RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-201ENST00000261646 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
SREBF1-201ENST00000261646 PRKCSHP14314 528 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-201ENST00000261646 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-201ENST00000261646 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
SREBF1-201ENST00000261646 NCLP19338 710 aaKnown RBP20.94■□□□□ 0.94
SREBF1-201ENST00000261646 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
SREBF1-201ENST00000261646 GOLGA6L22H0YM25 854 aa20.93■□□□□ 0.94
SREBF1-201ENST00000261646 PLIN1O60240 522 aa20.93■□□□□ 0.94
SREBF1-201ENST00000261646 PRXQ9BXM0 1461 aa20.92■□□□□ 0.94
SREBF1-201ENST00000261646 RRP1P56182 461 aaKnown RBP20.9■□□□□ 0.94
SREBF1-201ENST00000261646 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
SREBF1-201ENST00000261646 WASHC2AQ641Q2 1341 aa20.89■□□□□ 0.93
SREBF1-201ENST00000261646 RALBP1Q15311 655 aa20.89■□□□□ 0.93
SREBF1-201ENST00000261646 SLC24A1O60721 1099 aa20.86■□□□□ 0.93
SREBF1-201ENST00000261646 ZNF644Q9H582 1327 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-201ENST00000261646 KTN1Q86UP2 1357 aaKnown RBP20.86■□□□□ 0.93
SREBF1-201ENST00000261646 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
SREBF1-201ENST00000261646 LRRC9Q6ZRR7 1453 aa20.85■□□□□ 0.93
SREBF1-201ENST00000261646 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
SREBF1-201ENST00000261646 CCDC184Q52MB2 194 aa20.85■□□□□ 0.93
SREBF1-201ENST00000261646 CCDC18Q5T9S5 1454 aa20.84■□□□□ 0.93
SREBF1-201ENST00000261646 PDE3BQ13370 1112 aa20.83■□□□□ 0.93
SREBF1-201ENST00000261646 NLRP13Q86W25 1043 aa20.83■□□□□ 0.93
SREBF1-201ENST00000261646 BRPF3Q9ULD4 1205 aa20.83■□□□□ 0.92
SREBF1-201ENST00000261646 NCAPD3P42695 1498 aa20.83■□□□□ 0.92
SREBF1-201ENST00000261646 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
SREBF1-201ENST00000261646 CUX1P39880 1505 aa20.82■□□□□ 0.92
SREBF1-201ENST00000261646 MS4A1P11836 297 aa20.81■□□□□ 0.92
SREBF1-201ENST00000261646 CDCA8Q53HL2 280 aa20.8■□□□□ 0.92
SREBF1-201ENST00000261646 NFKBIBQ15653 356 aa20.8■□□□□ 0.92
SREBF1-201ENST00000261646 CRBNQ96SW2 442 aa20.8■□□□□ 0.92
SREBF1-201ENST00000261646 TMF1P82094 1093 aa20.79■□□□□ 0.92
SREBF1-201ENST00000261646 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-201ENST00000261646 HSP90AB1P08238 724 aaKnown RBP20.79■□□□□ 0.92
SREBF1-201ENST00000261646 NUP155O75694 1391 aa20.78■□□□□ 0.92
SREBF1-201ENST00000261646 CCDC7Q96M83 1385 aa20.78■□□□□ 0.92
SREBF1-201ENST00000261646 GOLGA6L3A6NEY3 463 aa20.78■□□□□ 0.92
SREBF1-201ENST00000261646 PTMAP06454 111 aaKnown RBP20.78■□□□□ 0.92
SREBF1-201ENST00000261646 HNRNPMP52272 730 aaKnown RBP eCLIP20.78■□□□□ 0.928e-8■■□□□ 12.4
SREBF1-201ENST00000261646 HSCBQ8IWL3 235 aa20.77■□□□□ 0.92
SREBF1-201ENST00000261646 FGD6Q6ZV73 1430 aa20.77■□□□□ 0.92
SREBF1-201ENST00000261646 FAM161AQ3B820 660 aa20.77■□□□□ 0.91
SREBF1-201ENST00000261646 DNTTIP2Q5QJE6 756 aaKnown RBP20.77■□□□□ 0.91
SREBF1-201ENST00000261646 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
SREBF1-201ENST00000261646 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
SREBF1-201ENST00000261646 MYH16Q9H6N6 1097 aa20.75■□□□□ 0.91
SREBF1-201ENST00000261646 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
SREBF1-201ENST00000261646 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
SREBF1-201ENST00000261646 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
SREBF1-201ENST00000261646 CFTRP13569 1480 aa20.74■□□□□ 0.91
SREBF1-201ENST00000261646 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
SREBF1-201ENST00000261646 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
SREBF1-201ENST00000261646 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
SREBF1-201ENST00000261646 CNTLNQ9NXG0 1405 aa20.74■□□□□ 0.91
SREBF1-201ENST00000261646 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
SREBF1-201ENST00000261646 MYBBP1AQ9BQG0 1328 aaKnown RBP20.73■□□□□ 0.91
SREBF1-201ENST00000261646 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
SREBF1-201ENST00000261646 HSP90AA2PQ14568 343 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-201ENST00000261646 CENPQQ7L2Z9 268 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-201ENST00000261646 MSNP26038 577 aaKnown RBP20.7■□□□□ 0.9
SREBF1-201ENST00000261646 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
SREBF1-201ENST00000261646 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
SREBF1-201ENST00000261646 NESP48681 1621 aa20.7■□□□□ 0.9
SREBF1-201ENST00000261646 KIF15Q9NS87 1388 aa20.69■□□□□ 0.9
SREBF1-201ENST00000261646 TPRNQ4KMQ1 711 aa20.68■□□□□ 0.9
SREBF1-201ENST00000261646 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
SREBF1-201ENST00000261646 ARID3AQ99856 593 aa20.66■□□□□ 0.9
SREBF1-201ENST00000261646 UACAQ9BZF9 1416 aa20.66■□□□□ 0.9
SREBF1-201ENST00000261646 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
SREBF1-201ENST00000261646 USP47Q96K76 1375 aa20.65■□□□□ 0.9
SREBF1-201ENST00000261646 CCDC146Q8IYE0 955 aa20.64■□□□□ 0.9
SREBF1-201ENST00000261646 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.89
SREBF1-201ENST00000261646 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
SREBF1-201ENST00000261646 CLUAP1Q96AJ1 413 aa20.63■□□□□ 0.89
SREBF1-201ENST00000261646 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
SREBF1-201ENST00000261646 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
SREBF1-201ENST00000261646 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
SREBF1-201ENST00000261646 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
SREBF1-201ENST00000261646 MYOM3Q5VTT5 1437 aa20.62■□□□□ 0.89
SREBF1-201ENST00000261646 FRAT2O75474 233 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-201ENST00000261646 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
SREBF1-201ENST00000261646 NBPF8Q3BBV2 869 aa20.6■□□□□ 0.89
SREBF1-201ENST00000261646 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.892e-8■■■■■ 30.6
SREBF1-201ENST00000261646 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
SREBF1-201ENST00000261646 CDCA7LQ96GN5 454 aa20.6■□□□□ 0.89
SREBF1-201ENST00000261646 RWDD1Q9H446 243 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-201ENST00000261646 CASKIN1Q8WXD9 1431 aa20.59■□□□□ 0.89
SREBF1-201ENST00000261646 GBP4Q96PP9 640 aa20.59■□□□□ 0.89
SREBF1-201ENST00000261646 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
SREBF1-201ENST00000261646 PLCB2Q00722 1185 aa20.59■□□□□ 0.89
SREBF1-201ENST00000261646 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
SREBF1-201ENST00000261646 PANK3Q9H999 370 aa20.56■□□□□ 0.88
SREBF1-201ENST00000261646 U2SURPO15042 1029 aaKnown RBP20.56■□□□□ 0.88
SREBF1-201ENST00000261646 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
SREBF1-201ENST00000261646 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
SREBF1-201ENST00000261646 PMFBP1Q8TBY8 1022 aa20.55■□□□□ 0.88
SREBF1-201ENST00000261646 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-201ENST00000261646 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
SREBF1-201ENST00000261646 FOXD4L1Q9NU39 408 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms