RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
UBE4B-201ENST00000253251 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
UBE4B-201ENST00000253251 PNNQ9H307 717 aaKnown RBP19.78■□□□□ 0.76
UBE4B-201ENST00000253251 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
UBE4B-201ENST00000253251 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
UBE4B-201ENST00000253251 MLECQ14165 292 aa19.77■□□□□ 0.76
UBE4B-201ENST00000253251 ROCK2O75116 1388 aaKnown RBP19.76■□□□□ 0.75
UBE4B-201ENST00000253251 DHX57Q6P158 1386 aaKnown RBP19.76■□□□□ 0.75
UBE4B-201ENST00000253251 FOXD1Q16676 465 aa19.75■□□□□ 0.75
UBE4B-201ENST00000253251 MAPK8IP3Q9UPT6 1336 aa19.73■□□□□ 0.75
UBE4B-201ENST00000253251 UACAQ9BZF9 1416 aa19.72■□□□□ 0.75
UBE4B-201ENST00000253251 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
UBE4B-201ENST00000253251 WASHC2CQ9Y4E1 1318 aa19.72■□□□□ 0.75
UBE4B-201ENST00000253251 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
UBE4B-201ENST00000253251 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
UBE4B-201ENST00000253251 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
UBE4B-201ENST00000253251 SYNJ2O15056 1496 aa19.71■□□□□ 0.75
UBE4B-201ENST00000253251 ARAP1Q96P48 1450 aa19.7■□□□□ 0.74
UBE4B-201ENST00000253251 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
UBE4B-201ENST00000253251 UNC13AQ9UPW8 1703 aa19.7■□□□□ 0.74
UBE4B-201ENST00000253251 CCDC144AA2RUR9 1427 aa19.69■□□□□ 0.74
UBE4B-201ENST00000253251 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
UBE4B-201ENST00000253251 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
UBE4B-201ENST00000253251 SRPK2P78362 688 aaKnown RBP19.68■□□□□ 0.74
UBE4B-201ENST00000253251 RALBP1Q15311 655 aa19.67■□□□□ 0.74
UBE4B-201ENST00000253251 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
UBE4B-201ENST00000253251 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
UBE4B-201ENST00000253251 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
UBE4B-201ENST00000253251 STAC3Q96MF2 364 aa19.65■□□□□ 0.74
UBE4B-201ENST00000253251 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.74
UBE4B-201ENST00000253251 PHLDB1Q86UU1 1377 aa19.64■□□□□ 0.74
UBE4B-201ENST00000253251 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
UBE4B-201ENST00000253251 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
UBE4B-201ENST00000253251 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
UBE4B-201ENST00000253251 PPM1GO15355 546 aaPredicted RBP19.63■□□□□ 0.73
UBE4B-201ENST00000253251 NPM2Q86SE8 214 aaKnown RBP19.63■□□□□ 0.73
UBE4B-201ENST00000253251 CUL7Q14999 1698 aa19.63■□□□□ 0.73
UBE4B-201ENST00000253251 MORC1Q86VD1 984 aa19.63■□□□□ 0.73
UBE4B-201ENST00000253251 HAP1P54257 671 aaPredicted RBP19.62■□□□□ 0.73
UBE4B-201ENST00000253251 MS4A1P11836 297 aa19.62■□□□□ 0.73
UBE4B-201ENST00000253251 CHMP4BQ9H444 224 aaKnown RBP19.62■□□□□ 0.73
UBE4B-201ENST00000253251 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
UBE4B-201ENST00000253251 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
UBE4B-201ENST00000253251 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
UBE4B-201ENST00000253251 MIA2Q96PC5 1412 aa19.61■□□□□ 0.73
UBE4B-201ENST00000253251 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
UBE4B-201ENST00000253251 EID1Q9Y6B2 187 aa19.58■□□□□ 0.73
UBE4B-201ENST00000253251 KIF15Q9NS87 1388 aa19.58■□□□□ 0.72
UBE4B-201ENST00000253251 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.72
UBE4B-201ENST00000253251 EIF5BO60841 1220 aaKnown RBP19.57■□□□□ 0.72
UBE4B-201ENST00000253251 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
UBE4B-201ENST00000253251 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
UBE4B-201ENST00000253251 STK26Q9P289 416 aa19.54■□□□□ 0.72
UBE4B-201ENST00000253251 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
UBE4B-201ENST00000253251 VGFO15240 615 aaPredicted RBP19.54■□□□□ 0.72
UBE4B-201ENST00000253251 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
UBE4B-201ENST00000253251 ANKRD50Q9ULJ7 1429 aa19.54■□□□□ 0.72
UBE4B-201ENST00000253251 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
UBE4B-201ENST00000253251 TERF2IPQ9NYB0 399 aa19.53■□□□□ 0.72
UBE4B-201ENST00000253251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.72
UBE4B-201ENST00000253251 TIAM1Q13009 1591 aa19.52■□□□□ 0.72
UBE4B-201ENST00000253251 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
UBE4B-201ENST00000253251 FTSJ3Q8IY81 847 aaKnown RBP19.51■□□□□ 0.71
UBE4B-201ENST00000253251 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
UBE4B-201ENST00000253251 IQGAP2Q13576 1575 aa19.51■□□□□ 0.71
UBE4B-201ENST00000253251 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
UBE4B-201ENST00000253251 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
UBE4B-201ENST00000253251 ARHGAP5Q13017 1502 aa19.49■□□□□ 0.71
UBE4B-201ENST00000253251 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
UBE4B-201ENST00000253251 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
UBE4B-201ENST00000253251 LMOD2Q6P5Q4 547 aa19.48■□□□□ 0.71
UBE4B-201ENST00000253251 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
UBE4B-201ENST00000253251 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
UBE4B-201ENST00000253251 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
UBE4B-201ENST00000253251 CALD1Q05682 793 aaKnown RBP19.45■□□□□ 0.7
UBE4B-201ENST00000253251 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
UBE4B-201ENST00000253251 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
UBE4B-201ENST00000253251 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
UBE4B-201ENST00000253251 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
UBE4B-201ENST00000253251 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
UBE4B-201ENST00000253251 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
UBE4B-201ENST00000253251 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
UBE4B-201ENST00000253251 USP47Q96K76 1375 aa19.4■□□□□ 0.7
UBE4B-201ENST00000253251 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
UBE4B-201ENST00000253251 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
UBE4B-201ENST00000253251 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
UBE4B-201ENST00000253251 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
UBE4B-201ENST00000253251 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
UBE4B-201ENST00000253251 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
UBE4B-201ENST00000253251 HFM1A2PYH4 1435 aa19.38■□□□□ 0.69
UBE4B-201ENST00000253251 A0A0G2JS52 829 aa19.37■□□□□ 0.69
UBE4B-201ENST00000253251 C9orf84Q5VXU9 1444 aa19.37■□□□□ 0.69
UBE4B-201ENST00000253251 EVC2Q86UK5 1308 aa19.36■□□□□ 0.69
UBE4B-201ENST00000253251 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
UBE4B-201ENST00000253251 BECN1Q14457 450 aa19.36■□□□□ 0.69
UBE4B-201ENST00000253251 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
UBE4B-201ENST00000253251 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
UBE4B-201ENST00000253251 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
UBE4B-201ENST00000253251 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.69
UBE4B-201ENST00000253251 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.694e-6■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms