RNA–Protein interactions for RNA: ENST00000273739.9

SLIT2-201, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 5,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-201ENST00000273739 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
SLIT2-201ENST00000273739 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
SLIT2-201ENST00000273739 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
SLIT2-201ENST00000273739 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
SLIT2-201ENST00000273739 ATF3P18847 181 aa16.21■□□□□ 0.18
SLIT2-201ENST00000273739 EVA1CP58658 441 aa16.2■□□□□ 0.18
SLIT2-201ENST00000273739 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
SLIT2-201ENST00000273739 HIRIP3Q9BW71 556 aaPredicted RBP16.2■□□□□ 0.18
SLIT2-201ENST00000273739 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
SLIT2-201ENST00000273739 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
SLIT2-201ENST00000273739 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
SLIT2-201ENST00000273739 RTF1Q92541 710 aaKnown RBP16.16■□□□□ 0.18
SLIT2-201ENST00000273739 FOXD1Q16676 465 aa16.15■□□□□ 0.18
SLIT2-201ENST00000273739 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
SLIT2-201ENST00000273739 ZNF330Q9Y3S2 320 aaPredicted RBP16.15■□□□□ 0.18
SLIT2-201ENST00000273739 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
SLIT2-201ENST00000273739 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
SLIT2-201ENST00000273739 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
SLIT2-201ENST00000273739 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
SLIT2-201ENST00000273739 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
SLIT2-201ENST00000273739 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
SLIT2-201ENST00000273739 CFTRP13569 1480 aa16.11■□□□□ 0.17
SLIT2-201ENST00000273739 MSH5O43196 834 aa16.11■□□□□ 0.17
SLIT2-201ENST00000273739 TERF2IPQ9NYB0 399 aa16.11■□□□□ 0.17
SLIT2-201ENST00000273739 EIF3AQ14152 1382 aaKnown RBP16.11■□□□□ 0.17
SLIT2-201ENST00000273739 IGF1RP08069 1367 aa16.1■□□□□ 0.17
SLIT2-201ENST00000273739 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.17
SLIT2-201ENST00000273739 AMPHP49418 695 aa16.08■□□□□ 0.16
SLIT2-201ENST00000273739 FKBP8Q14318 412 aa16.08■□□□□ 0.16
SLIT2-201ENST00000273739 SYNJ2O15056 1496 aa16.07■□□□□ 0.16
SLIT2-201ENST00000273739 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
SLIT2-201ENST00000273739 CC2D1BQ5T0F9 858 aaKnown RBP16.07■□□□□ 0.16
SLIT2-201ENST00000273739 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
SLIT2-201ENST00000273739 HSP90AA1P07900 732 aaKnown RBP16.06■□□□□ 0.16
SLIT2-201ENST00000273739 PSME1Q06323 249 aa16.06■□□□□ 0.16
SLIT2-201ENST00000273739 SIN3AQ96ST3 1273 aa16.06■□□□□ 0.16
SLIT2-201ENST00000273739 UPF2Q9HAU5 1272 aaKnown RBP16.06■□□□□ 0.16
SLIT2-201ENST00000273739 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
SLIT2-201ENST00000273739 THEMISQ8N1K5 641 aaPredicted RBP16.05■□□□□ 0.16
SLIT2-201ENST00000273739 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
SLIT2-201ENST00000273739 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
SLIT2-201ENST00000273739 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
SLIT2-201ENST00000273739 LTV1Q96GA3 475 aaPredicted RBP16.03■□□□□ 0.16
SLIT2-201ENST00000273739 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
SLIT2-201ENST00000273739 ROCK2O75116 1388 aaKnown RBP16.02■□□□□ 0.16
SLIT2-201ENST00000273739 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.15
SLIT2-201ENST00000273739 OS9Q13438 667 aaPredicted RBP16.01■□□□□ 0.15
SLIT2-201ENST00000273739 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
SLIT2-201ENST00000273739 G3V3G9 751 aa16.01■□□□□ 0.15
SLIT2-201ENST00000273739 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SLIT2-201ENST00000273739 SETD5Q9C0A6 1442 aa16■□□□□ 0.15
SLIT2-201ENST00000273739 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SLIT2-201ENST00000273739 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
SLIT2-201ENST00000273739 KLHL34Q8N239 644 aa16■□□□□ 0.15
SLIT2-201ENST00000273739 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
SLIT2-201ENST00000273739 ANKLE2Q86XL3 938 aa15.99■□□□□ 0.15
SLIT2-201ENST00000273739 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
SLIT2-201ENST00000273739 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
SLIT2-201ENST00000273739 CHMP4AQ9BY43 222 aa15.98■□□□□ 0.15
SLIT2-201ENST00000273739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
SLIT2-201ENST00000273739 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
SLIT2-201ENST00000273739 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
SLIT2-201ENST00000273739 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
SLIT2-201ENST00000273739 RAPGEF3O95398 923 aa15.95■□□□□ 0.14
SLIT2-201ENST00000273739 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
SLIT2-201ENST00000273739 NUTM2BA6NNL0 878 aaPredicted RBP15.93■□□□□ 0.14
SLIT2-201ENST00000273739 NUTM2EB1AL46 878 aaPredicted RBP15.93■□□□□ 0.14
SLIT2-201ENST00000273739 NUTM2AQ8IVF1 878 aaPredicted RBP15.93■□□□□ 0.14
SLIT2-201ENST00000273739 SYTL4Q96C24 671 aaPredicted RBP15.92■□□□□ 0.14
SLIT2-201ENST00000273739 CHMP4BQ9H444 224 aaKnown RBP15.92■□□□□ 0.14
SLIT2-201ENST00000273739 MINK1Q8N4C8 1332 aaPredicted RBP15.91■□□□□ 0.14
SLIT2-201ENST00000273739 COG3Q96JB2 828 aa15.89■□□□□ 0.14
SLIT2-201ENST00000273739 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
SLIT2-201ENST00000273739 CALD1Q05682 793 aaKnown RBP15.89■□□□□ 0.13
SLIT2-201ENST00000273739 U2AF1L5P0DN76 240 aaPredicted RBP15.88■□□□□ 0.13
SLIT2-201ENST00000273739 U2AF1Q01081 240 aaKnown RBP eCLIP15.88■□□□□ 0.13
SLIT2-201ENST00000273739 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
SLIT2-201ENST00000273739 C1orf141Q5JVX7 400 aa15.88■□□□□ 0.13
SLIT2-201ENST00000273739 ISY1Q9ULR0 285 aaKnown RBP15.87■□□□□ 0.13
SLIT2-201ENST00000273739 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
SLIT2-201ENST00000273739 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
SLIT2-201ENST00000273739 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
SLIT2-201ENST00000273739 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
SLIT2-201ENST00000273739 MIER1Q8N108 512 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 GPRASP1Q5JY77 1395 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
SLIT2-201ENST00000273739 MS4A1P11836 297 aa15.84■□□□□ 0.13
SLIT2-201ENST00000273739 TAF7LQ5H9L4 462 aa15.83■□□□□ 0.13
SLIT2-201ENST00000273739 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
SLIT2-201ENST00000273739 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
SLIT2-201ENST00000273739 SENP3-EIF4A1A0A087X0R7 540 aa15.82■□□□□ 0.12
SLIT2-201ENST00000273739 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
SLIT2-201ENST00000273739 ANP32BQ92688 251 aaKnown RBP15.82■□□□□ 0.12
SLIT2-201ENST00000273739 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
SLIT2-201ENST00000273739 CDK11BP21127 795 aaKnown RBP15.81■□□□□ 0.12
SLIT2-201ENST00000273739 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms