RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 KDM6BO15054 1643 aa24.38■■□□□ 1.49
CHKA-201ENST00000265689 TIMELESSQ9UNS1 1208 aa24.37■■□□□ 1.49
CHKA-201ENST00000265689 ABCC2Q92887 1545 aa24.37■■□□□ 1.49
CHKA-201ENST00000265689 CFDP1Q9UEE9 299 aaPredicted RBP24.36■■□□□ 1.49
CHKA-201ENST00000265689 ADCY10Q96PN6 1610 aa24.36■■□□□ 1.49
CHKA-201ENST00000265689 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
CHKA-201ENST00000265689 DNMT1P26358 1616 aaKnown RBP24.35■■□□□ 1.49
CHKA-201ENST00000265689 TRIM52Q96A61 297 aa24.33■■□□□ 1.49
CHKA-201ENST00000265689 ZCCHC11Q5TAX3 1644 aaKnown RBP24.32■■□□□ 1.48
CHKA-201ENST00000265689 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
CHKA-201ENST00000265689 ROCK1Q13464 1354 aa24.31■■□□□ 1.48
CHKA-201ENST00000265689 ITSN2Q9NZM3 1697 aa24.31■■□□□ 1.48
CHKA-201ENST00000265689 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
CHKA-201ENST00000265689 CDC42BPAQ5VT25 1732 aa24.3■■□□□ 1.48
CHKA-201ENST00000265689 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
CHKA-201ENST00000265689 DENND4BO75064 1496 aaPredicted RBP24.27■■□□□ 1.48
CHKA-201ENST00000265689 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
CHKA-201ENST00000265689 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
CHKA-201ENST00000265689 TTC37Q6PGP7 1564 aa24.25■■□□□ 1.47
CHKA-201ENST00000265689 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
CHKA-201ENST00000265689 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
CHKA-201ENST00000265689 KDM5BQ9UGL1 1544 aa24.19■■□□□ 1.46
CHKA-201ENST00000265689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.19■■□□□ 1.46
CHKA-201ENST00000265689 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.461e-6■■■□□ 16.5
CHKA-201ENST00000265689 CDC42BPBQ9Y5S2 1711 aa24.18■■□□□ 1.46
CHKA-201ENST00000265689 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
CHKA-201ENST00000265689 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
CHKA-201ENST00000265689 CYB5RLQ6IPT4 315 aa24.17■■□□□ 1.46
CHKA-201ENST00000265689 FOXD1Q16676 465 aa24.17■■□□□ 1.46
CHKA-201ENST00000265689 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
CHKA-201ENST00000265689 UHRF1BP1LA0JNW5 1464 aa24.16■■□□□ 1.46
CHKA-201ENST00000265689 CROCC2H7BZ55 1655 aa24.13■■□□□ 1.45
CHKA-201ENST00000265689 ADGBQ8N7X0 1667 aa24.12■■□□□ 1.45
CHKA-201ENST00000265689 HIRIP3Q9BW71 556 aaPredicted RBP24.12■■□□□ 1.45
CHKA-201ENST00000265689 ADGRL2O95490 1459 aa24.12■■□□□ 1.45
CHKA-201ENST00000265689 ANKRD30AQ9BXX3 1397 aa24.09■■□□□ 1.45
CHKA-201ENST00000265689 ARHGAP5Q13017 1502 aa24.08■■□□□ 1.45
CHKA-201ENST00000265689 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
CHKA-201ENST00000265689 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
CHKA-201ENST00000265689 PREX2Q70Z35 1606 aa24.08■■□□□ 1.44
CHKA-201ENST00000265689 ASXL2Q76L83 1435 aa24.06■■□□□ 1.44
CHKA-201ENST00000265689 ANKRD30BQ9BXX2 1392 aa24.05■■□□□ 1.44
CHKA-201ENST00000265689 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
CHKA-201ENST00000265689 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
CHKA-201ENST00000265689 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
CHKA-201ENST00000265689 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
CHKA-201ENST00000265689 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
CHKA-201ENST00000265689 PZPP20742 1482 aa24.03■■□□□ 1.44
CHKA-201ENST00000265689 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
CHKA-201ENST00000265689 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
CHKA-201ENST00000265689 SYCP2Q9BX26 1530 aa24.02■■□□□ 1.44
CHKA-201ENST00000265689 DDX10Q13206 875 aaKnown RBP24.02■■□□□ 1.44
CHKA-201ENST00000265689 TSPY4P0CV99 314 aa24.02■■□□□ 1.44
CHKA-201ENST00000265689 TSPY10P0CW01 314 aa24.02■■□□□ 1.44
CHKA-201ENST00000265689 ANKRD50Q9ULJ7 1429 aa24.01■■□□□ 1.43
CHKA-201ENST00000265689 MBD5Q9P267 1494 aa24■■□□□ 1.43
CHKA-201ENST00000265689 L3MBTL2Q969R5 705 aa23.99■■□□□ 1.43
CHKA-201ENST00000265689 NPM1P06748 294 aaKnown RBP eCLIP23.99■■□□□ 1.43
CHKA-201ENST00000265689 ARHGEF12Q9NZN5 1544 aa23.98■■□□□ 1.43
CHKA-201ENST00000265689 ARHGEF5Q12774 1597 aa23.97■■□□□ 1.43
CHKA-201ENST00000265689 RPRD2Q5VT52 1461 aaKnown RBP23.96■■□□□ 1.43
CHKA-201ENST00000265689 CCDC141Q6ZP82 1450 aa23.93■■□□□ 1.42
CHKA-201ENST00000265689 PLCH2O75038 1416 aa23.93■■□□□ 1.42
CHKA-201ENST00000265689 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
CHKA-201ENST00000265689 PKD2Q13563 968 aa23.91■■□□□ 1.42
CHKA-201ENST00000265689 AFAP1Q8N556 730 aa23.9■■□□□ 1.42
CHKA-201ENST00000265689 KIAA1107Q9UPP5 1409 aa23.9■■□□□ 1.42
CHKA-201ENST00000265689 NUP155O75694 1391 aa23.88■■□□□ 1.41
CHKA-201ENST00000265689 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
CHKA-201ENST00000265689 TEX14Q8IWB6 1497 aa23.88■■□□□ 1.41
CHKA-201ENST00000265689 TRAPPC8Q9Y2L5 1435 aa23.88■■□□□ 1.41
CHKA-201ENST00000265689 GTF3C3Q9Y5Q9 886 aa23.87■■□□□ 1.41
CHKA-201ENST00000265689 EFCAB2Q5VUJ9 269 aa23.87■■□□□ 1.41
CHKA-201ENST00000265689 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
CHKA-201ENST00000265689 NBPF8Q3BBV2 869 aa23.84■■□□□ 1.41
CHKA-201ENST00000265689 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
CHKA-201ENST00000265689 FANCAO15360 1455 aa23.83■■□□□ 1.41
CHKA-201ENST00000265689 ABCC1P33527 1531 aa23.81■■□□□ 1.4
CHKA-201ENST00000265689 KDM5DQ9BY66 1539 aa23.8■■□□□ 1.4
CHKA-201ENST00000265689 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
CHKA-201ENST00000265689 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
CHKA-201ENST00000265689 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
CHKA-201ENST00000265689 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
CHKA-201ENST00000265689 MYT1LQ9UL68 1186 aa23.76■■□□□ 1.39
CHKA-201ENST00000265689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.75■■□□□ 1.395e-7■■■□□ 15.3
CHKA-201ENST00000265689 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
CHKA-201ENST00000265689 ADGRL1O94910 1474 aa23.73■■□□□ 1.39
CHKA-201ENST00000265689 SCAPERQ9BY12 1400 aa23.73■■□□□ 1.39
CHKA-201ENST00000265689 WASHC2AQ641Q2 1341 aa23.72■■□□□ 1.39
CHKA-201ENST00000265689 ANP32CO43423 234 aa23.71■■□□□ 1.39
CHKA-201ENST00000265689 FAM135AQ9P2D6 1515 aa23.7■■□□□ 1.38
CHKA-201ENST00000265689 TSPOAP1O95153 1857 aa23.69■■□□□ 1.38
CHKA-201ENST00000265689 PLXNC1O60486 1568 aa23.69■■□□□ 1.38
CHKA-201ENST00000265689 SPAG9O60271 1321 aaKnown RBP23.69■■□□□ 1.38
CHKA-201ENST00000265689 FAM69CQ0P6D2 419 aa23.68■■□□□ 1.38
CHKA-201ENST00000265689 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
CHKA-201ENST00000265689 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
CHKA-201ENST00000265689 C11orf95C9JLR9 678 aaPredicted RBP23.66■■□□□ 1.38
CHKA-201ENST00000265689 UNC13BO14795 1591 aa23.64■■□□□ 1.37
CHKA-201ENST00000265689 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms