RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 ERICH6BQ5W0A0 696 aa10.49□□□□□ -0.73
TRIM6-201ENST00000278302 UBE2Q2Q8WVN8 375 aa10.48□□□□□ -0.73
TRIM6-201ENST00000278302 TCOF1Q13428 1488 aaKnown RBP10.48□□□□□ -0.73
TRIM6-201ENST00000278302 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
TRIM6-201ENST00000278302 WDR62O43379 1518 aa10.47□□□□□ -0.73
TRIM6-201ENST00000278302 FBLN2P98095 1184 aa10.46□□□□□ -0.73
TRIM6-201ENST00000278302 MPHOSPH9Q99550 1183 aa10.46□□□□□ -0.73
TRIM6-201ENST00000278302 CCER2I3L3R5 266 aa10.46□□□□□ -0.73
TRIM6-201ENST00000278302 KIAA0586Q9BVV6 1533 aa10.46□□□□□ -0.74
TRIM6-201ENST00000278302 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.74
TRIM6-201ENST00000278302 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
TRIM6-201ENST00000278302 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRIM6-201ENST00000278302 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
TRIM6-201ENST00000278302 FOXD1Q16676 465 aa10.44□□□□□ -0.74
TRIM6-201ENST00000278302 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
TRIM6-201ENST00000278302 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
TRIM6-201ENST00000278302 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
TRIM6-201ENST00000278302 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
TRIM6-201ENST00000278302 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
TRIM6-201ENST00000278302 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
TRIM6-201ENST00000278302 DISP1Q96F81 1524 aa10.42□□□□□ -0.74
TRIM6-201ENST00000278302 HSPA5P11021 654 aaKnown RBP10.42□□□□□ -0.74
TRIM6-201ENST00000278302 KDM6BO15054 1643 aa10.42□□□□□ -0.74
TRIM6-201ENST00000278302 EIF5BO60841 1220 aaKnown RBP10.41□□□□□ -0.74
TRIM6-201ENST00000278302 EIF4G2P78344 907 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM6-201ENST00000278302 DAPK1P53355 1430 aa10.41□□□□□ -0.74
TRIM6-201ENST00000278302 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
TRIM6-201ENST00000278302 ZNF777Q9ULD5 760 aaPredicted RBP10.41□□□□□ -0.74
TRIM6-201ENST00000278302 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
TRIM6-201ENST00000278302 EIF4G3O43432 1585 aaKnown RBP10.4□□□□□ -0.74
TRIM6-201ENST00000278302 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
TRIM6-201ENST00000278302 SLC4A1APQ9BWU0 796 aaKnown RBP10.4□□□□□ -0.74
TRIM6-201ENST00000278302 CFDP1Q9UEE9 299 aaPredicted RBP10.4□□□□□ -0.74
TRIM6-201ENST00000278302 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
TRIM6-201ENST00000278302 ABCC5O15440 1437 aa10.39□□□□□ -0.75
TRIM6-201ENST00000278302 DENND4BO75064 1496 aaPredicted RBP10.38□□□□□ -0.75
TRIM6-201ENST00000278302 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
TRIM6-201ENST00000278302 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
TRIM6-201ENST00000278302 PRG4Q92954 1404 aaPredicted RBP10.38□□□□□ -0.75
TRIM6-201ENST00000278302 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
TRIM6-201ENST00000278302 WASHC2AQ641Q2 1341 aa10.36□□□□□ -0.75
TRIM6-201ENST00000278302 MAGI1Q96QZ7 1491 aaPredicted RBP10.36□□□□□ -0.75
TRIM6-201ENST00000278302 CARMIL2Q6F5E8 1435 aa10.36□□□□□ -0.75
TRIM6-201ENST00000278302 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
TRIM6-201ENST00000278302 TROQ12816 1431 aaPredicted RBP10.36□□□□□ -0.75
TRIM6-201ENST00000278302 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
TRIM6-201ENST00000278302 PLB1Q6P1J6 1458 aa10.35□□□□□ -0.75
TRIM6-201ENST00000278302 ANKRD30BQ9BXX2 1392 aa10.35□□□□□ -0.75
TRIM6-201ENST00000278302 PLEKHD1A6NEE1 506 aa10.34□□□□□ -0.75
TRIM6-201ENST00000278302 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
TRIM6-201ENST00000278302 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
TRIM6-201ENST00000278302 ANP32AP39687 249 aaKnown RBP10.33□□□□□ -0.76
TRIM6-201ENST00000278302 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
TRIM6-201ENST00000278302 IPO9Q96P70 1041 aaKnown RBP10.33□□□□□ -0.76
TRIM6-201ENST00000278302 CAMSAP2Q08AD1 1489 aa10.32□□□□□ -0.76
TRIM6-201ENST00000278302 RPRD2Q5VT52 1461 aaKnown RBP10.32□□□□□ -0.76
TRIM6-201ENST00000278302 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
TRIM6-201ENST00000278302 GPATCH8Q9UKJ3 1502 aaKnown RBP10.31□□□□□ -0.76
TRIM6-201ENST00000278302 ZNF326Q5BKZ1 582 aaKnown RBP10.3□□□□□ -0.76
TRIM6-201ENST00000278302 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
TRIM6-201ENST00000278302 C11orf95C9JLR9 678 aaPredicted RBP10.3□□□□□ -0.76
TRIM6-201ENST00000278302 ITSN2Q9NZM3 1697 aa10.3□□□□□ -0.76
TRIM6-201ENST00000278302 ANKRD30AQ9BXX3 1397 aa10.3□□□□□ -0.76
TRIM6-201ENST00000278302 NCOA1Q15788 1441 aa10.3□□□□□ -0.76
TRIM6-201ENST00000278302 PKD2Q13563 968 aa10.29□□□□□ -0.76
TRIM6-201ENST00000278302 CCDC7Q96M83 1385 aa10.29□□□□□ -0.76
TRIM6-201ENST00000278302 CNTLNQ9NXG0 1405 aa10.29□□□□□ -0.76
TRIM6-201ENST00000278302 NEFMP07197 916 aa10.29□□□□□ -0.76
TRIM6-201ENST00000278302 NPM2Q86SE8 214 aaKnown RBP10.29□□□□□ -0.76
TRIM6-201ENST00000278302 KIF14Q15058 1648 aa10.29□□□□□ -0.76
TRIM6-201ENST00000278302 TSPY4P0CV99 314 aa10.28□□□□□ -0.76
TRIM6-201ENST00000278302 TSPY10P0CW01 314 aa10.28□□□□□ -0.76
TRIM6-201ENST00000278302 NUP160Q12769 1436 aa10.28□□□□□ -0.76
TRIM6-201ENST00000278302 POLR3GLQ9BT43 218 aa10.28□□□□□ -0.76
TRIM6-201ENST00000278302 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.77
TRIM6-201ENST00000278302 PZPP20742 1482 aa10.27□□□□□ -0.77
TRIM6-201ENST00000278302 FAM9BQ8IZU0 186 aa10.26□□□□□ -0.77
TRIM6-201ENST00000278302 TEX14Q8IWB6 1497 aa10.26□□□□□ -0.77
TRIM6-201ENST00000278302 CCDC184Q52MB2 194 aa10.26□□□□□ -0.77
TRIM6-201ENST00000278302 PRKRIP1Q9H875 184 aaPredicted RBP10.26□□□□□ -0.77
TRIM6-201ENST00000278302 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
TRIM6-201ENST00000278302 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
TRIM6-201ENST00000278302 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
TRIM6-201ENST00000278302 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
TRIM6-201ENST00000278302 CNGB1Q14028 1251 aaPredicted RBP10.25□□□□□ -0.77
TRIM6-201ENST00000278302 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
TRIM6-201ENST00000278302 KIF7Q2M1P5 1343 aa10.25□□□□□ -0.77
TRIM6-201ENST00000278302 NUP155O75694 1391 aa10.25□□□□□ -0.77
TRIM6-201ENST00000278302 ATP10BO94823 1461 aa10.25□□□□□ -0.77
TRIM6-201ENST00000278302 HNRNPMP52272 730 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRIM6-201ENST00000278302 ADGRL2O95490 1459 aa10.24□□□□□ -0.77
TRIM6-201ENST00000278302 PTPRGP23470 1445 aa10.23□□□□□ -0.77
TRIM6-201ENST00000278302 ABCA8O94911 1581 aa10.23□□□□□ -0.77
TRIM6-201ENST00000278302 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
TRIM6-201ENST00000278302 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
TRIM6-201ENST00000278302 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
TRIM6-201ENST00000278302 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.77
TRIM6-201ENST00000278302 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.78
TRIM6-201ENST00000278302 ABCC10Q5T3U5 1492 aa10.2□□□□□ -0.78
TRIM6-201ENST00000278302 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms