RNA–Protein interactions for RNA: ENST00000254037.6

ZCCHC9-201, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC9, Length 4,606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-201ENST00000254037 SMARCA2P51531 1590 aa15.22■□□□□ 0.03
ZCCHC9-201ENST00000254037 GOLGA6L3A6NEY3 463 aa15.21■□□□□ 0.03
ZCCHC9-201ENST00000254037 MS4A1P11836 297 aa15.21■□□□□ 0.03
ZCCHC9-201ENST00000254037 CCER2I3L3R5 266 aa15.2■□□□□ 0.02
ZCCHC9-201ENST00000254037 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
ZCCHC9-201ENST00000254037 NUDCQ9Y266 331 aa15.2■□□□□ 0.02
ZCCHC9-201ENST00000254037 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
ZCCHC9-201ENST00000254037 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
ZCCHC9-201ENST00000254037 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
ZCCHC9-201ENST00000254037 U2SURPO15042 1029 aaKnown RBP15.18■□□□□ 0.02
ZCCHC9-201ENST00000254037 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
ZCCHC9-201ENST00000254037 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
ZCCHC9-201ENST00000254037 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
ZCCHC9-201ENST00000254037 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
ZCCHC9-201ENST00000254037 APBB1O00213 710 aa15.13■□□□□ 0.01
ZCCHC9-201ENST00000254037 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
ZCCHC9-201ENST00000254037 MCCP23508 829 aa15.12■□□□□ 0.01
ZCCHC9-201ENST00000254037 PPP1R15AO75807 674 aaPredicted RBP15.12■□□□□ 0.01
ZCCHC9-201ENST00000254037 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
ZCCHC9-201ENST00000254037 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
ZCCHC9-201ENST00000254037 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
ZCCHC9-201ENST00000254037 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
ZCCHC9-201ENST00000254037 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
ZCCHC9-201ENST00000254037 RAPGEF2Q9Y4G8 1499 aa15.08■□□□□ 0.01
ZCCHC9-201ENST00000254037 PTMSP20962 102 aa15.08■□□□□ 0
ZCCHC9-201ENST00000254037 MFAP1P55081 439 aaKnown RBP15.07■□□□□ 0
ZCCHC9-201ENST00000254037 USP35Q9P2H5 1018 aa15.06■□□□□ 0
ZCCHC9-201ENST00000254037 SYAP1Q96A49 352 aaPredicted RBP15.06■□□□□ 0
ZCCHC9-201ENST00000254037 SLC4A3P48751 1232 aa15.06■□□□□ 0
ZCCHC9-201ENST00000254037 KCNH8Q96L42 1107 aa15.06■□□□□ 0
ZCCHC9-201ENST00000254037 GSE1Q14687 1217 aa15.05■□□□□ 0
ZCCHC9-201ENST00000254037 FOXD4L1Q9NU39 408 aa15.05■□□□□ 0
ZCCHC9-201ENST00000254037 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
ZCCHC9-201ENST00000254037 HSPA5P11021 654 aaKnown RBP15.03■□□□□ -0
ZCCHC9-201ENST00000254037 RWDD1Q9H446 243 aaPredicted RBP15.03■□□□□ -0
ZCCHC9-201ENST00000254037 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
ZCCHC9-201ENST00000254037 KIAA1211Q6ZU35 1233 aa15.02■□□□□ -0
ZCCHC9-201ENST00000254037 CFAP44Q96MT7 982 aa15.02■□□□□ -0
ZCCHC9-201ENST00000254037 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
ZCCHC9-201ENST00000254037 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
ZCCHC9-201ENST00000254037 TMF1P82094 1093 aa15.01□□□□□ -0.01
ZCCHC9-201ENST00000254037 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
ZCCHC9-201ENST00000254037 GNL2Q13823 731 aaKnown RBP15□□□□□ -0.01
ZCCHC9-201ENST00000254037 NOC3LQ8WTT2 800 aaKnown RBP15□□□□□ -0.01
ZCCHC9-201ENST00000254037 GOLGA6L1Q8N7Z2 621 aa15□□□□□ -0.01
ZCCHC9-201ENST00000254037 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
ZCCHC9-201ENST00000254037 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
ZCCHC9-201ENST00000254037 POGKQ9P215 609 aa14.99□□□□□ -0.01
ZCCHC9-201ENST00000254037 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
ZCCHC9-201ENST00000254037 ITPRIPQ8IWB1 547 aa14.98□□□□□ -0.01
ZCCHC9-201ENST00000254037 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
ZCCHC9-201ENST00000254037 FMN1Q68DA7 1419 aa14.97□□□□□ -0.01
ZCCHC9-201ENST00000254037 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
ZCCHC9-201ENST00000254037 FAM13BQ9NYF5 915 aa14.97□□□□□ -0.01
ZCCHC9-201ENST00000254037 NOL8Q76FK4 1167 aaKnown RBP14.96□□□□□ -0.01
ZCCHC9-201ENST00000254037 MORC1Q86VD1 984 aa14.96□□□□□ -0.01
ZCCHC9-201ENST00000254037 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
ZCCHC9-201ENST00000254037 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
ZCCHC9-201ENST00000254037 PDE4AP27815 886 aa14.96□□□□□ -0.02
ZCCHC9-201ENST00000254037 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
ZCCHC9-201ENST00000254037 DDX49Q9Y6V7 483 aaKnown RBP14.95□□□□□ -0.02
ZCCHC9-201ENST00000254037 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
ZCCHC9-201ENST00000254037 CLSTN1O94985 981 aa14.94□□□□□ -0.02
ZCCHC9-201ENST00000254037 SOX12O15370 315 aa14.94□□□□□ -0.02
ZCCHC9-201ENST00000254037 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
ZCCHC9-201ENST00000254037 ZNF771Q7L3S4 317 aaPredicted RBP14.93□□□□□ -0.02
ZCCHC9-201ENST00000254037 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
ZCCHC9-201ENST00000254037 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
ZCCHC9-201ENST00000254037 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
ZCCHC9-201ENST00000254037 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
ZCCHC9-201ENST00000254037 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
ZCCHC9-201ENST00000254037 DDX11L8A8MPP1 907 aa14.91□□□□□ -0.02
ZCCHC9-201ENST00000254037 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
ZCCHC9-201ENST00000254037 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
ZCCHC9-201ENST00000254037 A0A0U1RQG5 324 aaPredicted RBP14.9□□□□□ -0.02
ZCCHC9-201ENST00000254037 TPM4P67936 248 aa14.9□□□□□ -0.02
ZCCHC9-201ENST00000254037 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
ZCCHC9-201ENST00000254037 FANCIQ9NVI1 1328 aa14.89□□□□□ -0.03
ZCCHC9-201ENST00000254037 PDE4CQ08493 712 aa14.89□□□□□ -0.03
ZCCHC9-201ENST00000254037 FOXD1Q16676 465 aa14.88□□□□□ -0.03
ZCCHC9-201ENST00000254037 FOXD4L6Q3SYB3 417 aaPredicted RBP14.88□□□□□ -0.03
ZCCHC9-201ENST00000254037 FOXD4L3Q6VB84 417 aaPredicted RBP14.88□□□□□ -0.03
ZCCHC9-201ENST00000254037 CCAR2Q8N163 923 aaKnown RBP14.88□□□□□ -0.03
ZCCHC9-201ENST00000254037 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
ZCCHC9-201ENST00000254037 NPHP1O15259 732 aa14.88□□□□□ -0.03
ZCCHC9-201ENST00000254037 TRIM6-TRIM34B2RNG4 842 aa14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 SAFB2Q14151 953 aaKnown RBP eCLIP14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 PHF14O94880 888 aa14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 HSP90B1P14625 803 aaKnown RBP14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 MPHOSPH9Q99550 1183 aa14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
ZCCHC9-201ENST00000254037 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
ZCCHC9-201ENST00000254037 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
ZCCHC9-201ENST00000254037 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
ZCCHC9-201ENST00000254037 RALBP1Q15311 655 aa14.85□□□□□ -0.03
ZCCHC9-201ENST00000254037 ST18O60284 1047 aa14.84□□□□□ -0.03
ZCCHC9-201ENST00000254037 TPM3P06753 285 aa14.84□□□□□ -0.03
ZCCHC9-201ENST00000254037 PKD2Q13563 968 aa14.84□□□□□ -0.03
ZCCHC9-201ENST00000254037 FAM43AQ8N2R8 423 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms