RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 CFAP53Q96M91 514 aa15.11■□□□□ 0.01
PKP1-201ENST00000263946 KIF3BO15066 747 aa15.11■□□□□ 0.01
PKP1-201ENST00000263946 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
PKP1-201ENST00000263946 POGKQ9P215 609 aa15.1■□□□□ 0.01
PKP1-201ENST00000263946 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
PKP1-201ENST00000263946 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
PKP1-201ENST00000263946 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
PKP1-201ENST00000263946 ZNF644Q9H582 1327 aaPredicted RBP15.09■□□□□ 0.01
PKP1-201ENST00000263946 MYOM3Q5VTT5 1437 aa15.08■□□□□ 0.01
PKP1-201ENST00000263946 ROCK2O75116 1388 aaKnown RBP15.08■□□□□ 0
PKP1-201ENST00000263946 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
PKP1-201ENST00000263946 MLECQ14165 292 aa15.07■□□□□ 0
PKP1-201ENST00000263946 NEUROD2Q15784 382 aa15.07■□□□□ 0
PKP1-201ENST00000263946 GRIN2BQ13224 1484 aa15.07■□□□□ 0
PKP1-201ENST00000263946 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
PKP1-201ENST00000263946 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
PKP1-201ENST00000263946 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
PKP1-201ENST00000263946 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
PKP1-201ENST00000263946 PPP4R2Q9NY27 417 aa15.02■□□□□ -0
PKP1-201ENST00000263946 SAFB2Q14151 953 aaKnown RBP eCLIP15.02■□□□□ -0
PKP1-201ENST00000263946 NCOA2Q15596 1464 aa15.02□□□□□ -0.01
PKP1-201ENST00000263946 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
PKP1-201ENST00000263946 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
PKP1-201ENST00000263946 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
PKP1-201ENST00000263946 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
PKP1-201ENST00000263946 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
PKP1-201ENST00000263946 KTN1Q86UP2 1357 aaKnown RBP14.99□□□□□ -0.01
PKP1-201ENST00000263946 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
PKP1-201ENST00000263946 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
PKP1-201ENST00000263946 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
PKP1-201ENST00000263946 TRIM44Q96DX7 344 aaPredicted RBP14.98□□□□□ -0.01
PKP1-201ENST00000263946 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
PKP1-201ENST00000263946 B4GALNT3Q6L9W6 998 aa14.97□□□□□ -0.01
PKP1-201ENST00000263946 STK26Q9P289 416 aa14.97□□□□□ -0.01
PKP1-201ENST00000263946 DNMBPQ6XZF7 1577 aa14.97□□□□□ -0.01
PKP1-201ENST00000263946 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
PKP1-201ENST00000263946 RALBP1Q15311 655 aa14.96□□□□□ -0.01
PKP1-201ENST00000263946 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.01
PKP1-201ENST00000263946 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
PKP1-201ENST00000263946 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
PKP1-201ENST00000263946 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
PKP1-201ENST00000263946 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
PKP1-201ENST00000263946 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
PKP1-201ENST00000263946 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
PKP1-201ENST00000263946 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
PKP1-201ENST00000263946 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
PKP1-201ENST00000263946 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
PKP1-201ENST00000263946 GOLGA6L22H0YM25 854 aa14.93□□□□□ -0.02
PKP1-201ENST00000263946 HDGFP51858 240 aaKnown RBP14.92□□□□□ -0.02
PKP1-201ENST00000263946 KIF15Q9NS87 1388 aa14.92□□□□□ -0.02
PKP1-201ENST00000263946 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
PKP1-201ENST00000263946 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
PKP1-201ENST00000263946 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
PKP1-201ENST00000263946 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
PKP1-201ENST00000263946 BECN1Q14457 450 aa14.89□□□□□ -0.03
PKP1-201ENST00000263946 NBR1Q14596 966 aa14.89□□□□□ -0.03
PKP1-201ENST00000263946 NLRP13Q86W25 1043 aa14.89□□□□□ -0.03
PKP1-201ENST00000263946 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
PKP1-201ENST00000263946 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
PKP1-201ENST00000263946 USP47Q96K76 1375 aa14.89□□□□□ -0.03
PKP1-201ENST00000263946 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
PKP1-201ENST00000263946 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
PKP1-201ENST00000263946 ZRSR1Q15695 479 aaKnown RBP14.88□□□□□ -0.03
PKP1-201ENST00000263946 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
PKP1-201ENST00000263946 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
PKP1-201ENST00000263946 NUTM2DQ5VT03 806 aaPredicted RBP14.88□□□□□ -0.03
PKP1-201ENST00000263946 CYB5RLQ6IPT4 315 aa14.88□□□□□ -0.03
PKP1-201ENST00000263946 PRG4Q92954 1404 aaPredicted RBP14.87□□□□□ -0.03
PKP1-201ENST00000263946 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
PKP1-201ENST00000263946 ARXQ96QS3 562 aa14.86□□□□□ -0.03
PKP1-201ENST00000263946 SNAPC4Q5SXM2 1469 aa14.86□□□□□ -0.03
PKP1-201ENST00000263946 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
PKP1-201ENST00000263946 TRAK1Q9UPV9 953 aa14.84□□□□□ -0.03
PKP1-201ENST00000263946 RGS3P49796 1198 aa14.83□□□□□ -0.03
PKP1-201ENST00000263946 PANK3Q9H999 370 aa14.83□□□□□ -0.04
PKP1-201ENST00000263946 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.04
PKP1-201ENST00000263946 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
PKP1-201ENST00000263946 PTMAP06454 111 aaKnown RBP14.83□□□□□ -0.04
PKP1-201ENST00000263946 LMOD2Q6P5Q4 547 aa14.83□□□□□ -0.04
PKP1-201ENST00000263946 RCAN3Q9UKA8 241 aa14.83□□□□□ -0.04
PKP1-201ENST00000263946 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
PKP1-201ENST00000263946 SOX12O15370 315 aa14.82□□□□□ -0.04
PKP1-201ENST00000263946 AFAP1Q8N556 730 aa14.82□□□□□ -0.04
PKP1-201ENST00000263946 HFM1A2PYH4 1435 aa14.82□□□□□ -0.04
PKP1-201ENST00000263946 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
PKP1-201ENST00000263946 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
PKP1-201ENST00000263946 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
PKP1-201ENST00000263946 U2AF1L5P0DN76 240 aaPredicted RBP14.81□□□□□ -0.04
PKP1-201ENST00000263946 U2AF1Q01081 240 aaKnown RBP eCLIP14.81□□□□□ -0.04
PKP1-201ENST00000263946 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
PKP1-201ENST00000263946 KIAA0586Q9BVV6 1533 aa14.81□□□□□ -0.04
PKP1-201ENST00000263946 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
PKP1-201ENST00000263946 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
PKP1-201ENST00000263946 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
PKP1-201ENST00000263946 DNTTIP2Q5QJE6 756 aaKnown RBP14.78□□□□□ -0.04
PKP1-201ENST00000263946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
PKP1-201ENST00000263946 CCDC7Q96M83 1385 aa14.77□□□□□ -0.04
PKP1-201ENST00000263946 GOLGA6L6A8MZA4 724 aa14.76□□□□□ -0.05
PKP1-201ENST00000263946 EPRSP07814 1512 aaKnown RBP14.76□□□□□ -0.05
PKP1-201ENST00000263946 WASHC2AQ641Q2 1341 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms