RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
VIL1-201ENST00000248444 SETD5Q9C0A6 1442 aa13.05□□□□□ -0.32
VIL1-201ENST00000248444 OS9Q13438 667 aaPredicted RBP13.04□□□□□ -0.32
VIL1-201ENST00000248444 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
VIL1-201ENST00000248444 CASC1Q6TDU7 716 aa13.02□□□□□ -0.33
VIL1-201ENST00000248444 RTF1Q92541 710 aaKnown RBP13.01□□□□□ -0.33
VIL1-201ENST00000248444 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
VIL1-201ENST00000248444 MPHOSPH9Q99550 1183 aa13.01□□□□□ -0.33
VIL1-201ENST00000248444 ROCK2O75116 1388 aaKnown RBP13□□□□□ -0.33
VIL1-201ENST00000248444 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
VIL1-201ENST00000248444 PTPRGP23470 1445 aa12.99□□□□□ -0.33
VIL1-201ENST00000248444 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
VIL1-201ENST00000248444 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
VIL1-201ENST00000248444 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
VIL1-201ENST00000248444 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
VIL1-201ENST00000248444 CDK11BP21127 795 aaKnown RBP12.97□□□□□ -0.33
VIL1-201ENST00000248444 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
VIL1-201ENST00000248444 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
VIL1-201ENST00000248444 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.34
VIL1-201ENST00000248444 NGDNQ8NEJ9 315 aaKnown RBP12.95□□□□□ -0.34
VIL1-201ENST00000248444 NBR1Q14596 966 aa12.94□□□□□ -0.34
VIL1-201ENST00000248444 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
VIL1-201ENST00000248444 FAM69CQ0P6D2 419 aa12.94□□□□□ -0.34
VIL1-201ENST00000248444 TPRNQ4KMQ1 711 aa12.93□□□□□ -0.34
VIL1-201ENST00000248444 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
VIL1-201ENST00000248444 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
VIL1-201ENST00000248444 BECN1Q14457 450 aa12.93□□□□□ -0.34
VIL1-201ENST00000248444 EIF3AQ14152 1382 aaKnown RBP12.93□□□□□ -0.34
VIL1-201ENST00000248444 RAB3GAP2Q9H2M9 1393 aa12.92□□□□□ -0.34
VIL1-201ENST00000248444 MS4A1P11836 297 aa12.91□□□□□ -0.34
VIL1-201ENST00000248444 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
VIL1-201ENST00000248444 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
VIL1-201ENST00000248444 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
VIL1-201ENST00000248444 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
VIL1-201ENST00000248444 RGS3P49796 1198 aa12.89□□□□□ -0.35
VIL1-201ENST00000248444 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
VIL1-201ENST00000248444 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
VIL1-201ENST00000248444 KCNJ4P48050 445 aa12.89□□□□□ -0.35
VIL1-201ENST00000248444 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
VIL1-201ENST00000248444 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
VIL1-201ENST00000248444 FGD1P98174 961 aa12.88□□□□□ -0.35
VIL1-201ENST00000248444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
VIL1-201ENST00000248444 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
VIL1-201ENST00000248444 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
VIL1-201ENST00000248444 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
VIL1-201ENST00000248444 DDRGK1Q96HY6 314 aa12.87□□□□□ -0.35
VIL1-201ENST00000248444 AMPHP49418 695 aa12.86□□□□□ -0.35
VIL1-201ENST00000248444 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
VIL1-201ENST00000248444 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■■□□ 17.3
VIL1-201ENST00000248444 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
VIL1-201ENST00000248444 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
VIL1-201ENST00000248444 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
VIL1-201ENST00000248444 GOLGA6L22H0YM25 854 aa12.84□□□□□ -0.35
VIL1-201ENST00000248444 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
VIL1-201ENST00000248444 APBB1O00213 710 aa12.82□□□□□ -0.36
VIL1-201ENST00000248444 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
VIL1-201ENST00000248444 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
VIL1-201ENST00000248444 EVA1CP58658 441 aa12.81□□□□□ -0.36
VIL1-201ENST00000248444 MEX3CQ5U5Q3 659 aaKnown RBP12.8□□□□□ -0.36
VIL1-201ENST00000248444 CCDC144AA2RUR9 1427 aa12.8□□□□□ -0.36
VIL1-201ENST00000248444 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
VIL1-201ENST00000248444 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
VIL1-201ENST00000248444 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
VIL1-201ENST00000248444 RALBP1Q15311 655 aa12.78□□□□□ -0.36
VIL1-201ENST00000248444 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
VIL1-201ENST00000248444 STK31Q9BXU1 1019 aa12.77□□□□□ -0.36
VIL1-201ENST00000248444 UACAQ9BZF9 1416 aa12.77□□□□□ -0.36
VIL1-201ENST00000248444 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
VIL1-201ENST00000248444 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
VIL1-201ENST00000248444 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
VIL1-201ENST00000248444 G3V3G9 751 aa12.76□□□□□ -0.37
VIL1-201ENST00000248444 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
VIL1-201ENST00000248444 PPP4R2Q9NY27 417 aa12.76□□□□□ -0.37
VIL1-201ENST00000248444 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
VIL1-201ENST00000248444 IGF1RP08069 1367 aa12.75□□□□□ -0.37
VIL1-201ENST00000248444 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
VIL1-201ENST00000248444 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
VIL1-201ENST00000248444 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
VIL1-201ENST00000248444 COG3Q96JB2 828 aa12.73□□□□□ -0.37
VIL1-201ENST00000248444 MSH5O43196 834 aa12.73□□□□□ -0.37
VIL1-201ENST00000248444 GTF2E1P29083 439 aaPredicted RBP12.73□□□□□ -0.37
VIL1-201ENST00000248444 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
VIL1-201ENST00000248444 MCCP23508 829 aa12.72□□□□□ -0.37
VIL1-201ENST00000248444 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
VIL1-201ENST00000248444 PSME1Q06323 249 aa12.72□□□□□ -0.37
VIL1-201ENST00000248444 EVC2Q86UK5 1308 aa12.72□□□□□ -0.37
VIL1-201ENST00000248444 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
VIL1-201ENST00000248444 NESP48681 1621 aa12.72□□□□□ -0.37
VIL1-201ENST00000248444 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
VIL1-201ENST00000248444 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.38
VIL1-201ENST00000248444 C1orf141Q5JVX7 400 aa12.71□□□□□ -0.38
VIL1-201ENST00000248444 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
VIL1-201ENST00000248444 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
VIL1-201ENST00000248444 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
VIL1-201ENST00000248444 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
VIL1-201ENST00000248444 SMC4Q9NTJ3 1288 aa12.7□□□□□ -0.38
VIL1-201ENST00000248444 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
VIL1-201ENST00000248444 CLSTN1O94985 981 aa12.69□□□□□ -0.38
VIL1-201ENST00000248444 ATF3P18847 181 aa12.69□□□□□ -0.38
VIL1-201ENST00000248444 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms