RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
SCAMP2-201ENST00000268099 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
SCAMP2-201ENST00000268099 MPHOSPH9Q99550 1183 aa20.8■□□□□ 0.92
SCAMP2-201ENST00000268099 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
SCAMP2-201ENST00000268099 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
SCAMP2-201ENST00000268099 SAMD9Q5K651 1589 aa20.79■□□□□ 0.92
SCAMP2-201ENST00000268099 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
SCAMP2-201ENST00000268099 TCOF1Q13428 1488 aaKnown RBP20.78■□□□□ 0.92
SCAMP2-201ENST00000268099 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
SCAMP2-201ENST00000268099 SALL2Q9Y467 1007 aaPredicted RBP20.78■□□□□ 0.92
SCAMP2-201ENST00000268099 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.91
SCAMP2-201ENST00000268099 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
SCAMP2-201ENST00000268099 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
SCAMP2-201ENST00000268099 FOXD1Q16676 465 aa20.75■□□□□ 0.91
SCAMP2-201ENST00000268099 RPRD2Q5VT52 1461 aaKnown RBP20.74■□□□□ 0.91
SCAMP2-201ENST00000268099 DHX29Q7Z478 1369 aaKnown RBP20.73■□□□□ 0.91
SCAMP2-201ENST00000268099 MAGI3Q5TCQ9 1506 aa20.72■□□□□ 0.91
SCAMP2-201ENST00000268099 DNMBPQ6XZF7 1577 aa20.71■□□□□ 0.91
SCAMP2-201ENST00000268099 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
SCAMP2-201ENST00000268099 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
SCAMP2-201ENST00000268099 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
SCAMP2-201ENST00000268099 USP35Q9P2H5 1018 aa20.67■□□□□ 0.9
SCAMP2-201ENST00000268099 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
SCAMP2-201ENST00000268099 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
SCAMP2-201ENST00000268099 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
SCAMP2-201ENST00000268099 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
SCAMP2-201ENST00000268099 NEFMP07197 916 aa20.65■□□□□ 0.9
SCAMP2-201ENST00000268099 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
SCAMP2-201ENST00000268099 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.9
SCAMP2-201ENST00000268099 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
SCAMP2-201ENST00000268099 LAS1LQ9Y4W2 734 aaKnown RBP20.63■□□□□ 0.89
SCAMP2-201ENST00000268099 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
SCAMP2-201ENST00000268099 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
SCAMP2-201ENST00000268099 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
SCAMP2-201ENST00000268099 WASHC2CQ9Y4E1 1318 aa20.6■□□□□ 0.89
SCAMP2-201ENST00000268099 PDE4AP27815 886 aa20.6■□□□□ 0.89
SCAMP2-201ENST00000268099 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
SCAMP2-201ENST00000268099 PPM1GO15355 546 aaPredicted RBP20.57■□□□□ 0.88
SCAMP2-201ENST00000268099 BACH2Q9BYV9 841 aa20.57■□□□□ 0.88
SCAMP2-201ENST00000268099 EXOC6Q8TAG9 804 aa20.56■□□□□ 0.88
SCAMP2-201ENST00000268099 TMC1Q8TDI8 760 aa20.56■□□□□ 0.88
SCAMP2-201ENST00000268099 POLR3GLQ9BT43 218 aa20.56■□□□□ 0.88
SCAMP2-201ENST00000268099 NESP48681 1621 aa20.56■□□□□ 0.88
SCAMP2-201ENST00000268099 USP47Q96K76 1375 aa20.55■□□□□ 0.88
SCAMP2-201ENST00000268099 MS4A1P11836 297 aa20.55■□□□□ 0.88
SCAMP2-201ENST00000268099 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
SCAMP2-201ENST00000268099 ARID4BQ4LE39 1312 aaPredicted RBP20.54■□□□□ 0.88
SCAMP2-201ENST00000268099 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
SCAMP2-201ENST00000268099 LRPPRCP42704 1394 aaKnown RBP20.54■□□□□ 0.88
SCAMP2-201ENST00000268099 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
SCAMP2-201ENST00000268099 KDM5CP41229 1560 aa20.52■□□□□ 0.88
SCAMP2-201ENST00000268099 DAPK1P53355 1430 aa20.51■□□□□ 0.87
SCAMP2-201ENST00000268099 KIF14Q15058 1648 aa20.51■□□□□ 0.87
SCAMP2-201ENST00000268099 EPRSP07814 1512 aaKnown RBP20.51■□□□□ 0.87
SCAMP2-201ENST00000268099 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
SCAMP2-201ENST00000268099 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-201ENST00000268099 RCAN3Q9UKA8 241 aa20.49■□□□□ 0.87
SCAMP2-201ENST00000268099 DNMT1P26358 1616 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-201ENST00000268099 BRD4O60885 1362 aaPredicted RBP20.47■□□□□ 0.87
SCAMP2-201ENST00000268099 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
SCAMP2-201ENST00000268099 KIF15Q9NS87 1388 aa20.46■□□□□ 0.87
SCAMP2-201ENST00000268099 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
SCAMP2-201ENST00000268099 ABCC5O15440 1437 aa20.46■□□□□ 0.87
SCAMP2-201ENST00000268099 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
SCAMP2-201ENST00000268099 DDRGK1Q96HY6 314 aa20.45■□□□□ 0.86
SCAMP2-201ENST00000268099 PZPP20742 1482 aa20.44■□□□□ 0.86
SCAMP2-201ENST00000268099 ZNF326Q5BKZ1 582 aaKnown RBP20.44■□□□□ 0.86
SCAMP2-201ENST00000268099 MYBBP1AQ9BQG0 1328 aaKnown RBP20.43■□□□□ 0.86
SCAMP2-201ENST00000268099 GSE1Q14687 1217 aa20.43■□□□□ 0.86
SCAMP2-201ENST00000268099 BRPF3Q9ULD4 1205 aa20.43■□□□□ 0.86
SCAMP2-201ENST00000268099 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
SCAMP2-201ENST00000268099 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
SCAMP2-201ENST00000268099 ARID3CA6NKF2 412 aa20.39■□□□□ 0.86
SCAMP2-201ENST00000268099 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
SCAMP2-201ENST00000268099 RALBP1Q15311 655 aa20.39■□□□□ 0.85
SCAMP2-201ENST00000268099 WDR62O43379 1518 aa20.39■□□□□ 0.85
SCAMP2-201ENST00000268099 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
SCAMP2-201ENST00000268099 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
SCAMP2-201ENST00000268099 E9PCH4 1651 aa20.37■□□□□ 0.85
SCAMP2-201ENST00000268099 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
SCAMP2-201ENST00000268099 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
SCAMP2-201ENST00000268099 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
SCAMP2-201ENST00000268099 UHRF1BP1Q6BDS2 1440 aa20.35■□□□□ 0.85
SCAMP2-201ENST00000268099 UBE2Q2Q8WVN8 375 aa20.33■□□□□ 0.85
SCAMP2-201ENST00000268099 SKAP1Q86WV1 359 aa20.32■□□□□ 0.84
SCAMP2-201ENST00000268099 IQGAP2Q13576 1575 aa20.31■□□□□ 0.84
SCAMP2-201ENST00000268099 FRAT1Q92837 279 aaPredicted RBP20.31■□□□□ 0.84
SCAMP2-201ENST00000268099 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
SCAMP2-201ENST00000268099 ADGBQ8N7X0 1667 aa20.31■□□□□ 0.84
SCAMP2-201ENST00000268099 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
SCAMP2-201ENST00000268099 CDCA7LQ96GN5 454 aa20.3■□□□□ 0.84
SCAMP2-201ENST00000268099 PLIN1O60240 522 aa20.29■□□□□ 0.84
SCAMP2-201ENST00000268099 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
SCAMP2-201ENST00000268099 PKD2Q13563 968 aa20.28■□□□□ 0.84
SCAMP2-201ENST00000268099 SLC4A3P48751 1232 aa20.27■□□□□ 0.84
SCAMP2-201ENST00000268099 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
SCAMP2-201ENST00000268099 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.83
SCAMP2-201ENST00000268099 ARHGEF12Q9NZN5 1544 aa20.26■□□□□ 0.83
SCAMP2-201ENST00000268099 PARD3Q8TEW0 1356 aa20.26■□□□□ 0.83
SCAMP2-201ENST00000268099 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms