292174 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
CXCR5-201ENST00000292174 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
CXCR5-201ENST00000292174 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
CXCR5-201ENST00000292174 WDR62O43379 1518 aa17.57■□□□□ 0.4
CXCR5-201ENST00000292174 L3MBTL2Q969R5 705 aa17.56■□□□□ 0.4
CXCR5-201ENST00000292174 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
CXCR5-201ENST00000292174 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
CXCR5-201ENST00000292174 FAM69CQ0P6D2 419 aa17.54■□□□□ 0.4
CXCR5-201ENST00000292174 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
CXCR5-201ENST00000292174 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
CXCR5-201ENST00000292174 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
CXCR5-201ENST00000292174 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
CXCR5-201ENST00000292174 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
CXCR5-201ENST00000292174 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
CXCR5-201ENST00000292174 C14orf37Q86TY3 774 aa17.52■□□□□ 0.39
CXCR5-201ENST00000292174 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
CXCR5-201ENST00000292174 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
CXCR5-201ENST00000292174 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
CXCR5-201ENST00000292174 KIF21AQ7Z4S6 1674 aa17.5■□□□□ 0.39
CXCR5-201ENST00000292174 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
CXCR5-201ENST00000292174 ADAMTS12P58397 1594 aa17.48■□□□□ 0.39
CXCR5-201ENST00000292174 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
CXCR5-201ENST00000292174 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
CXCR5-201ENST00000292174 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
CXCR5-201ENST00000292174 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.38
CXCR5-201ENST00000292174 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
CXCR5-201ENST00000292174 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
CXCR5-201ENST00000292174 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
CXCR5-201ENST00000292174 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
CXCR5-201ENST00000292174 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
CXCR5-201ENST00000292174 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
CXCR5-201ENST00000292174 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
CXCR5-201ENST00000292174 VGFO15240 615 aaPredicted RBP17.43■□□□□ 0.38
CXCR5-201ENST00000292174 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
CXCR5-201ENST00000292174 DAPK1P53355 1430 aa17.42■□□□□ 0.38
CXCR5-201ENST00000292174 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
CXCR5-201ENST00000292174 CTTNBP2Q8WZ74 1663 aa17.4■□□□□ 0.38
CXCR5-201ENST00000292174 KIF14Q15058 1648 aa17.4■□□□□ 0.38
CXCR5-201ENST00000292174 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
CXCR5-201ENST00000292174 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
CXCR5-201ENST00000292174 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
CXCR5-201ENST00000292174 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
CXCR5-201ENST00000292174 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
CXCR5-201ENST00000292174 EIF4G3O43432 1585 aaKnown RBP17.38■□□□□ 0.37
CXCR5-201ENST00000292174 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
CXCR5-201ENST00000292174 RALBP1Q15311 655 aa17.37■□□□□ 0.37
CXCR5-201ENST00000292174 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
CXCR5-201ENST00000292174 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
CXCR5-201ENST00000292174 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
CXCR5-201ENST00000292174 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
CXCR5-201ENST00000292174 NUP160Q12769 1436 aa17.35■□□□□ 0.37
CXCR5-201ENST00000292174 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.37
CXCR5-201ENST00000292174 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.36
CXCR5-201ENST00000292174 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
CXCR5-201ENST00000292174 KIAA1107Q9UPP5 1409 aa17.31■□□□□ 0.36
CXCR5-201ENST00000292174 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
CXCR5-201ENST00000292174 STK26Q9P289 416 aa17.31■□□□□ 0.36
CXCR5-201ENST00000292174 PTPN23Q9H3S7 1636 aa17.31■□□□□ 0.36
CXCR5-201ENST00000292174 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms