RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
SYCP3-201ENST00000266743 CEBPAP49715 358 aaPredicted RBP16.98■□□□□ 0.31
SYCP3-201ENST00000266743 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
SYCP3-201ENST00000266743 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
SYCP3-201ENST00000266743 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
SYCP3-201ENST00000266743 SIGLEC1Q9BZZ2 1709 aa16.96■□□□□ 0.31
SYCP3-201ENST00000266743 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
SYCP3-201ENST00000266743 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
SYCP3-201ENST00000266743 POGZQ7Z3K3 1410 aa16.95■□□□□ 0.3
SYCP3-201ENST00000266743 FANCAO15360 1455 aa16.93■□□□□ 0.3
SYCP3-201ENST00000266743 RNF39Q9H2S5 420 aa16.92■□□□□ 0.3
SYCP3-201ENST00000266743 NUP153P49790 1475 aaKnown RBP16.92■□□□□ 0.3
SYCP3-201ENST00000266743 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
SYCP3-201ENST00000266743 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
SYCP3-201ENST00000266743 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.3
SYCP3-201ENST00000266743 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
SYCP3-201ENST00000266743 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
SYCP3-201ENST00000266743 ZMYM4Q5VZL5 1548 aa16.85■□□□□ 0.29
SYCP3-201ENST00000266743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.29
SYCP3-201ENST00000266743 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
SYCP3-201ENST00000266743 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
SYCP3-201ENST00000266743 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
SYCP3-201ENST00000266743 EFCAB5A4FU69 1503 aa16.84■□□□□ 0.29
SYCP3-201ENST00000266743 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
SYCP3-201ENST00000266743 SAMD9Q5K651 1589 aa16.82■□□□□ 0.28
SYCP3-201ENST00000266743 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
SYCP3-201ENST00000266743 STRCQ7RTU9 1775 aa16.81■□□□□ 0.28
SYCP3-201ENST00000266743 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
SYCP3-201ENST00000266743 ATP10AO60312 1499 aa16.8■□□□□ 0.28
SYCP3-201ENST00000266743 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
SYCP3-201ENST00000266743 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
SYCP3-201ENST00000266743 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
SYCP3-201ENST00000266743 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
SYCP3-201ENST00000266743 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
SYCP3-201ENST00000266743 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.27
SYCP3-201ENST00000266743 CFAP74Q9C0B2 1584 aa16.76■□□□□ 0.27
SYCP3-201ENST00000266743 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
SYCP3-201ENST00000266743 PTPRTO14522 1441 aa16.74■□□□□ 0.27
SYCP3-201ENST00000266743 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
SYCP3-201ENST00000266743 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
SYCP3-201ENST00000266743 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
SYCP3-201ENST00000266743 PLCH2O75038 1416 aa16.73■□□□□ 0.27
SYCP3-201ENST00000266743 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
SYCP3-201ENST00000266743 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
SYCP3-201ENST00000266743 UBAP1LF5GYI3 381 aa16.69■□□□□ 0.26
SYCP3-201ENST00000266743 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
SYCP3-201ENST00000266743 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
SYCP3-201ENST00000266743 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
SYCP3-201ENST00000266743 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
SYCP3-201ENST00000266743 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SYCP3-201ENST00000266743 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
SYCP3-201ENST00000266743 TRAPPC8Q9Y2L5 1435 aa16.63■□□□□ 0.25
SYCP3-201ENST00000266743 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
SYCP3-201ENST00000266743 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
SYCP3-201ENST00000266743 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
SYCP3-201ENST00000266743 DIP2CQ9Y2E4 1556 aa16.6■□□□□ 0.25
SYCP3-201ENST00000266743 C3P01024 1663 aa16.6■□□□□ 0.25
SYCP3-201ENST00000266743 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
SYCP3-201ENST00000266743 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
SYCP3-201ENST00000266743 KIF14Q15058 1648 aa16.57■□□□□ 0.24
SYCP3-201ENST00000266743 CAMSAP1Q5T5Y3 1602 aa16.57■□□□□ 0.24
SYCP3-201ENST00000266743 KDM5CP41229 1560 aa16.57■□□□□ 0.24
SYCP3-201ENST00000266743 ARHGAP5Q13017 1502 aa16.57■□□□□ 0.24
SYCP3-201ENST00000266743 HSPA1LP34931 641 aa16.57■□□□□ 0.24
SYCP3-201ENST00000266743 PIP4K2BP78356 416 aa16.56■□□□□ 0.24
SYCP3-201ENST00000266743 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
SYCP3-201ENST00000266743 MYO5CQ9NQX4 1742 aa16.52■□□□□ 0.24
SYCP3-201ENST00000266743 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
SYCP3-201ENST00000266743 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SYCP3-201ENST00000266743 REREQ9P2R6 1566 aa16.51■□□□□ 0.23
SYCP3-201ENST00000266743 ZMYM3Q14202 1370 aa16.51■□□□□ 0.23
SYCP3-201ENST00000266743 AGLP35573 1532 aa16.5■□□□□ 0.23
SYCP3-201ENST00000266743 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
SYCP3-201ENST00000266743 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
SYCP3-201ENST00000266743 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
SYCP3-201ENST00000266743 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
SYCP3-201ENST00000266743 NPATQ14207 1427 aa16.46■□□□□ 0.23
SYCP3-201ENST00000266743 APLP2Q06481 763 aa16.46■□□□□ 0.23
SYCP3-201ENST00000266743 PKD2Q13563 968 aa16.46■□□□□ 0.23
SYCP3-201ENST00000266743 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
SYCP3-201ENST00000266743 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
SYCP3-201ENST00000266743 ABCC1P33527 1531 aa16.43■□□□□ 0.22
SYCP3-201ENST00000266743 CLIP1P30622 1438 aa16.43■□□□□ 0.22
SYCP3-201ENST00000266743 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
SYCP3-201ENST00000266743 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
SYCP3-201ENST00000266743 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
SYCP3-201ENST00000266743 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
SYCP3-201ENST00000266743 GGT6Q6P531 493 aa16.41■□□□□ 0.22
SYCP3-201ENST00000266743 PLA2R1Q13018 1463 aa16.41■□□□□ 0.22
SYCP3-201ENST00000266743 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
SYCP3-201ENST00000266743 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
SYCP3-201ENST00000266743 EEA1Q15075 1411 aa16.4■□□□□ 0.22
SYCP3-201ENST00000266743 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
SYCP3-201ENST00000266743 TOM1O60784 492 aa16.4■□□□□ 0.22
SYCP3-201ENST00000266743 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
SYCP3-201ENST00000266743 SPAG9O60271 1321 aaKnown RBP16.38■□□□□ 0.21
SYCP3-201ENST00000266743 CEP170BQ9Y4F5 1589 aaPredicted RBP16.38■□□□□ 0.21
SYCP3-201ENST00000266743 MYO3AQ8NEV4 1616 aa16.37■□□□□ 0.21
SYCP3-201ENST00000266743 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
SYCP3-201ENST00000266743 SAMD9LQ8IVG5 1584 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms