RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 KDM2AQ9Y2K7 1162 aa18.82■□□□□ 0.6
SEC16A-202ENST00000290037 CSPP1Q1MSJ5 1256 aa18.82■□□□□ 0.6
SEC16A-202ENST00000290037 LMOD3Q0VAK6 560 aa18.81■□□□□ 0.6
SEC16A-202ENST00000290037 GBP4Q96PP9 640 aa18.8■□□□□ 0.6
SEC16A-202ENST00000290037 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
SEC16A-202ENST00000290037 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
SEC16A-202ENST00000290037 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
SEC16A-202ENST00000290037 KIF15Q9NS87 1388 aa18.77■□□□□ 0.6
SEC16A-202ENST00000290037 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
SEC16A-202ENST00000290037 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
SEC16A-202ENST00000290037 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
SEC16A-202ENST00000290037 POGKQ9P215 609 aa18.75■□□□□ 0.59
SEC16A-202ENST00000290037 PHF14O94880 888 aa18.74■□□□□ 0.59
SEC16A-202ENST00000290037 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
SEC16A-202ENST00000290037 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
SEC16A-202ENST00000290037 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
SEC16A-202ENST00000290037 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
SEC16A-202ENST00000290037 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
SEC16A-202ENST00000290037 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
SEC16A-202ENST00000290037 MIA2Q96PC5 1412 aa18.72■□□□□ 0.59
SEC16A-202ENST00000290037 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
SEC16A-202ENST00000290037 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
SEC16A-202ENST00000290037 GPATCH3Q96I76 525 aa18.7■□□□□ 0.58
SEC16A-202ENST00000290037 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
SEC16A-202ENST00000290037 CUL7Q14999 1698 aa18.69■□□□□ 0.58
SEC16A-202ENST00000290037 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
SEC16A-202ENST00000290037 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
SEC16A-202ENST00000290037 HMMRO75330 724 aa18.68■□□□□ 0.58
SEC16A-202ENST00000290037 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
SEC16A-202ENST00000290037 PLEKHH2Q8IVE3 1493 aa18.66■□□□□ 0.58
SEC16A-202ENST00000290037 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
SEC16A-202ENST00000290037 NBR1Q14596 966 aa18.65■□□□□ 0.58
SEC16A-202ENST00000290037 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
SEC16A-202ENST00000290037 GOLGA6L4A6NEF3 574 aa18.65■□□□□ 0.58
SEC16A-202ENST00000290037 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
SEC16A-202ENST00000290037 ROCK1Q13464 1354 aa18.64■□□□□ 0.57
SEC16A-202ENST00000290037 SUPT16HQ9Y5B9 1047 aaKnown RBP18.63■□□□□ 0.57
SEC16A-202ENST00000290037 CCDC144AA2RUR9 1427 aa18.63■□□□□ 0.57
SEC16A-202ENST00000290037 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
SEC16A-202ENST00000290037 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
SEC16A-202ENST00000290037 TPM4P67936 248 aa18.62■□□□□ 0.57
SEC16A-202ENST00000290037 MORC1Q86VD1 984 aa18.61■□□□□ 0.57
SEC16A-202ENST00000290037 DNTTIP2Q5QJE6 756 aaKnown RBP18.61■□□□□ 0.57
SEC16A-202ENST00000290037 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
SEC16A-202ENST00000290037 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
SEC16A-202ENST00000290037 NUP155O75694 1391 aa18.59■□□□□ 0.57
SEC16A-202ENST00000290037 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
SEC16A-202ENST00000290037 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
SEC16A-202ENST00000290037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.574e-6■□□□□ 10.3
SEC16A-202ENST00000290037 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
SEC16A-202ENST00000290037 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.57
SEC16A-202ENST00000290037 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.57
SEC16A-202ENST00000290037 SKOR2Q2VWA4 1001 aaPredicted RBP18.58■□□□□ 0.57
SEC16A-202ENST00000290037 ATP6V1DQ9Y5K8 247 aa18.58■□□□□ 0.56
SEC16A-202ENST00000290037 WASHC2AQ641Q2 1341 aa18.58■□□□□ 0.56
SEC16A-202ENST00000290037 WASHC2CQ9Y4E1 1318 aa18.58■□□□□ 0.56
SEC16A-202ENST00000290037 ZBED9Q6R2W3 1325 aa18.57■□□□□ 0.56
SEC16A-202ENST00000290037 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
SEC16A-202ENST00000290037 MAP3K1Q13233 1512 aa18.57■□□□□ 0.56
SEC16A-202ENST00000290037 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
SEC16A-202ENST00000290037 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
SEC16A-202ENST00000290037 CASKIN1Q8WXD9 1431 aa18.56■□□□□ 0.56
SEC16A-202ENST00000290037 FGD1P98174 961 aa18.56■□□□□ 0.56
SEC16A-202ENST00000290037 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
SEC16A-202ENST00000290037 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
SEC16A-202ENST00000290037 DDX11L8A8MPP1 907 aa18.56■□□□□ 0.56
SEC16A-202ENST00000290037 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
SEC16A-202ENST00000290037 MYBBP1AQ9BQG0 1328 aaKnown RBP18.56■□□□□ 0.56
SEC16A-202ENST00000290037 KCNJ4P48050 445 aa18.54■□□□□ 0.56
SEC16A-202ENST00000290037 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
SEC16A-202ENST00000290037 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
SEC16A-202ENST00000290037 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
SEC16A-202ENST00000290037 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
SEC16A-202ENST00000290037 RRBP1Q9P2E9 1410 aaKnown RBP18.52■□□□□ 0.55
SEC16A-202ENST00000290037 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
SEC16A-202ENST00000290037 GOLGA2Q08379 1002 aa18.5■□□□□ 0.55
SEC16A-202ENST00000290037 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SEC16A-202ENST00000290037 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
SEC16A-202ENST00000290037 CENPQQ7L2Z9 268 aaPredicted RBP18.5■□□□□ 0.55
SEC16A-202ENST00000290037 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
SEC16A-202ENST00000290037 PKD2Q13563 968 aa18.49■□□□□ 0.55
SEC16A-202ENST00000290037 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
SEC16A-202ENST00000290037 ST18O60284 1047 aa18.47■□□□□ 0.55
SEC16A-202ENST00000290037 DHX8Q14562 1220 aaKnown RBP18.47■□□□□ 0.55
SEC16A-202ENST00000290037 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
SEC16A-202ENST00000290037 STK31Q9BXU1 1019 aa18.46■□□□□ 0.54
SEC16A-202ENST00000290037 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
SEC16A-202ENST00000290037 FGD6Q6ZV73 1430 aa18.44■□□□□ 0.54
SEC16A-202ENST00000290037 E9PSI1 815 aa18.44■□□□□ 0.54
SEC16A-202ENST00000290037 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
SEC16A-202ENST00000290037 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
SEC16A-202ENST00000290037 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
SEC16A-202ENST00000290037 IPO9Q96P70 1041 aaKnown RBP18.43■□□□□ 0.54
SEC16A-202ENST00000290037 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.542e-7■■■■■ 36.4
SEC16A-202ENST00000290037 PDIA4P13667 645 aaKnown RBP18.42■□□□□ 0.54
SEC16A-202ENST00000290037 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
SEC16A-202ENST00000290037 CCDC7Q96M83 1385 aa18.41■□□□□ 0.54
SEC16A-202ENST00000290037 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
SEC16A-202ENST00000290037 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
SEC16A-202ENST00000290037 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms