RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 DAPK1P53355 1430 aa13.4□□□□□ -0.26
RPA1-201ENST00000254719 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
RPA1-201ENST00000254719 GPATCH8Q9UKJ3 1502 aaKnown RBP13.4□□□□□ -0.26
RPA1-201ENST00000254719 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
RPA1-201ENST00000254719 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
RPA1-201ENST00000254719 MTUS2Q5JR59 1369 aa13.39□□□□□ -0.27
RPA1-201ENST00000254719 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
RPA1-201ENST00000254719 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
RPA1-201ENST00000254719 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
RPA1-201ENST00000254719 ATP10BO94823 1461 aa13.35□□□□□ -0.27
RPA1-201ENST00000254719 CAMSAP2Q08AD1 1489 aa13.34□□□□□ -0.27
RPA1-201ENST00000254719 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
RPA1-201ENST00000254719 ANKRD30BQ9BXX2 1392 aa13.33□□□□□ -0.28
RPA1-201ENST00000254719 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.28
RPA1-201ENST00000254719 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
RPA1-201ENST00000254719 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
RPA1-201ENST00000254719 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
RPA1-201ENST00000254719 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
RPA1-201ENST00000254719 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
RPA1-201ENST00000254719 FOXD1Q16676 465 aa13.29□□□□□ -0.28
RPA1-201ENST00000254719 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
RPA1-201ENST00000254719 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
RPA1-201ENST00000254719 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
RPA1-201ENST00000254719 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
RPA1-201ENST00000254719 ARID3CA6NKF2 412 aa13.27□□□□□ -0.29
RPA1-201ENST00000254719 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.29
RPA1-201ENST00000254719 KDM5DQ9BY66 1539 aa13.26□□□□□ -0.29
RPA1-201ENST00000254719 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
RPA1-201ENST00000254719 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
RPA1-201ENST00000254719 KDM5CP41229 1560 aa13.24□□□□□ -0.29
RPA1-201ENST00000254719 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
RPA1-201ENST00000254719 PTPRGP23470 1445 aa13.24□□□□□ -0.29
RPA1-201ENST00000254719 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
RPA1-201ENST00000254719 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
RPA1-201ENST00000254719 E9PCH4 1651 aa13.23□□□□□ -0.29
RPA1-201ENST00000254719 CCDC184Q52MB2 194 aa13.22□□□□□ -0.29
RPA1-201ENST00000254719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPA1-201ENST00000254719 ARHGEF5Q12774 1597 aa13.21□□□□□ -0.29
RPA1-201ENST00000254719 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.29
RPA1-201ENST00000254719 ERCC6Q03468 1493 aa13.2□□□□□ -0.3
RPA1-201ENST00000254719 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
RPA1-201ENST00000254719 PLA2R1Q13018 1463 aa13.19□□□□□ -0.3
RPA1-201ENST00000254719 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
RPA1-201ENST00000254719 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
RPA1-201ENST00000254719 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
RPA1-201ENST00000254719 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
RPA1-201ENST00000254719 UNC13BO14795 1591 aa13.17□□□□□ -0.3
RPA1-201ENST00000254719 L3MBTL2Q969R5 705 aa13.16□□□□□ -0.3
RPA1-201ENST00000254719 MAST1Q9Y2H9 1570 aa13.16□□□□□ -0.3
RPA1-201ENST00000254719 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
RPA1-201ENST00000254719 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
RPA1-201ENST00000254719 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
RPA1-201ENST00000254719 BCANQ96GW7 911 aa13.13□□□□□ -0.31
RPA1-201ENST00000254719 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
RPA1-201ENST00000254719 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
RPA1-201ENST00000254719 MYT1Q01538 1121 aa13.12□□□□□ -0.31
RPA1-201ENST00000254719 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
RPA1-201ENST00000254719 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
RPA1-201ENST00000254719 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
RPA1-201ENST00000254719 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
RPA1-201ENST00000254719 IQGAP3Q86VI3 1631 aa13.09□□□□□ -0.31
RPA1-201ENST00000254719 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
RPA1-201ENST00000254719 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
RPA1-201ENST00000254719 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
RPA1-201ENST00000254719 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
RPA1-201ENST00000254719 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
RPA1-201ENST00000254719 FAM135AQ9P2D6 1515 aa13.06□□□□□ -0.32
RPA1-201ENST00000254719 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
RPA1-201ENST00000254719 BCL11AQ9H165 835 aa13.05□□□□□ -0.32
RPA1-201ENST00000254719 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
RPA1-201ENST00000254719 CCDC7Q96M83 1385 aa13.04□□□□□ -0.32
RPA1-201ENST00000254719 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
RPA1-201ENST00000254719 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
RPA1-201ENST00000254719 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.33
RPA1-201ENST00000254719 ABCC1P33527 1531 aa13.02□□□□□ -0.33
RPA1-201ENST00000254719 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
RPA1-201ENST00000254719 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
RPA1-201ENST00000254719 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
RPA1-201ENST00000254719 VWDEQ8N2E2 1590 aa13□□□□□ -0.33
RPA1-201ENST00000254719 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
RPA1-201ENST00000254719 NEFLP07196 543 aa13□□□□□ -0.33
RPA1-201ENST00000254719 LAMC1P11047 1609 aa12.99□□□□□ -0.33
RPA1-201ENST00000254719 IFT172Q9UG01 1749 aa12.98□□□□□ -0.33
RPA1-201ENST00000254719 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
RPA1-201ENST00000254719 MYOM1P52179 1685 aa12.98□□□□□ -0.33
RPA1-201ENST00000254719 A2MP01023 1474 aa12.97□□□□□ -0.33
RPA1-201ENST00000254719 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
RPA1-201ENST00000254719 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
RPA1-201ENST00000254719 HNRNPMP52272 730 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPA1-201ENST00000254719 CFDP1Q9UEE9 299 aaPredicted RBP12.97□□□□□ -0.33
RPA1-201ENST00000254719 ATP10AO60312 1499 aa12.97□□□□□ -0.33
RPA1-201ENST00000254719 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
RPA1-201ENST00000254719 PRDM15P57071 1507 aaPredicted RBP12.96□□□□□ -0.33
RPA1-201ENST00000254719 IQGAP1P46940 1657 aa12.96□□□□□ -0.33
RPA1-201ENST00000254719 CEP152O94986 1710 aa12.96□□□□□ -0.33
RPA1-201ENST00000254719 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
RPA1-201ENST00000254719 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
RPA1-201ENST00000254719 FBLN2P98095 1184 aa12.94□□□□□ -0.34
RPA1-201ENST00000254719 MADDQ8WXG6 1647 aa12.94□□□□□ -0.34
RPA1-201ENST00000254719 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms