RNA–Protein interactions for RNA: ENST00000257879.10

ITGA7-201, Transcript of integrin subunit alpha 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGA7, Length 4,120 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-201ENST00000257879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
ITGA7-201ENST00000257879 PDS5BQ9NTI5 1447 aa23.45■■□□□ 1.34
ITGA7-201ENST00000257879 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
ITGA7-201ENST00000257879 UPF2Q9HAU5 1272 aaKnown RBP23.43■■□□□ 1.34
ITGA7-201ENST00000257879 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
ITGA7-201ENST00000257879 LAS1LQ9Y4W2 734 aaKnown RBP23.43■■□□□ 1.34
ITGA7-201ENST00000257879 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
ITGA7-201ENST00000257879 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
ITGA7-201ENST00000257879 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
ITGA7-201ENST00000257879 RGL3Q3MIN7 710 aa23.4■■□□□ 1.34
ITGA7-201ENST00000257879 NAIPQ13075 1403 aa23.4■■□□□ 1.34
ITGA7-201ENST00000257879 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.34
ITGA7-201ENST00000257879 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.33
ITGA7-201ENST00000257879 KTN1Q86UP2 1357 aaKnown RBP23.38■■□□□ 1.33
ITGA7-201ENST00000257879 KIF15Q9NS87 1388 aa23.36■■□□□ 1.33
ITGA7-201ENST00000257879 ARID4BQ4LE39 1312 aaPredicted RBP23.36■■□□□ 1.33
ITGA7-201ENST00000257879 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
ITGA7-201ENST00000257879 NLRP13Q86W25 1043 aa23.35■■□□□ 1.33
ITGA7-201ENST00000257879 KNSTRNQ9Y448 316 aa23.35■■□□□ 1.33
ITGA7-201ENST00000257879 USP47Q96K76 1375 aa23.34■■□□□ 1.33
ITGA7-201ENST00000257879 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
ITGA7-201ENST00000257879 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
ITGA7-201ENST00000257879 NUP155O75694 1391 aa23.32■■□□□ 1.32
ITGA7-201ENST00000257879 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
ITGA7-201ENST00000257879 EIF5BO60841 1220 aaKnown RBP23.32■■□□□ 1.32
ITGA7-201ENST00000257879 MSH5O43196 834 aa23.3■■□□□ 1.32
ITGA7-201ENST00000257879 TMF1P82094 1093 aa23.29■■□□□ 1.32
ITGA7-201ENST00000257879 BECN1Q14457 450 aa23.29■■□□□ 1.32
ITGA7-201ENST00000257879 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
ITGA7-201ENST00000257879 USP35Q9P2H5 1018 aa23.29■■□□□ 1.32
ITGA7-201ENST00000257879 MIA2Q96PC5 1412 aa23.27■■□□□ 1.32
ITGA7-201ENST00000257879 RRP1P56182 461 aaKnown RBP23.26■■□□□ 1.31
ITGA7-201ENST00000257879 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
ITGA7-201ENST00000257879 MS4A1P11836 297 aa23.23■■□□□ 1.31
ITGA7-201ENST00000257879 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
ITGA7-201ENST00000257879 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
ITGA7-201ENST00000257879 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
ITGA7-201ENST00000257879 SUPT6HQ7KZ85 1726 aaKnown RBP23.22■■□□□ 1.31
ITGA7-201ENST00000257879 PDE4AP27815 886 aa23.22■■□□□ 1.31
ITGA7-201ENST00000257879 NBPF8Q3BBV2 869 aa23.21■■□□□ 1.31
ITGA7-201ENST00000257879 SMG6Q86US8 1419 aaKnown RBP23.21■■□□□ 1.31
ITGA7-201ENST00000257879 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
ITGA7-201ENST00000257879 EXOC6Q8TAG9 804 aa23.18■■□□□ 1.3
ITGA7-201ENST00000257879 PTPN23Q9H3S7 1636 aa23.18■■□□□ 1.3
ITGA7-201ENST00000257879 RGS3P49796 1198 aa23.18■■□□□ 1.3
ITGA7-201ENST00000257879 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
ITGA7-201ENST00000257879 CARMIL2Q6F5E8 1435 aa23.17■■□□□ 1.3
ITGA7-201ENST00000257879 RTN4Q9NQC3 1192 aaKnown RBP23.17■■□□□ 1.3
ITGA7-201ENST00000257879 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
ITGA7-201ENST00000257879 NCOA1Q15788 1441 aa23.14■■□□□ 1.29
ITGA7-201ENST00000257879 SLC24A1O60721 1099 aa23.14■■□□□ 1.29
ITGA7-201ENST00000257879 CUL7Q14999 1698 aa23.13■■□□□ 1.29
ITGA7-201ENST00000257879 ZNF644Q9H582 1327 aaPredicted RBP23.11■■□□□ 1.29
ITGA7-201ENST00000257879 AKNAQ7Z591 1439 aa23.11■■□□□ 1.29
ITGA7-201ENST00000257879 C11orf95C9JLR9 678 aaPredicted RBP23.1■■□□□ 1.29
ITGA7-201ENST00000257879 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
ITGA7-201ENST00000257879 ROCK1Q13464 1354 aa23.1■■□□□ 1.29
ITGA7-201ENST00000257879 CFAP43Q8NDM7 1665 aa23.09■■□□□ 1.29
ITGA7-201ENST00000257879 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
ITGA7-201ENST00000257879 RSPH4AQ5TD94 716 aa23.08■■□□□ 1.29
ITGA7-201ENST00000257879 ANKRD30BQ9BXX2 1392 aa23.08■■□□□ 1.28
ITGA7-201ENST00000257879 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
ITGA7-201ENST00000257879 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
ITGA7-201ENST00000257879 HECW1Q76N89 1606 aa23.06■■□□□ 1.28
ITGA7-201ENST00000257879 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
ITGA7-201ENST00000257879 CHGAP10645 457 aaKnown RBP23.03■■□□□ 1.28
ITGA7-201ENST00000257879 CENPQQ7L2Z9 268 aaPredicted RBP23.03■■□□□ 1.28
ITGA7-201ENST00000257879 KIAA1107Q9UPP5 1409 aa23.03■■□□□ 1.28
ITGA7-201ENST00000257879 HSP90AA1P07900 732 aaKnown RBP23.03■■□□□ 1.28
ITGA7-201ENST00000257879 DAPK1P53355 1430 aa23.03■■□□□ 1.28
ITGA7-201ENST00000257879 ANKRD50Q9ULJ7 1429 aa23.01■■□□□ 1.27
ITGA7-201ENST00000257879 CCDC144AA2RUR9 1427 aa23■■□□□ 1.27
ITGA7-201ENST00000257879 EPRSP07814 1512 aaKnown RBP23■■□□□ 1.27
ITGA7-201ENST00000257879 RPRD2Q5VT52 1461 aaKnown RBP23■■□□□ 1.27
ITGA7-201ENST00000257879 ANP32BQ92688 251 aaKnown RBP23■■□□□ 1.27
ITGA7-201ENST00000257879 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
ITGA7-201ENST00000257879 CRBNQ96SW2 442 aa22.99■■□□□ 1.27
ITGA7-201ENST00000257879 GLIPR1L2Q4G1C9 344 aa22.99■■□□□ 1.27
ITGA7-201ENST00000257879 PANK3Q9H999 370 aa22.98■■□□□ 1.27
ITGA7-201ENST00000257879 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
ITGA7-201ENST00000257879 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
ITGA7-201ENST00000257879 PLIN1O60240 522 aa22.97■■□□□ 1.27
ITGA7-201ENST00000257879 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
ITGA7-201ENST00000257879 WASHC2CQ9Y4E1 1318 aa22.94■■□□□ 1.26
ITGA7-201ENST00000257879 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
ITGA7-201ENST00000257879 NESP48681 1621 aa22.94■■□□□ 1.26
ITGA7-201ENST00000257879 GSE1Q14687 1217 aa22.93■■□□□ 1.26
ITGA7-201ENST00000257879 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
ITGA7-201ENST00000257879 ARXQ96QS3 562 aa22.93■■□□□ 1.26
ITGA7-201ENST00000257879 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
ITGA7-201ENST00000257879 L1TD1Q5T7N2 865 aaKnown RBP22.92■■□□□ 1.26
ITGA7-201ENST00000257879 BACH2Q9BYV9 841 aa22.91■■□□□ 1.26
ITGA7-201ENST00000257879 UGGT2Q9NYU1 1516 aa22.9■■□□□ 1.26
ITGA7-201ENST00000257879 NEUROD2Q15784 382 aa22.9■■□□□ 1.26
ITGA7-201ENST00000257879 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.25
ITGA7-201ENST00000257879 FTSJ3Q8IY81 847 aaKnown RBP22.89■■□□□ 1.25
ITGA7-201ENST00000257879 ABCC5O15440 1437 aa22.87■■□□□ 1.25
ITGA7-201ENST00000257879 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
ITGA7-201ENST00000257879 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
ITGA7-201ENST00000257879 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms