RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 HNRNPUQ00839 825 aaKnown RBP eCLIP22.84■■□□□ 1.25
TM9SF1-201ENST00000261789 DISP1Q96F81 1524 aa22.83■■□□□ 1.25
TM9SF1-201ENST00000261789 DAPK1P53355 1430 aa22.83■■□□□ 1.25
TM9SF1-201ENST00000261789 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
TM9SF1-201ENST00000261789 ABCC5O15440 1437 aa22.81■■□□□ 1.24
TM9SF1-201ENST00000261789 NUP153P49790 1475 aaKnown RBP22.81■■□□□ 1.24
TM9SF1-201ENST00000261789 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
TM9SF1-201ENST00000261789 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
TM9SF1-201ENST00000261789 CCDC184Q52MB2 194 aa22.79■■□□□ 1.24
TM9SF1-201ENST00000261789 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
TM9SF1-201ENST00000261789 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
TM9SF1-201ENST00000261789 ANKRD30BQ9BXX2 1392 aa22.77■■□□□ 1.24
TM9SF1-201ENST00000261789 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
TM9SF1-201ENST00000261789 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
TM9SF1-201ENST00000261789 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
TM9SF1-201ENST00000261789 IRX6P78412 446 aaPredicted RBP22.73■■□□□ 1.23
TM9SF1-201ENST00000261789 DNMT1P26358 1616 aaKnown RBP22.73■■□□□ 1.23
TM9SF1-201ENST00000261789 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
TM9SF1-201ENST00000261789 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
TM9SF1-201ENST00000261789 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
TM9SF1-201ENST00000261789 RPRD2Q5VT52 1461 aaKnown RBP22.71■■□□□ 1.23
TM9SF1-201ENST00000261789 FBLN2P98095 1184 aa22.71■■□□□ 1.23
TM9SF1-201ENST00000261789 CNTLNQ9NXG0 1405 aa22.71■■□□□ 1.23
TM9SF1-201ENST00000261789 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
TM9SF1-201ENST00000261789 CEP170Q5SW79 1584 aa22.69■■□□□ 1.22
TM9SF1-201ENST00000261789 CFDP1Q9UEE9 299 aaPredicted RBP22.69■■□□□ 1.22
TM9SF1-201ENST00000261789 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
TM9SF1-201ENST00000261789 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
TM9SF1-201ENST00000261789 TEX14Q8IWB6 1497 aa22.67■■□□□ 1.22
TM9SF1-201ENST00000261789 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
TM9SF1-201ENST00000261789 FAM9BQ8IZU0 186 aa22.66■■□□□ 1.22
TM9SF1-201ENST00000261789 PRKRIP1Q9H875 184 aaPredicted RBP22.66■■□□□ 1.22
TM9SF1-201ENST00000261789 NUP160Q12769 1436 aa22.64■■□□□ 1.21
TM9SF1-201ENST00000261789 CNGB1Q14028 1251 aaPredicted RBP22.63■■□□□ 1.21
TM9SF1-201ENST00000261789 CAMSAP2Q08AD1 1489 aa22.63■■□□□ 1.21
TM9SF1-201ENST00000261789 TROQ12816 1431 aaPredicted RBP22.63■■□□□ 1.21
TM9SF1-201ENST00000261789 KIF7Q2M1P5 1343 aa22.62■■□□□ 1.21
TM9SF1-201ENST00000261789 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
TM9SF1-201ENST00000261789 RBM19Q9Y4C8 960 aaKnown RBP22.61■■□□□ 1.21
TM9SF1-201ENST00000261789 PZPP20742 1482 aa22.61■■□□□ 1.21
TM9SF1-201ENST00000261789 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
TM9SF1-201ENST00000261789 KIF14Q15058 1648 aa22.6■■□□□ 1.21
TM9SF1-201ENST00000261789 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
TM9SF1-201ENST00000261789 SPATA31E1Q6ZUB1 1445 aa22.59■■□□□ 1.21
TM9SF1-201ENST00000261789 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
TM9SF1-201ENST00000261789 PKD2Q13563 968 aa22.56■■□□□ 1.2
TM9SF1-201ENST00000261789 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
TM9SF1-201ENST00000261789 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
TM9SF1-201ENST00000261789 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
TM9SF1-201ENST00000261789 KIAA1107Q9UPP5 1409 aa22.49■■□□□ 1.19
TM9SF1-201ENST00000261789 CHD1O14646 1710 aa22.48■■□□□ 1.19
TM9SF1-201ENST00000261789 ADGBQ8N7X0 1667 aa22.48■■□□□ 1.19
TM9SF1-201ENST00000261789 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
TM9SF1-201ENST00000261789 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
TM9SF1-201ENST00000261789 CARMIL2Q6F5E8 1435 aa22.47■■□□□ 1.19
TM9SF1-201ENST00000261789 ANKRD50Q9ULJ7 1429 aa22.46■■□□□ 1.19
TM9SF1-201ENST00000261789 USP47Q96K76 1375 aa22.46■■□□□ 1.19
TM9SF1-201ENST00000261789 ADGRL2O95490 1459 aa22.45■■□□□ 1.18
TM9SF1-201ENST00000261789 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
TM9SF1-201ENST00000261789 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
TM9SF1-201ENST00000261789 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
TM9SF1-201ENST00000261789 ADCY10Q96PN6 1610 aa22.44■■□□□ 1.18
TM9SF1-201ENST00000261789 NUP155O75694 1391 aa22.43■■□□□ 1.18
TM9SF1-201ENST00000261789 BCORL1Q5H9F3 1711 aa22.43■■□□□ 1.18
TM9SF1-201ENST00000261789 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
TM9SF1-201ENST00000261789 ZBED9Q6R2W3 1325 aa22.43■■□□□ 1.18
TM9SF1-201ENST00000261789 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.18
TM9SF1-201ENST00000261789 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
TM9SF1-201ENST00000261789 DHX29Q7Z478 1369 aaKnown RBP22.4■■□□□ 1.18
TM9SF1-201ENST00000261789 ATP10BO94823 1461 aa22.4■■□□□ 1.18
TM9SF1-201ENST00000261789 CDC42BPAQ5VT25 1732 aa22.4■■□□□ 1.18
TM9SF1-201ENST00000261789 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
TM9SF1-201ENST00000261789 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
TM9SF1-201ENST00000261789 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
TM9SF1-201ENST00000261789 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
TM9SF1-201ENST00000261789 B4GALNT3Q6L9W6 998 aa22.35■■□□□ 1.17
TM9SF1-201ENST00000261789 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
TM9SF1-201ENST00000261789 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
TM9SF1-201ENST00000261789 ABCA8O94911 1581 aa22.34■■□□□ 1.17
TM9SF1-201ENST00000261789 KDM5CP41229 1560 aa22.33■■□□□ 1.17
TM9SF1-201ENST00000261789 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
TM9SF1-201ENST00000261789 MSH5O43196 834 aa22.31■■□□□ 1.16
TM9SF1-201ENST00000261789 DCAF11Q8TEB1 546 aa22.31■■□□□ 1.16
TM9SF1-201ENST00000261789 KIF15Q9NS87 1388 aa22.3■■□□□ 1.16
TM9SF1-201ENST00000261789 ST20-MTHFSA0A0A6YYL1 179 aa22.3■■□□□ 1.16
TM9SF1-201ENST00000261789 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
TM9SF1-201ENST00000261789 SHANK2Q9UPX8 1470 aa22.27■■□□□ 1.15
TM9SF1-201ENST00000261789 UHRF1BP1Q6BDS2 1440 aa22.26■■□□□ 1.15
TM9SF1-201ENST00000261789 RALGAPBQ86X10 1494 aa22.26■■□□□ 1.15
TM9SF1-201ENST00000261789 PTPRGP23470 1445 aa22.23■■□□□ 1.15
TM9SF1-201ENST00000261789 TMC1Q8TDI8 760 aa22.22■■□□□ 1.15
TM9SF1-201ENST00000261789 ARID4BQ4LE39 1312 aaPredicted RBP22.22■■□□□ 1.15
TM9SF1-201ENST00000261789 CLASP1Q7Z460 1538 aa22.22■■□□□ 1.15
TM9SF1-201ENST00000261789 PNISRQ8TF01 805 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-201ENST00000261789 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
TM9SF1-201ENST00000261789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
TM9SF1-201ENST00000261789 KDM5DQ9BY66 1539 aa22.19■■□□□ 1.14
TM9SF1-201ENST00000261789 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
TM9SF1-201ENST00000261789 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
TM9SF1-201ENST00000261789 ARHGEF12Q9NZN5 1544 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms