RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 TROQ12816 1431 aaPredicted RBP34.75■■■■□ 3.15
LMO2-201ENST00000257818 TRIM52Q96A61 297 aa34.75■■■■□ 3.15
LMO2-201ENST00000257818 NAIPQ13075 1403 aa34.75■■■■□ 3.15
LMO2-201ENST00000257818 TONSLQ96HA7 1378 aa34.74■■■■□ 3.15
LMO2-201ENST00000257818 UACAQ9BZF9 1416 aa34.71■■■■□ 3.15
LMO2-201ENST00000257818 RRP7BPQ9NSQ0 103 aa34.69■■■■□ 3.14
LMO2-201ENST00000257818 PTPRGP23470 1445 aa34.68■■■■□ 3.14
LMO2-201ENST00000257818 NEFLP07196 543 aa34.66■■■■□ 3.14
LMO2-201ENST00000257818 ZNF644Q9H582 1327 aaPredicted RBP34.65■■■■□ 3.14
LMO2-201ENST00000257818 KIF14Q15058 1648 aa34.65■■■■□ 3.14
LMO2-201ENST00000257818 ATP10BO94823 1461 aa34.65■■■■□ 3.14
LMO2-201ENST00000257818 SHROOM2Q13796 1616 aa34.62■■■■□ 3.13
LMO2-201ENST00000257818 ADCY10Q96PN6 1610 aa34.6■■■■□ 3.13
LMO2-201ENST00000257818 PLEKHD1A6NEE1 506 aa34.59■■■■□ 3.13
LMO2-201ENST00000257818 KDM5BQ9UGL1 1544 aa34.58■■■■□ 3.13
LMO2-201ENST00000257818 GCC2Q8IWJ2 1684 aa34.56■■■■□ 3.12
LMO2-201ENST00000257818 DAPK1P53355 1430 aa34.55■■■■□ 3.12
LMO2-201ENST00000257818 GPATCH8Q9UKJ3 1502 aaKnown RBP34.55■■■■□ 3.12
LMO2-201ENST00000257818 CFDP1Q9UEE9 299 aaPredicted RBP34.55■■■■□ 3.12
LMO2-201ENST00000257818 ERCC6L2Q5T890 1561 aa34.54■■■■□ 3.12
LMO2-201ENST00000257818 ITSN2Q9NZM3 1697 aa34.53■■■■□ 3.12
LMO2-201ENST00000257818 ABCC5O15440 1437 aa34.52■■■■□ 3.12
LMO2-201ENST00000257818 DNMT1P26358 1616 aaKnown RBP34.52■■■■□ 3.12
LMO2-201ENST00000257818 AKNAQ7Z591 1439 aa34.51■■■■□ 3.12
LMO2-201ENST00000257818 KDM6BO15054 1643 aa34.5■■■■□ 3.11
LMO2-201ENST00000257818 RBM19Q9Y4C8 960 aaKnown RBP34.49■■■■□ 3.11
LMO2-201ENST00000257818 ZNF777Q9ULD5 760 aaPredicted RBP34.48■■■■□ 3.11
LMO2-201ENST00000257818 CAMSAP2Q08AD1 1489 aa34.48■■■■□ 3.11
LMO2-201ENST00000257818 CLASP1Q7Z460 1538 aa34.43■■■■□ 3.1
LMO2-201ENST00000257818 ABCC10Q5T3U5 1492 aa34.42■■■■□ 3.1
LMO2-201ENST00000257818 ROCK1Q13464 1354 aa34.41■■■■□ 3.1
LMO2-201ENST00000257818 CDC42BPAQ5VT25 1732 aa34.4■■■■□ 3.1
LMO2-201ENST00000257818 DENND4BO75064 1496 aaPredicted RBP34.35■■■■□ 3.09
LMO2-201ENST00000257818 WASHC2AQ641Q2 1341 aa34.33■■■■□ 3.09
LMO2-201ENST00000257818 HNRNPUQ00839 825 aaKnown RBP eCLIP34.32■■■■□ 3.08
LMO2-201ENST00000257818 HSPA5P11021 654 aaKnown RBP34.3■■■■□ 3.08
LMO2-201ENST00000257818 ABCC2Q92887 1545 aa34.29■■■■□ 3.08
LMO2-201ENST00000257818 MPHOSPH9Q99550 1183 aa34.25■■■■□ 3.07
LMO2-201ENST00000257818 CROCC2H7BZ55 1655 aa34.25■■■■□ 3.07
LMO2-201ENST00000257818 NCOA1Q15788 1441 aa34.23■■■■□ 3.07
LMO2-201ENST00000257818 ADGBQ8N7X0 1667 aa34.23■■■■□ 3.07
LMO2-201ENST00000257818 FOXD1Q16676 465 aa34.16■■■■□ 3.06
LMO2-201ENST00000257818 ADGRL2O95490 1459 aa34.16■■■■□ 3.06
LMO2-201ENST00000257818 CDC42BPBQ9Y5S2 1711 aa34.16■■■■□ 3.06
LMO2-201ENST00000257818 IRX6P78412 446 aaPredicted RBP34.15■■■■□ 3.06
LMO2-201ENST00000257818 EIF4G2P78344 907 aaKnown RBP eCLIP34.15■■■■□ 3.06
LMO2-201ENST00000257818 HNRNPMP52272 730 aaKnown RBP eCLIP34.14■■■■□ 3.06
LMO2-201ENST00000257818 CNTLNQ9NXG0 1405 aa34.14■■■■□ 3.06
LMO2-201ENST00000257818 PREX2Q70Z35 1606 aa34.13■■■■□ 3.05
LMO2-201ENST00000257818 ANKRD30AQ9BXX3 1397 aa34.13■■■■□ 3.05
LMO2-201ENST00000257818 TTC37Q6PGP7 1564 aa34.12■■■■□ 3.05
LMO2-201ENST00000257818 CCDC184Q52MB2 194 aa34.1■■■■□ 3.05
LMO2-201ENST00000257818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.1■■■■□ 3.05
LMO2-201ENST00000257818 ZCCHC11Q5TAX3 1644 aaKnown RBP34.1■■■■□ 3.05
LMO2-201ENST00000257818 MSH5O43196 834 aa34.09■■■■□ 3.05
LMO2-201ENST00000257818 C9orf84Q5VXU9 1444 aa34.09■■■■□ 3.05
LMO2-201ENST00000257818 SAMD9LQ8IVG5 1584 aa34.09■■■■□ 3.05
LMO2-201ENST00000257818 UHRF1BP1LA0JNW5 1464 aa34.08■■■■□ 3.05
LMO2-201ENST00000257818 L3MBTL2Q969R5 705 aa34.07■■■■□ 3.05
LMO2-201ENST00000257818 TSPY4P0CV99 314 aa34.06■■■■□ 3.04
LMO2-201ENST00000257818 TSPY10P0CW01 314 aa34.06■■■■□ 3.04
LMO2-201ENST00000257818 SLC4A1APQ9BWU0 796 aaKnown RBP34.06■■■■□ 3.04
LMO2-201ENST00000257818 SHANK2Q9UPX8 1470 aa34.06■■■■□ 3.04
LMO2-201ENST00000257818 C11orf95C9JLR9 678 aaPredicted RBP34.06■■■■□ 3.04
LMO2-201ENST00000257818 MBD5Q9P267 1494 aa34.05■■■■□ 3.04
LMO2-201ENST00000257818 ARHGEF5Q12774 1597 aa34.03■■■■□ 3.04
LMO2-201ENST00000257818 ARHGAP5Q13017 1502 aa34.01■■■■□ 3.04
LMO2-201ENST00000257818 CCDC7Q96M83 1385 aa34.01■■■■□ 3.04
LMO2-201ENST00000257818 ANKRD50Q9ULJ7 1429 aa34.01■■■■□ 3.03
LMO2-201ENST00000257818 PZPP20742 1482 aa33.99■■■■□ 3.03
LMO2-201ENST00000257818 ANKRD30BQ9BXX2 1392 aa33.99■■■■□ 3.03
LMO2-201ENST00000257818 PRKRIP1Q9H875 184 aaPredicted RBP33.99■■■■□ 3.03
LMO2-201ENST00000257818 MYO5CQ9NQX4 1742 aa33.97■■■■□ 3.03
LMO2-201ENST00000257818 FANCIQ9NVI1 1328 aa33.97■■■■□ 3.03
LMO2-201ENST00000257818 ERICH6BQ5W0A0 696 aa33.97■■■■□ 3.03
LMO2-201ENST00000257818 CCDC141Q6ZP82 1450 aa33.96■■■■□ 3.03
LMO2-201ENST00000257818 SYCP2Q9BX26 1530 aa33.94■■■■□ 3.02
LMO2-201ENST00000257818 NBPF8Q3BBV2 869 aa33.92■■■■□ 3.02
LMO2-201ENST00000257818 RPRD2Q5VT52 1461 aaKnown RBP33.92■■■■□ 3.02
LMO2-201ENST00000257818 KIF15Q9NS87 1388 aa33.91■■■■□ 3.02
LMO2-201ENST00000257818 TEX14Q8IWB6 1497 aa33.91■■■■□ 3.02
LMO2-201ENST00000257818 PPP4R2Q9NY27 417 aa33.9■■■■□ 3.02
LMO2-201ENST00000257818 RSPH4AQ5TD94 716 aa33.9■■■■□ 3.02
LMO2-201ENST00000257818 FAM9BQ8IZU0 186 aa33.88■■■■□ 3.01
LMO2-201ENST00000257818 OSCARQ8IYS5 282 aa33.88■■■■□ 3.01
LMO2-201ENST00000257818 MRS2Q9HD23 443 aa33.87■■■■□ 3.01
LMO2-201ENST00000257818 SPATA31E1Q6ZUB1 1445 aa33.86■■■■□ 3.01
LMO2-201ENST00000257818 BCL11AQ9H165 835 aa33.86■■■■□ 3.01
LMO2-201ENST00000257818 ZBED9Q6R2W3 1325 aa33.85■■■■□ 3.01
LMO2-201ENST00000257818 PLCH2O75038 1416 aa33.84■■■■□ 3.01
LMO2-201ENST00000257818 PKD2Q13563 968 aa33.83■■■■□ 3.01
LMO2-201ENST00000257818 NUP155O75694 1391 aa33.83■■■■□ 3.01
LMO2-201ENST00000257818 KIF7Q2M1P5 1343 aa33.82■■■■□ 3
LMO2-201ENST00000257818 POLR1AO95602 1720 aaPredicted RBP33.82■■■■□ 3
LMO2-201ENST00000257818 KIAA1107Q9UPP5 1409 aa33.8■■■■□ 3
LMO2-201ENST00000257818 ARHGEF12Q9NZN5 1544 aa33.79■■■■□ 3
LMO2-201ENST00000257818 PLEKHH2Q8IVE3 1493 aa33.79■■■■□ 3
LMO2-201ENST00000257818 EFCAB2Q5VUJ9 269 aa33.77■■■■□ 3
LMO2-201ENST00000257818 MAST1Q9Y2H9 1570 aa33.75■■■□□ 2.99
LMO2-201ENST00000257818 WDR7Q9Y4E6 1490 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms