RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 JPH4Q96JJ6 628 aa6.31□□□□□ -1.4
UBR1-201ENST00000290650 A0A0G2JS52 829 aa6.31□□□□□ -1.4
UBR1-201ENST00000290650 EIF5BO60841 1220 aaKnown RBP6.3□□□□□ -1.4
UBR1-201ENST00000290650 SPRYD3Q8NCJ5 442 aa6.3□□□□□ -1.4
UBR1-201ENST00000290650 PPP4R2Q9NY27 417 aa6.3□□□□□ -1.4
UBR1-201ENST00000290650 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
UBR1-201ENST00000290650 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.3□□□□□ -1.4
UBR1-201ENST00000290650 PLIN1O60240 522 aa6.29□□□□□ -1.4
UBR1-201ENST00000290650 GAPVD1Q14C86 1478 aa6.29□□□□□ -1.4
UBR1-201ENST00000290650 CC2D2AQ9P2K1 1620 aa6.29□□□□□ -1.4
UBR1-201ENST00000290650 BICRAQ9NZM4 1560 aa6.29□□□□□ -1.4
UBR1-201ENST00000290650 POGKQ9P215 609 aa6.29□□□□□ -1.4
UBR1-201ENST00000290650 LRRC9Q6ZRR7 1453 aa6.28□□□□□ -1.4
UBR1-201ENST00000290650 NUTM2FA1L443 756 aa6.28□□□□□ -1.4
UBR1-201ENST00000290650 KIF3BO15066 747 aa6.28□□□□□ -1.4
UBR1-201ENST00000290650 TMF1P82094 1093 aa6.28□□□□□ -1.4
UBR1-201ENST00000290650 SRPK2P78362 688 aaKnown RBP6.28□□□□□ -1.4
UBR1-201ENST00000290650 CCER2I3L3R5 266 aa6.27□□□□□ -1.41
UBR1-201ENST00000290650 LMOD2Q6P5Q4 547 aa6.27□□□□□ -1.41
UBR1-201ENST00000290650 TOP2BQ02880 1626 aa6.27□□□□□ -1.41
UBR1-201ENST00000290650 UPF2Q9HAU5 1272 aaKnown RBP6.27□□□□□ -1.41
UBR1-201ENST00000290650 RRP7AQ9Y3A4 280 aaKnown RBP6.27□□□□□ -1.41
UBR1-201ENST00000290650 CFTRP13569 1480 aa6.26□□□□□ -1.41
UBR1-201ENST00000290650 FTSJ3Q8IY81 847 aaKnown RBP6.26□□□□□ -1.41
UBR1-201ENST00000290650 WDR97A6NE52 1622 aa6.26□□□□□ -1.41
UBR1-201ENST00000290650 CARMIL2Q6F5E8 1435 aa6.26□□□□□ -1.41
UBR1-201ENST00000290650 FGD6Q6ZV73 1430 aa6.25□□□□□ -1.41
UBR1-201ENST00000290650 CCDC184Q52MB2 194 aa6.25□□□□□ -1.41
UBR1-201ENST00000290650 TRAK1Q9UPV9 953 aa6.25□□□□□ -1.41
UBR1-201ENST00000290650 ANKRD30AQ9BXX3 1397 aa6.25□□□□□ -1.41
UBR1-201ENST00000290650 APBB1O00213 710 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 MORC1Q86VD1 984 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 TAOK2Q9UL54 1235 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 PANK3Q9H999 370 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 CLUAP1Q96AJ1 413 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 BCL2L13Q9BXK5 485 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 RCAN3Q9UKA8 241 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 NOP58Q9Y2X3 529 aaKnown RBP6.24□□□□□ -1.41
UBR1-201ENST00000290650 NCOA2Q15596 1464 aa6.24□□□□□ -1.41
UBR1-201ENST00000290650 WASHC2AQ641Q2 1341 aa6.23□□□□□ -1.41
UBR1-201ENST00000290650 KTN1Q86UP2 1357 aaKnown RBP6.23□□□□□ -1.41
UBR1-201ENST00000290650 NCAPD3P42695 1498 aa6.23□□□□□ -1.41
UBR1-201ENST00000290650 PRKRIP1Q9H875 184 aaPredicted RBP6.23□□□□□ -1.41
UBR1-201ENST00000290650 CFAP53Q96M91 514 aa6.23□□□□□ -1.41
UBR1-201ENST00000290650 USP47Q96K76 1375 aa6.23□□□□□ -1.41
UBR1-201ENST00000290650 TIMELESSQ9UNS1 1208 aa6.23□□□□□ -1.41
UBR1-201ENST00000290650 TRHP20396 242 aaPredicted RBP6.22□□□□□ -1.41
UBR1-201ENST00000290650 MAPK8IP3Q9UPT6 1336 aa6.22□□□□□ -1.41
UBR1-201ENST00000290650 CDK13Q14004 1512 aaKnown RBP6.22□□□□□ -1.41
UBR1-201ENST00000290650 SLC4A3P48751 1232 aa6.22□□□□□ -1.41
UBR1-201ENST00000290650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.22□□□□□ -1.41
UBR1-201ENST00000290650 POLA1P09884 1462 aaPredicted RBP6.22□□□□□ -1.41
UBR1-201ENST00000290650 PCF11O94913 1555 aaKnown RBP6.22□□□□□ -1.41
UBR1-201ENST00000290650 PRXQ9BXM0 1461 aa6.22□□□□□ -1.41
UBR1-201ENST00000290650 CDCA8Q53HL2 280 aa6.22□□□□□ -1.41
UBR1-201ENST00000290650 U2AF1L5P0DN76 240 aaPredicted RBP6.21□□□□□ -1.41
UBR1-201ENST00000290650 U2AF1Q01081 240 aaKnown RBP eCLIP6.21□□□□□ -1.41
UBR1-201ENST00000290650 SPAG9O60271 1321 aaKnown RBP6.21□□□□□ -1.41
UBR1-201ENST00000290650 KANK1Q14678 1352 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 MYOM3Q5VTT5 1437 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 NBPF8Q3BBV2 869 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 EFCAB2Q5VUJ9 269 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 TOPBP1Q92547 1522 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 KIF7Q2M1P5 1343 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 EXOC6Q8TAG9 804 aa6.21□□□□□ -1.42
UBR1-201ENST00000290650 TIAM1Q13009 1591 aa6.2□□□□□ -1.42
UBR1-201ENST00000290650 ERICH3Q5RHP9 1530 aa6.2□□□□□ -1.42
UBR1-201ENST00000290650 MYH16Q9H6N6 1097 aa6.2□□□□□ -1.42
UBR1-201ENST00000290650 NUDCQ9Y266 331 aa6.2□□□□□ -1.42
UBR1-201ENST00000290650 NCLP19338 710 aaKnown RBP6.19□□□□□ -1.42
UBR1-201ENST00000290650 NBPF1Q3BBV0 1214 aa6.19□□□□□ -1.42
UBR1-201ENST00000290650 CYB5RLQ6IPT4 315 aa6.19□□□□□ -1.42
UBR1-201ENST00000290650 RRBP1Q9P2E9 1410 aaKnown RBP6.19□□□□□ -1.42
UBR1-201ENST00000290650 PTPRGP23470 1445 aa6.19□□□□□ -1.42
UBR1-201ENST00000290650 PRG4Q92954 1404 aaPredicted RBP6.19□□□□□ -1.42
UBR1-201ENST00000290650 CCDC144AA2RUR9 1427 aa6.19□□□□□ -1.42
UBR1-201ENST00000290650 WASHC2CQ9Y4E1 1318 aa6.19□□□□□ -1.42
UBR1-201ENST00000290650 ELL2O00472 640 aaPredicted RBP6.19□□□□□ -1.42
UBR1-201ENST00000290650 TCERG1O14776 1098 aaKnown RBP6.19□□□□□ -1.42
UBR1-201ENST00000290650 CASKIN1Q8WXD9 1431 aa6.19□□□□□ -1.42
UBR1-201ENST00000290650 PAK3O75914 559 aaPredicted RBP6.19□□□□□ -1.42
UBR1-201ENST00000290650 AFAP1Q8N556 730 aa6.18□□□□□ -1.42
UBR1-201ENST00000290650 DEKP35659 375 aaKnown RBP6.18□□□□□ -1.42
UBR1-201ENST00000290650 TMEM132EQ6IEE7 984 aa6.18□□□□□ -1.42
UBR1-201ENST00000290650 SLKQ9H2G2 1235 aaPredicted RBP6.18□□□□□ -1.42
UBR1-201ENST00000290650 C11orf95C9JLR9 678 aaPredicted RBP6.18□□□□□ -1.42
UBR1-201ENST00000290650 CDCA7LQ96GN5 454 aa6.18□□□□□ -1.42
UBR1-201ENST00000290650 UACAQ9BZF9 1416 aa6.18□□□□□ -1.42
UBR1-201ENST00000290650 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
UBR1-201ENST00000290650 CRBNQ96SW2 442 aa6.17□□□□□ -1.42
UBR1-201ENST00000290650 CCDC7Q96M83 1385 aa6.17□□□□□ -1.42
UBR1-201ENST00000290650 ITPRIPQ8IWB1 547 aa6.17□□□□□ -1.42
UBR1-201ENST00000290650 KIF15Q9NS87 1388 aa6.17□□□□□ -1.42
UBR1-201ENST00000290650 RALBP1Q15311 655 aa6.17□□□□□ -1.42
UBR1-201ENST00000290650 SKAP1Q86WV1 359 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 FOXD4L1Q9NU39 408 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 MINK1Q8N4C8 1332 aaPredicted RBP6.16□□□□□ -1.42
UBR1-201ENST00000290650 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
UBR1-201ENST00000290650 FYCO1Q9BQS8 1478 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 LTV1Q96GA3 475 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms