RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 GSE1Q14687 1217 aa19.05■□□□□ 0.64
PDPK1-201ENST00000268673 MYH16Q9H6N6 1097 aa19.05■□□□□ 0.64
PDPK1-201ENST00000268673 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
PDPK1-201ENST00000268673 NLRP13Q86W25 1043 aa19.03■□□□□ 0.64
PDPK1-201ENST00000268673 FTSJ3Q8IY81 847 aaKnown RBP19.02■□□□□ 0.64
PDPK1-201ENST00000268673 FHOD3Q2V2M9 1422 aa19.02■□□□□ 0.64
PDPK1-201ENST00000268673 CFAP53Q96M91 514 aa19.02■□□□□ 0.64
PDPK1-201ENST00000268673 SYNJ1O43426 1573 aa19.02■□□□□ 0.63
PDPK1-201ENST00000268673 PKD2Q13563 968 aa19.02■□□□□ 0.63
PDPK1-201ENST00000268673 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
PDPK1-201ENST00000268673 ZBTB7CA1YPR0 619 aa19.01■□□□□ 0.63
PDPK1-201ENST00000268673 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
PDPK1-201ENST00000268673 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
PDPK1-201ENST00000268673 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
PDPK1-201ENST00000268673 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
PDPK1-201ENST00000268673 KIF15Q9NS87 1388 aa18.98■□□□□ 0.63
PDPK1-201ENST00000268673 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
PDPK1-201ENST00000268673 UACAQ9BZF9 1416 aa18.97■□□□□ 0.63
PDPK1-201ENST00000268673 EXOC6Q8TAG9 804 aa18.97■□□□□ 0.63
PDPK1-201ENST00000268673 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
PDPK1-201ENST00000268673 HSCBQ8IWL3 235 aa18.96■□□□□ 0.63
PDPK1-201ENST00000268673 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
PDPK1-201ENST00000268673 POGKQ9P215 609 aa18.96■□□□□ 0.63
PDPK1-201ENST00000268673 PHLDB1Q86UU1 1377 aa18.95■□□□□ 0.62
PDPK1-201ENST00000268673 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
PDPK1-201ENST00000268673 CCDC7Q96M83 1385 aa18.95■□□□□ 0.62
PDPK1-201ENST00000268673 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
PDPK1-201ENST00000268673 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
PDPK1-201ENST00000268673 HSP90AB1P08238 724 aaKnown RBP18.93■□□□□ 0.62
PDPK1-201ENST00000268673 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
PDPK1-201ENST00000268673 SLKQ9H2G2 1235 aaPredicted RBP18.93■□□□□ 0.62
PDPK1-201ENST00000268673 MSH5O43196 834 aa18.93■□□□□ 0.62
PDPK1-201ENST00000268673 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
PDPK1-201ENST00000268673 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
PDPK1-201ENST00000268673 A0A0G2JS52 829 aa18.92■□□□□ 0.62
PDPK1-201ENST00000268673 CENPQQ7L2Z9 268 aaPredicted RBP18.92■□□□□ 0.62
PDPK1-201ENST00000268673 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
PDPK1-201ENST00000268673 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
PDPK1-201ENST00000268673 GOLGA6L3A6NEY3 463 aa18.91■□□□□ 0.62
PDPK1-201ENST00000268673 PTMAP06454 111 aaKnown RBP18.9■□□□□ 0.62
PDPK1-201ENST00000268673 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
PDPK1-201ENST00000268673 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
PDPK1-201ENST00000268673 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
PDPK1-201ENST00000268673 GOLGA2Q08379 1002 aa18.89■□□□□ 0.61
PDPK1-201ENST00000268673 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
PDPK1-201ENST00000268673 CHMP4BQ9H444 224 aaKnown RBP18.87■□□□□ 0.61
PDPK1-201ENST00000268673 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
PDPK1-201ENST00000268673 PTMSP20962 102 aa18.86■□□□□ 0.61
PDPK1-201ENST00000268673 MSNP26038 577 aaKnown RBP18.86■□□□□ 0.61
PDPK1-201ENST00000268673 KIF7Q2M1P5 1343 aa18.86■□□□□ 0.61
PDPK1-201ENST00000268673 KANK1Q14678 1352 aa18.86■□□□□ 0.61
PDPK1-201ENST00000268673 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
PDPK1-201ENST00000268673 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
PDPK1-201ENST00000268673 USP47Q96K76 1375 aa18.85■□□□□ 0.61
PDPK1-201ENST00000268673 GGT6Q6P531 493 aa18.85■□□□□ 0.61
PDPK1-201ENST00000268673 SPRYD3Q8NCJ5 442 aa18.85■□□□□ 0.61
PDPK1-201ENST00000268673 ANKRD30AQ9BXX3 1397 aa18.85■□□□□ 0.61
PDPK1-201ENST00000268673 MLECQ14165 292 aa18.85■□□□□ 0.61
PDPK1-201ENST00000268673 DNTTIP2Q5QJE6 756 aaKnown RBP18.85■□□□□ 0.61
PDPK1-201ENST00000268673 NUP155O75694 1391 aa18.84■□□□□ 0.61
PDPK1-201ENST00000268673 SLC4A3P48751 1232 aa18.84■□□□□ 0.61
PDPK1-201ENST00000268673 CASC1Q6TDU7 716 aa18.84■□□□□ 0.61
PDPK1-201ENST00000268673 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
PDPK1-201ENST00000268673 GZF1Q9H116 711 aaPredicted RBP18.84■□□□□ 0.61
PDPK1-201ENST00000268673 PMFBP1Q8TBY8 1022 aa18.83■□□□□ 0.61
PDPK1-201ENST00000268673 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
PDPK1-201ENST00000268673 IGF1RP08069 1367 aa18.83■□□□□ 0.61
PDPK1-201ENST00000268673 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.6
PDPK1-201ENST00000268673 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
PDPK1-201ENST00000268673 EFCAB2Q5VUJ9 269 aa18.82■□□□□ 0.6
PDPK1-201ENST00000268673 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
PDPK1-201ENST00000268673 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
PDPK1-201ENST00000268673 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
PDPK1-201ENST00000268673 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
PDPK1-201ENST00000268673 PLIN1O60240 522 aa18.8■□□□□ 0.6
PDPK1-201ENST00000268673 LMOD2Q6P5Q4 547 aa18.8■□□□□ 0.6
PDPK1-201ENST00000268673 NFKBIBQ15653 356 aa18.79■□□□□ 0.6
PDPK1-201ENST00000268673 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
PDPK1-201ENST00000268673 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
PDPK1-201ENST00000268673 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
PDPK1-201ENST00000268673 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.59
PDPK1-201ENST00000268673 CUX1P39880 1505 aa18.76■□□□□ 0.59
PDPK1-201ENST00000268673 HSP90AA2PQ14568 343 aaPredicted RBP18.76■□□□□ 0.59
PDPK1-201ENST00000268673 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
PDPK1-201ENST00000268673 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
PDPK1-201ENST00000268673 IL27Q8NEV9 243 aa18.75■□□□□ 0.59
PDPK1-201ENST00000268673 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
PDPK1-201ENST00000268673 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDPK1-201ENST00000268673 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
PDPK1-201ENST00000268673 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
PDPK1-201ENST00000268673 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
PDPK1-201ENST00000268673 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
PDPK1-201ENST00000268673 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
PDPK1-201ENST00000268673 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
PDPK1-201ENST00000268673 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
PDPK1-201ENST00000268673 AKNAQ7Z591 1439 aa18.71■□□□□ 0.59
PDPK1-201ENST00000268673 DDX11L8A8MPP1 907 aa18.7■□□□□ 0.58
PDPK1-201ENST00000268673 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
PDPK1-201ENST00000268673 CGNL1Q0VF96 1302 aa18.7■□□□□ 0.58
PDPK1-201ENST00000268673 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms