RNA–Protein interactions for RNA: ENST00000252115.9

POLDIP3-201, Transcript of DNA polymerase delta interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLDIP3, Length 3,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-201ENST00000252115 NCOA1Q15788 1441 aa15.24■□□□□ 0.03
POLDIP3-201ENST00000252115 ZNF644Q9H582 1327 aaPredicted RBP15.23■□□□□ 0.03
POLDIP3-201ENST00000252115 SUPT6HQ7KZ85 1726 aaKnown RBP15.23■□□□□ 0.03
POLDIP3-201ENST00000252115 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
POLDIP3-201ENST00000252115 NOP58Q9Y2X3 529 aaKnown RBP15.22■□□□□ 0.03
POLDIP3-201ENST00000252115 CUL7Q14999 1698 aa15.21■□□□□ 0.03
POLDIP3-201ENST00000252115 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
POLDIP3-201ENST00000252115 UGGT2Q9NYU1 1516 aa15.2■□□□□ 0.02
POLDIP3-201ENST00000252115 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
POLDIP3-201ENST00000252115 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
POLDIP3-201ENST00000252115 LAMC3Q9Y6N6 1575 aa15.17■□□□□ 0.02
POLDIP3-201ENST00000252115 ANKRD30BQ9BXX2 1392 aa15.17■□□□□ 0.02
POLDIP3-201ENST00000252115 CDK13Q14004 1512 aaKnown RBP15.17■□□□□ 0.02
POLDIP3-201ENST00000252115 SAMD9Q5K651 1589 aa15.16■□□□□ 0.02
POLDIP3-201ENST00000252115 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
POLDIP3-201ENST00000252115 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
POLDIP3-201ENST00000252115 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
POLDIP3-201ENST00000252115 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
POLDIP3-201ENST00000252115 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
POLDIP3-201ENST00000252115 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
POLDIP3-201ENST00000252115 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
POLDIP3-201ENST00000252115 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
POLDIP3-201ENST00000252115 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
POLDIP3-201ENST00000252115 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
POLDIP3-201ENST00000252115 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
POLDIP3-201ENST00000252115 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
POLDIP3-201ENST00000252115 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
POLDIP3-201ENST00000252115 EPRSP07814 1512 aaKnown RBP15.11■□□□□ 0.01
POLDIP3-201ENST00000252115 SPATA31E1Q6ZUB1 1445 aa15.11■□□□□ 0.01
POLDIP3-201ENST00000252115 PDS5BQ9NTI5 1447 aa15.1■□□□□ 0.01
POLDIP3-201ENST00000252115 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
POLDIP3-201ENST00000252115 KDM2AQ9Y2K7 1162 aa15.1■□□□□ 0.01
POLDIP3-201ENST00000252115 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
POLDIP3-201ENST00000252115 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
POLDIP3-201ENST00000252115 TEX14Q8IWB6 1497 aa15.09■□□□□ 0.01
POLDIP3-201ENST00000252115 MYT1LQ9UL68 1186 aa15.08■□□□□ 0.01
POLDIP3-201ENST00000252115 USP47Q96K76 1375 aa15.08■□□□□ 0
POLDIP3-201ENST00000252115 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0
POLDIP3-201ENST00000252115 DAPK1P53355 1430 aa15.08■□□□□ 0
POLDIP3-201ENST00000252115 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0
POLDIP3-201ENST00000252115 PKD2Q13563 968 aa15.07■□□□□ 0
POLDIP3-201ENST00000252115 MIA2Q96PC5 1412 aa15.07■□□□□ 0
POLDIP3-201ENST00000252115 ABCC5O15440 1437 aa15.07■□□□□ 0
POLDIP3-201ENST00000252115 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
POLDIP3-201ENST00000252115 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
POLDIP3-201ENST00000252115 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ 0
POLDIP3-201ENST00000252115 CARD11Q9BXL7 1154 aa15.04■□□□□ -0
POLDIP3-201ENST00000252115 ABCA5Q8WWZ7 1642 aa15.04■□□□□ -0
POLDIP3-201ENST00000252115 EXOC6Q8TAG9 804 aa15.04■□□□□ -0
POLDIP3-201ENST00000252115 CFDP1Q9UEE9 299 aaPredicted RBP15.04■□□□□ -0
POLDIP3-201ENST00000252115 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
POLDIP3-201ENST00000252115 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
POLDIP3-201ENST00000252115 LAS1LQ9Y4W2 734 aaKnown RBP15.01□□□□□ -0.01
POLDIP3-201ENST00000252115 ROCK1Q13464 1354 aa15□□□□□ -0.01
POLDIP3-201ENST00000252115 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
POLDIP3-201ENST00000252115 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
POLDIP3-201ENST00000252115 RRP1P56182 461 aaKnown RBP14.97□□□□□ -0.01
POLDIP3-201ENST00000252115 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
POLDIP3-201ENST00000252115 PZPP20742 1482 aa14.97□□□□□ -0.01
POLDIP3-201ENST00000252115 BCORL1Q5H9F3 1711 aa14.97□□□□□ -0.01
POLDIP3-201ENST00000252115 IQGAP2Q13576 1575 aa14.96□□□□□ -0.01
POLDIP3-201ENST00000252115 PLIN1O60240 522 aa14.96□□□□□ -0.01
POLDIP3-201ENST00000252115 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
POLDIP3-201ENST00000252115 PRG4Q92954 1404 aaPredicted RBP14.96□□□□□ -0.02
POLDIP3-201ENST00000252115 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
POLDIP3-201ENST00000252115 WDR62O43379 1518 aa14.95□□□□□ -0.02
POLDIP3-201ENST00000252115 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
POLDIP3-201ENST00000252115 KIAA1107Q9UPP5 1409 aa14.94□□□□□ -0.02
POLDIP3-201ENST00000252115 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
POLDIP3-201ENST00000252115 PDE4AP27815 886 aa14.93□□□□□ -0.02
POLDIP3-201ENST00000252115 NUP155O75694 1391 aa14.93□□□□□ -0.02
POLDIP3-201ENST00000252115 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
POLDIP3-201ENST00000252115 KIF15Q9NS87 1388 aa14.92□□□□□ -0.02
POLDIP3-201ENST00000252115 NEFMP07197 916 aa14.91□□□□□ -0.02
POLDIP3-201ENST00000252115 RGL3Q3MIN7 710 aa14.91□□□□□ -0.02
POLDIP3-201ENST00000252115 DNMT1P26358 1616 aaKnown RBP14.91□□□□□ -0.02
POLDIP3-201ENST00000252115 CC2D1BQ5T0F9 858 aaKnown RBP14.9□□□□□ -0.02
POLDIP3-201ENST00000252115 IL27Q8NEV9 243 aa14.9□□□□□ -0.02
POLDIP3-201ENST00000252115 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
POLDIP3-201ENST00000252115 CAMSAP2Q08AD1 1489 aa14.88□□□□□ -0.03
POLDIP3-201ENST00000252115 TCERG1O14776 1098 aaKnown RBP14.88□□□□□ -0.03
POLDIP3-201ENST00000252115 RALBP1Q15311 655 aa14.88□□□□□ -0.03
POLDIP3-201ENST00000252115 ARID4BQ4LE39 1312 aaPredicted RBP14.88□□□□□ -0.03
POLDIP3-201ENST00000252115 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
POLDIP3-201ENST00000252115 ROCK2O75116 1388 aaKnown RBP14.87□□□□□ -0.03
POLDIP3-201ENST00000252115 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
POLDIP3-201ENST00000252115 ANKRD50Q9ULJ7 1429 aa14.87□□□□□ -0.03
POLDIP3-201ENST00000252115 TARBP1Q13395 1621 aaKnown RBP14.86□□□□□ -0.03
POLDIP3-201ENST00000252115 LRPPRCP42704 1394 aaKnown RBP14.86□□□□□ -0.03
POLDIP3-201ENST00000252115 BRD4O60885 1362 aaPredicted RBP14.86□□□□□ -0.03
POLDIP3-201ENST00000252115 BACH2Q9BYV9 841 aa14.86□□□□□ -0.03
POLDIP3-201ENST00000252115 KDM5CP41229 1560 aa14.85□□□□□ -0.03
POLDIP3-201ENST00000252115 POLR1AO95602 1720 aaPredicted RBP14.85□□□□□ -0.03
POLDIP3-201ENST00000252115 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
POLDIP3-201ENST00000252115 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
POLDIP3-201ENST00000252115 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
POLDIP3-201ENST00000252115 NLRP13Q86W25 1043 aa14.85□□□□□ -0.03
POLDIP3-201ENST00000252115 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
POLDIP3-201ENST00000252115 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
POLDIP3-201ENST00000252115 TSPY4P0CV99 314 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms