RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
ERBB2-201ENST00000269571 KNSTRNQ9Y448 316 aa15.63■□□□□ 0.09
ERBB2-201ENST00000269571 L1TD1Q5T7N2 865 aaKnown RBP15.63■□□□□ 0.09
ERBB2-201ENST00000269571 NUDCQ9Y266 331 aa15.63■□□□□ 0.09
ERBB2-201ENST00000269571 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
ERBB2-201ENST00000269571 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
ERBB2-201ENST00000269571 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
ERBB2-201ENST00000269571 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
ERBB2-201ENST00000269571 GSE1Q14687 1217 aa15.59■□□□□ 0.09
ERBB2-201ENST00000269571 DCAF11Q8TEB1 546 aa15.59■□□□□ 0.09
ERBB2-201ENST00000269571 MSH5O43196 834 aa15.58■□□□□ 0.08
ERBB2-201ENST00000269571 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
ERBB2-201ENST00000269571 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
ERBB2-201ENST00000269571 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
ERBB2-201ENST00000269571 PDE4AP27815 886 aa15.57■□□□□ 0.08
ERBB2-201ENST00000269571 PLIN1O60240 522 aa15.56■□□□□ 0.08
ERBB2-201ENST00000269571 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
ERBB2-201ENST00000269571 GOLGA6L22H0YM25 854 aa15.56■□□□□ 0.08
ERBB2-201ENST00000269571 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
ERBB2-201ENST00000269571 ARID3AQ99856 593 aa15.56■□□□□ 0.08
ERBB2-201ENST00000269571 IGF1RP08069 1367 aa15.56■□□□□ 0.08
ERBB2-201ENST00000269571 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-201ENST00000269571 JPH4Q96JJ6 628 aa15.55■□□□□ 0.08
ERBB2-201ENST00000269571 PRKRIP1Q9H875 184 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-201ENST00000269571 FTSJ3Q8IY81 847 aaKnown RBP15.55■□□□□ 0.08
ERBB2-201ENST00000269571 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
ERBB2-201ENST00000269571 DNTTIP2Q5QJE6 756 aaKnown RBP15.54■□□□□ 0.08
ERBB2-201ENST00000269571 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
ERBB2-201ENST00000269571 PTMAP06454 111 aaKnown RBP15.54■□□□□ 0.08
ERBB2-201ENST00000269571 MPHOSPH9Q99550 1183 aa15.54■□□□□ 0.08
ERBB2-201ENST00000269571 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
ERBB2-201ENST00000269571 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
ERBB2-201ENST00000269571 MYH16Q9H6N6 1097 aa15.49■□□□□ 0.07
ERBB2-201ENST00000269571 HSP90AB1P08238 724 aaKnown RBP15.49■□□□□ 0.07
ERBB2-201ENST00000269571 PKD2Q13563 968 aa15.48■□□□□ 0.07
ERBB2-201ENST00000269571 PLCB2Q00722 1185 aa15.47■□□□□ 0.07
ERBB2-201ENST00000269571 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
ERBB2-201ENST00000269571 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.07
ERBB2-201ENST00000269571 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
ERBB2-201ENST00000269571 NESP48681 1621 aa15.46■□□□□ 0.07
ERBB2-201ENST00000269571 C14orf37Q86TY3 774 aa15.45■□□□□ 0.06
ERBB2-201ENST00000269571 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
ERBB2-201ENST00000269571 HNRNPMP52272 730 aaKnown RBP eCLIP15.44■□□□□ 0.06
ERBB2-201ENST00000269571 HSCBQ8IWL3 235 aa15.43■□□□□ 0.06
ERBB2-201ENST00000269571 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
ERBB2-201ENST00000269571 GGT6Q6P531 493 aa15.42■□□□□ 0.06
ERBB2-201ENST00000269571 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.068e-7■■■■□ 26
ERBB2-201ENST00000269571 CFTRP13569 1480 aa15.41■□□□□ 0.06
ERBB2-201ENST00000269571 MLECQ14165 292 aa15.41■□□□□ 0.06
ERBB2-201ENST00000269571 MSNP26038 577 aaKnown RBP15.41■□□□□ 0.06
ERBB2-201ENST00000269571 RRP1P56182 461 aaKnown RBP15.41■□□□□ 0.06
ERBB2-201ENST00000269571 CLUAP1Q96AJ1 413 aa15.4■□□□□ 0.06
ERBB2-201ENST00000269571 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
ERBB2-201ENST00000269571 CRBNQ96SW2 442 aa15.4■□□□□ 0.06
ERBB2-201ENST00000269571 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
ERBB2-201ENST00000269571 TMF1P82094 1093 aa15.4■□□□□ 0.06
ERBB2-201ENST00000269571 GOLGA6L3A6NEY3 463 aa15.39■□□□□ 0.05
ERBB2-201ENST00000269571 U2SURPO15042 1029 aaKnown RBP15.39■□□□□ 0.05
ERBB2-201ENST00000269571 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
ERBB2-201ENST00000269571 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
ERBB2-201ENST00000269571 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
ERBB2-201ENST00000269571 NUP155O75694 1391 aa15.38■□□□□ 0.05
ERBB2-201ENST00000269571 BICRAQ9NZM4 1560 aa15.38■□□□□ 0.05
ERBB2-201ENST00000269571 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
ERBB2-201ENST00000269571 RALBP1Q15311 655 aa15.37■□□□□ 0.05
ERBB2-201ENST00000269571 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
ERBB2-201ENST00000269571 ZMYND15Q9H091 742 aa15.37■□□□□ 0.05
ERBB2-201ENST00000269571 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
ERBB2-201ENST00000269571 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
ERBB2-201ENST00000269571 ST20-MTHFSA0A0A6YYL1 179 aa15.36■□□□□ 0.05
ERBB2-201ENST00000269571 A0A0G2JS52 829 aa15.36■□□□□ 0.05
ERBB2-201ENST00000269571 SAFB2Q14151 953 aaKnown RBP eCLIP15.35■□□□□ 0.05
ERBB2-201ENST00000269571 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
ERBB2-201ENST00000269571 POGKQ9P215 609 aa15.35■□□□□ 0.05
ERBB2-201ENST00000269571 WASHC2AQ641Q2 1341 aa15.35■□□□□ 0.05
ERBB2-201ENST00000269571 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
ERBB2-201ENST00000269571 FAM43AQ8N2R8 423 aa15.33■□□□□ 0.05
ERBB2-201ENST00000269571 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
ERBB2-201ENST00000269571 FAM161AQ3B820 660 aa15.32■□□□□ 0.04
ERBB2-201ENST00000269571 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-201ENST00000269571 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
ERBB2-201ENST00000269571 APBB1O00213 710 aa15.31■□□□□ 0.04
ERBB2-201ENST00000269571 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
ERBB2-201ENST00000269571 PTPRGP23470 1445 aa15.31■□□□□ 0.04
ERBB2-201ENST00000269571 KIF3BO15066 747 aa15.3■□□□□ 0.04
ERBB2-201ENST00000269571 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
ERBB2-201ENST00000269571 KIF21BO75037 1637 aa15.3■□□□□ 0.04
ERBB2-201ENST00000269571 PDE3BQ13370 1112 aa15.29■□□□□ 0.04
ERBB2-201ENST00000269571 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
ERBB2-201ENST00000269571 SOX12O15370 315 aa15.28■□□□□ 0.04
ERBB2-201ENST00000269571 RRP9O43818 475 aaKnown RBP15.28■□□□□ 0.04
ERBB2-201ENST00000269571 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-201ENST00000269571 KANK1Q14678 1352 aa15.27■□□□□ 0.04
ERBB2-201ENST00000269571 KIF7Q2M1P5 1343 aa15.27■□□□□ 0.04
ERBB2-201ENST00000269571 CUX1P39880 1505 aa15.27■□□□□ 0.04
ERBB2-201ENST00000269571 AKNAQ7Z591 1439 aa15.27■□□□□ 0.03
ERBB2-201ENST00000269571 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
ERBB2-201ENST00000269571 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-201ENST00000269571 MS4A1P11836 297 aa15.26■□□□□ 0.03
ERBB2-201ENST00000269571 CENPQQ7L2Z9 268 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms