RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 DAPK1P53355 1430 aa15.99■□□□□ 0.15
SLC3A1-201ENST00000260649 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
SLC3A1-201ENST00000260649 L3MBTL2Q969R5 705 aa15.99■□□□□ 0.15
SLC3A1-201ENST00000260649 ABCC5O15440 1437 aa15.98■□□□□ 0.15
SLC3A1-201ENST00000260649 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
SLC3A1-201ENST00000260649 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
SLC3A1-201ENST00000260649 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
SLC3A1-201ENST00000260649 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
SLC3A1-201ENST00000260649 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
SLC3A1-201ENST00000260649 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
SLC3A1-201ENST00000260649 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
SLC3A1-201ENST00000260649 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
SLC3A1-201ENST00000260649 BCANQ96GW7 911 aa15.93■□□□□ 0.14
SLC3A1-201ENST00000260649 KDM5BQ9UGL1 1544 aa15.92■□□□□ 0.14
SLC3A1-201ENST00000260649 KIF14Q15058 1648 aa15.92■□□□□ 0.14
SLC3A1-201ENST00000260649 CNGB1Q14028 1251 aaPredicted RBP15.9■□□□□ 0.14
SLC3A1-201ENST00000260649 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
SLC3A1-201ENST00000260649 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
SLC3A1-201ENST00000260649 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
SLC3A1-201ENST00000260649 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
SLC3A1-201ENST00000260649 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
SLC3A1-201ENST00000260649 WASHC2AQ641Q2 1341 aa15.89■□□□□ 0.13
SLC3A1-201ENST00000260649 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
SLC3A1-201ENST00000260649 NUP160Q12769 1436 aa15.88■□□□□ 0.13
SLC3A1-201ENST00000260649 ROCK1Q13464 1354 aa15.87■□□□□ 0.13
SLC3A1-201ENST00000260649 ANKRD30BQ9BXX2 1392 aa15.86■□□□□ 0.13
SLC3A1-201ENST00000260649 C11orf95C9JLR9 678 aaPredicted RBP15.86■□□□□ 0.13
SLC3A1-201ENST00000260649 HNRNPMP52272 730 aaKnown RBP eCLIP15.86■□□□□ 0.13
SLC3A1-201ENST00000260649 POLR3GLQ9BT43 218 aa15.86■□□□□ 0.13
SLC3A1-201ENST00000260649 PKD2Q13563 968 aa15.85■□□□□ 0.13
SLC3A1-201ENST00000260649 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
SLC3A1-201ENST00000260649 NCOA1Q15788 1441 aa15.83■□□□□ 0.13
SLC3A1-201ENST00000260649 ATP10BO94823 1461 aa15.83■□□□□ 0.12
SLC3A1-201ENST00000260649 FKBP8Q14318 412 aa15.83■□□□□ 0.12
SLC3A1-201ENST00000260649 PTPRGP23470 1445 aa15.81■□□□□ 0.12
SLC3A1-201ENST00000260649 TSPY4P0CV99 314 aa15.8■□□□□ 0.12
SLC3A1-201ENST00000260649 TSPY10P0CW01 314 aa15.8■□□□□ 0.12
SLC3A1-201ENST00000260649 ANKRD30AQ9BXX3 1397 aa15.8■□□□□ 0.12
SLC3A1-201ENST00000260649 RPRD2Q5VT52 1461 aaKnown RBP15.79■□□□□ 0.12
SLC3A1-201ENST00000260649 PZPP20742 1482 aa15.79■□□□□ 0.12
SLC3A1-201ENST00000260649 HNRNPUQ00839 825 aaKnown RBP eCLIP15.78■□□□□ 0.12
SLC3A1-201ENST00000260649 ITSN2Q9NZM3 1697 aa15.78■□□□□ 0.12
SLC3A1-201ENST00000260649 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
SLC3A1-201ENST00000260649 NUP155O75694 1391 aa15.77■□□□□ 0.12
SLC3A1-201ENST00000260649 KDM2AQ9Y2K7 1162 aa15.77■□□□□ 0.12
SLC3A1-201ENST00000260649 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.11
SLC3A1-201ENST00000260649 ABCA8O94911 1581 aa15.76■□□□□ 0.11
SLC3A1-201ENST00000260649 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
SLC3A1-201ENST00000260649 C9orf84Q5VXU9 1444 aa15.74■□□□□ 0.11
SLC3A1-201ENST00000260649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
SLC3A1-201ENST00000260649 CCDC7Q96M83 1385 aa15.73■□□□□ 0.11
SLC3A1-201ENST00000260649 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
SLC3A1-201ENST00000260649 CDC42BPAQ5VT25 1732 aa15.73■□□□□ 0.11
SLC3A1-201ENST00000260649 ABCC10Q5T3U5 1492 aa15.72■□□□□ 0.11
SLC3A1-201ENST00000260649 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
SLC3A1-201ENST00000260649 KIAA1107Q9UPP5 1409 aa15.72■□□□□ 0.11
SLC3A1-201ENST00000260649 NEFLP07196 543 aa15.72■□□□□ 0.11
SLC3A1-201ENST00000260649 KIF7Q2M1P5 1343 aa15.71■□□□□ 0.11
SLC3A1-201ENST00000260649 KIF15Q9NS87 1388 aa15.7■□□□□ 0.1
SLC3A1-201ENST00000260649 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
SLC3A1-201ENST00000260649 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
SLC3A1-201ENST00000260649 IRX6P78412 446 aaPredicted RBP15.69■□□□□ 0.1
SLC3A1-201ENST00000260649 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
SLC3A1-201ENST00000260649 ADGRL2O95490 1459 aa15.69■□□□□ 0.1
SLC3A1-201ENST00000260649 CHD1O14646 1710 aa15.68■□□□□ 0.1
SLC3A1-201ENST00000260649 MRS2Q9HD23 443 aa15.68■□□□□ 0.1
SLC3A1-201ENST00000260649 CROCC2H7BZ55 1655 aa15.68■□□□□ 0.1
SLC3A1-201ENST00000260649 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
SLC3A1-201ENST00000260649 ERCC6L2Q5T890 1561 aa15.67■□□□□ 0.1
SLC3A1-201ENST00000260649 RGL3Q3MIN7 710 aa15.66■□□□□ 0.1
SLC3A1-201ENST00000260649 DCAF11Q8TEB1 546 aa15.66■□□□□ 0.1
SLC3A1-201ENST00000260649 USP47Q96K76 1375 aa15.65■□□□□ 0.1
SLC3A1-201ENST00000260649 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
SLC3A1-201ENST00000260649 SPATA31E1Q6ZUB1 1445 aa15.63■□□□□ 0.09
SLC3A1-201ENST00000260649 ARHGAP5Q13017 1502 aa15.62■□□□□ 0.09
SLC3A1-201ENST00000260649 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
SLC3A1-201ENST00000260649 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
SLC3A1-201ENST00000260649 SAMD9LQ8IVG5 1584 aa15.6■□□□□ 0.09
SLC3A1-201ENST00000260649 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
SLC3A1-201ENST00000260649 SYCP2Q9BX26 1530 aa15.59■□□□□ 0.09
SLC3A1-201ENST00000260649 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
SLC3A1-201ENST00000260649 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
SLC3A1-201ENST00000260649 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
SLC3A1-201ENST00000260649 TTC37Q6PGP7 1564 aa15.57■□□□□ 0.08
SLC3A1-201ENST00000260649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
SLC3A1-201ENST00000260649 BCORL1Q5H9F3 1711 aa15.54■□□□□ 0.08
SLC3A1-201ENST00000260649 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
SLC3A1-201ENST00000260649 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
SLC3A1-201ENST00000260649 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
SLC3A1-201ENST00000260649 NBPF1Q3BBV0 1214 aa15.52■□□□□ 0.08
SLC3A1-201ENST00000260649 ARHGEF5Q12774 1597 aa15.52■□□□□ 0.08
SLC3A1-201ENST00000260649 ROCK2O75116 1388 aaKnown RBP15.52■□□□□ 0.07
SLC3A1-201ENST00000260649 PLEKHH2Q8IVE3 1493 aa15.52■□□□□ 0.07
SLC3A1-201ENST00000260649 FAM135AQ9P2D6 1515 aa15.52■□□□□ 0.07
SLC3A1-201ENST00000260649 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
SLC3A1-201ENST00000260649 ABCC2Q92887 1545 aa15.5■□□□□ 0.07
SLC3A1-201ENST00000260649 EFCAB2Q5VUJ9 269 aa15.49■□□□□ 0.07
SLC3A1-201ENST00000260649 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
SLC3A1-201ENST00000260649 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
SLC3A1-201ENST00000260649 ARHGEF12Q9NZN5 1544 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms