RNA–Protein interactions for RNA: ENST00000278559.7

CAPN5-201, Transcript of calpain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN5, Length 4,397 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-201ENST00000278559 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
CAPN5-201ENST00000278559 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.45
CAPN5-201ENST00000278559 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.45
CAPN5-201ENST00000278559 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
CAPN5-201ENST00000278559 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
CAPN5-201ENST00000278559 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
CAPN5-201ENST00000278559 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
CAPN5-201ENST00000278559 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
CAPN5-201ENST00000278559 UPF2Q9HAU5 1272 aaKnown RBP17.86■□□□□ 0.45
CAPN5-201ENST00000278559 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
CAPN5-201ENST00000278559 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
CAPN5-201ENST00000278559 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
CAPN5-201ENST00000278559 NUDCQ9Y266 331 aa17.84■□□□□ 0.45
CAPN5-201ENST00000278559 FYCO1Q9BQS8 1478 aa17.83■□□□□ 0.45
CAPN5-201ENST00000278559 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.45
CAPN5-201ENST00000278559 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.45
CAPN5-201ENST00000278559 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
CAPN5-201ENST00000278559 TNNT2P45379 298 aaPredicted RBP17.79■□□□□ 0.44
CAPN5-201ENST00000278559 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
CAPN5-201ENST00000278559 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
CAPN5-201ENST00000278559 SRPK2P78362 688 aaKnown RBP17.78■□□□□ 0.44
CAPN5-201ENST00000278559 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
CAPN5-201ENST00000278559 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
CAPN5-201ENST00000278559 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.44
CAPN5-201ENST00000278559 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.44
CAPN5-201ENST00000278559 KTN1Q86UP2 1357 aaKnown RBP17.77■□□□□ 0.44
CAPN5-201ENST00000278559 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
CAPN5-201ENST00000278559 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
CAPN5-201ENST00000278559 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
CAPN5-201ENST00000278559 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
CAPN5-201ENST00000278559 SAFB2Q14151 953 aaKnown RBP eCLIP17.75■□□□□ 0.43
CAPN5-201ENST00000278559 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
CAPN5-201ENST00000278559 RALBP1Q15311 655 aa17.74■□□□□ 0.43
CAPN5-201ENST00000278559 UACAQ9BZF9 1416 aa17.74■□□□□ 0.43
CAPN5-201ENST00000278559 STK26Q9P289 416 aa17.74■□□□□ 0.43
CAPN5-201ENST00000278559 MORC1Q86VD1 984 aa17.73■□□□□ 0.43
CAPN5-201ENST00000278559 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
CAPN5-201ENST00000278559 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
CAPN5-201ENST00000278559 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
CAPN5-201ENST00000278559 EIF3AQ14152 1382 aaKnown RBP17.72■□□□□ 0.43
CAPN5-201ENST00000278559 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
CAPN5-201ENST00000278559 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
CAPN5-201ENST00000278559 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
CAPN5-201ENST00000278559 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
CAPN5-201ENST00000278559 HSP90AA1P07900 732 aaKnown RBP17.7■□□□□ 0.42
CAPN5-201ENST00000278559 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
CAPN5-201ENST00000278559 PRG4Q92954 1404 aaPredicted RBP17.69■□□□□ 0.42
CAPN5-201ENST00000278559 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
CAPN5-201ENST00000278559 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
CAPN5-201ENST00000278559 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
CAPN5-201ENST00000278559 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
CAPN5-201ENST00000278559 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
CAPN5-201ENST00000278559 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
CAPN5-201ENST00000278559 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
CAPN5-201ENST00000278559 TIAM1Q13009 1591 aa17.64■□□□□ 0.42
CAPN5-201ENST00000278559 KIAA0586Q9BVV6 1533 aa17.64■□□□□ 0.41
CAPN5-201ENST00000278559 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
CAPN5-201ENST00000278559 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
CAPN5-201ENST00000278559 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
CAPN5-201ENST00000278559 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
CAPN5-201ENST00000278559 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
CAPN5-201ENST00000278559 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
CAPN5-201ENST00000278559 USP47Q96K76 1375 aa17.61■□□□□ 0.41
CAPN5-201ENST00000278559 HAP1P54257 671 aaPredicted RBP17.6■□□□□ 0.41
CAPN5-201ENST00000278559 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
CAPN5-201ENST00000278559 MS4A1P11836 297 aa17.58■□□□□ 0.41
CAPN5-201ENST00000278559 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
CAPN5-201ENST00000278559 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
CAPN5-201ENST00000278559 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
CAPN5-201ENST00000278559 HECW1Q76N89 1606 aa17.56■□□□□ 0.4
CAPN5-201ENST00000278559 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
CAPN5-201ENST00000278559 CUL7Q14999 1698 aa17.56■□□□□ 0.4
CAPN5-201ENST00000278559 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
CAPN5-201ENST00000278559 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
CAPN5-201ENST00000278559 TERF2IPQ9NYB0 399 aa17.56■□□□□ 0.4
CAPN5-201ENST00000278559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.55■□□□□ 0.4
CAPN5-201ENST00000278559 PRKRIP1Q9H875 184 aaPredicted RBP17.55■□□□□ 0.4
CAPN5-201ENST00000278559 STAC3Q96MF2 364 aa17.55■□□□□ 0.4
CAPN5-201ENST00000278559 HFM1A2PYH4 1435 aa17.54■□□□□ 0.4
CAPN5-201ENST00000278559 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
CAPN5-201ENST00000278559 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
CAPN5-201ENST00000278559 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
CAPN5-201ENST00000278559 SOX12O15370 315 aa17.53■□□□□ 0.4
CAPN5-201ENST00000278559 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
CAPN5-201ENST00000278559 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
CAPN5-201ENST00000278559 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
CAPN5-201ENST00000278559 ERICH6BQ5W0A0 696 aa17.53■□□□□ 0.4
CAPN5-201ENST00000278559 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
CAPN5-201ENST00000278559 A0A0G2JS52 829 aa17.52■□□□□ 0.39
CAPN5-201ENST00000278559 EPRSP07814 1512 aaKnown RBP17.51■□□□□ 0.39
CAPN5-201ENST00000278559 PANK3Q9H999 370 aa17.51■□□□□ 0.39
CAPN5-201ENST00000278559 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
CAPN5-201ENST00000278559 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
CAPN5-201ENST00000278559 DDRGK1Q96HY6 314 aa17.5■□□□□ 0.39
CAPN5-201ENST00000278559 RCAN3Q9UKA8 241 aa17.49■□□□□ 0.39
CAPN5-201ENST00000278559 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
CAPN5-201ENST00000278559 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
CAPN5-201ENST00000278559 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
CAPN5-201ENST00000278559 RGS3P49796 1198 aa17.47■□□□□ 0.39
CAPN5-201ENST00000278559 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms